Non-Coding RNA Search

Ss1.1-Ova1-OVRM10102B06.5

Sequence:


               
               TTCCTCCTTCCGACCTGAAGGCTGCTTCCCAAGCGCGGGACGCCGCTGACGTCTGTTATT
CGGATTTCGCTGCGCCGTTTTGGTTCGGGAGCCCGTTGGCGTCGGCGACGGTGACGAGAA
GCCCCGAGACAAGAGTTAATTGAGAGTTGGAGGCAAACTTGCTGAAGATGAAGAATATGC
AATATTAGAGGAGATTTTTTTCTTTTTCCTTTGAAAAGTCTCATTTGTTTGGTGGCTTGC
CTCTAGTTACCATTTTTTTCAGTTGAATCTCTTTGCTTCATCAGAAATGATTTTTACAAT
CTCAAGAAAAAATATGTCCCAGAAATTGAGTTTACTGTTGCTTATATTTGGACTCATTTG
GGGATTGATGTTACTGCATTATACATTTCAACAACCAAGACATCAAAGCAGTGTCAAGTT
ACGTGAACAAATACTAGATTTAAGCAAAAGATATGTTAAAGCTCTAGCAGAGGAAAATAA
GAACACAGTGGATGTCGAGAATGGCGCTTCTATGGCAGGATATGCGGATCTGAAAAGAAC
AATTGCTGTCCTTTTGGATGACATTTTACAACGTTTGGTAAAGCTGGAGAACAAAGTTGA
CTATATTGTTGTGAACGGCTCAGCAACCAACACTACCAATGGTACTAGTGGGAGTCTGGT
GCCGGTGACGACAAATAAAAGGATAAATGCATCCGGCAGCATTAGATAGCAGTTGAAGAT
CACCTTGTGCTGCTACATTAACCATGGAATATATTCTAATGGCAGAAAAGCTTTTCAGTT
GCTGGCTAGGATAGAGTAATACTTTACAATAAAAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCCTCCTTCCGACCTGAAGGCTGCTTCCCAAGCGCGGGACGCCGCTGACGTCTGTTATT
CGGATTTCGCTGCGCCGTTTTGGTTCGGGAGCCCGTTGGCGTCGGCGACGGTGACGAGAA
GCCCCGAGACAAGAGTTAATTGAGAGTTGGAGGCAAACTTGCTGAAGATGAAGAATATGC
AATATTAGAGGAGATTTTTTTCTTTTTCCTTTGAAAAGTCTCATTTGTTTGGTGGCTTGC
CTCTAGTTACCATTTTTTTCAGTTGAATCTCTTTGCTTCATCAGAAATGATTTTTACAAT
CTCAAGAAAAAATATGTCCCAGAAATTGAGTTTACTGTTGCTTATATTTGGACTCATTTG
GGGATTGATGTTACTGCATTATACATTTCAACAACCAAGACATCAAAGCAGTGTCAAGTT
ACGTGAACAAATACTAGATTTAAGCAAAAGATATGTTAAAGCTCTAGCAGAGGAAAATAA
GAACACAGTGGATGTCGAGAATGGCGCTTCTATGGCAGGATATGCGGATCTGAAAAGAAC
AATTGCTGTCCTTTTGGATGACATTTTACAACGTTTGGTAAAGCTGGAGAACAAAGTTGA
CTATATTGTTGTGAACGGCTCAGCAACCAACACTACCAATGGTACTAGTGGGAGTCTGGT
GCCGGTGACGACAAATAAAAGGATAAATGCATCCGGCAGCATTAGATAGCAGTTGAAGAT
CACCTTGTGCTGCTACATTAACCATGGAATATATTCTAATGGCAGAAAAGCTTTTCAGTT
GCTGGCTAGGATAGAGTAATACTTTACAATAAAAGC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               Q96EE4_HUMAN

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               Q96EE4_HUMAN

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               132-524, gnl|bosTau2|chr4 (12268946-12269327)
               

               
               132-524, gnl|Hg17|chr7 (23424028-23424412)
               

               
               132-524, gnl|Mm7|chr6 (49293959-49294347)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               132-524, gnl|bosTau2|chr4 (12268946-12269327)
               

               
               132-524, gnl|Hg17|chr7 (23424028-23424412)
               

               
               132-524, gnl|Mm7|chr6 (49293959-49294347)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               nlu (0.191681)
               

               
               kid (0.129735)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)
               

               
               kid (0.129735)

	132-524, gnl\|bosTau2\|chr4 (12268946-12269327)
	132-524, gnl\|Hg17\|chr7 (23424028-23424412)
	132-524, gnl\|Mm7\|chr6 (49293959-49294347)