Ss1.1-Ova1-OVRM10103C06.5
|
AGAAGGGAGAGTCGGAGTGTCAGTATTACGTTGACAAGCTGGAGTACCTGGACGAAAGGC
AGAAGGACCCCAGGATTGAAGCAAGCAAGGTCTTGCTTTGCCACGGGGAGCTGAAGAACA
AGAACGGACACAAACTTTACATTTTCCTGTTTCAAGACATCTTGGTTTTGACTCGGCCTG
TGACTCGCAGCGAGCGTCCCTCCTACCAGGTTTACCGGCAGCCGATCCCGGTGGAGGAGC
TGGTCCTGGAGGACCTGCCGGACGGGGACGTGAGGATGGGAGGGTCCTTTCGAGGGGCTT
TCGGCACCTCCGATAAAGCCAAAAACATCTTTCGCGTTCGCTTCCAAGACGCCTCTGCAG
GCCAGTCCCACACTCTCCAGGCCAACGACGTGTTCCACAAGCAGCAGTGGTTCAGCTGCA
TCCGCGCCGCCATCGCCCCTTTCCGGCGGGCCGCCAGTCCCTCGGAGCTGCGGGGTGTGC
CAGAGCTGCACGAGGAGTACGGGGAGAACCACCCTCCTGCTCCCGCCGGGGGCACCAGGG
CCCAGAGACGGGCATCCACGGCGGCCAGCCTGACGCAGGTCGAAGTTGACGGAGAAGCTC
CCCGGGGCGGCCCCCCGGCGCCCA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGAAGGGAGAGTCGGAGTGTCAGTATTACGTTGACAAGCTGGAGTACCTGGACGAAAGGC
AGAAGGACCCCAGGATTGAAGCAAGCAAGGTCTTGCTTTGCCACGGGGAGCTGAAGAACA
AGAACGGACACAAACTTTACATTTTCCTGTTTCAAGACATCTTGGTTTTGACTCGGCCTG
TGACTCGCAGCGAGCGTCCCTCCTACCAGGTTTACCGGCAGCCGATCCCGGTGGAGGAGC
TGGTCCTGGAGGACCTGCCGGACGGGGACGTGAGGATGGGAGGGTCCTTTCGAGGGGCTT
TCGGCACCTCCGATAAAGCCAAAAACATCTTTCGCGTTCGCTTCCAAGACGCCTCTGCAG
GCCAGTCCCACACTCTCCAGGCCAACGACGTGTTCCACAAGCAGCAGTGGTTCAGCTGCA
TCCGCGCCGCCATCGCCCCTTTCCGGCGGGCCGCCAGTCCCTCGGAGCTGCGGGGTGTGC
CAGAGCTGCACGAGGAGTACGGGGAGAACCACCCTCCTGCTCCCGCCGGGGGCACCAGGG
CCCAGAGACGGGCATCCACGGCGGCCAGCCTGACGCAGGTCGAAGTTGACGGAGAAGCTC
CCCGGGGCGGCCCCCCGGCGCCCA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
129-318, gnl|bosTau2|chr13 (29037334-29037523) |
|
129-318, gnl|canFam2|chr2 (33294326-33294181) |
|
129-318, gnl|danRer3|chr4 (7734051-7734191) |
|
129-318, gnl|dasNov1|scaffold_12151 (4189-4046) |
|
129-318, gnl|echTel1|scaffold_192860 (8449-8307) |
|
129-318, gnl|fr1|chrUn (255300862-255300998) |
|
129-318, gnl|galGal2|chr14 (15016958-15016821) |
|
129-318, gnl|hg17|chr10 (5488024-5488165) |
|
129-318, gnl|Hg17|chr10 (5488047-5488236) |
|
129-318, gnl|mm7|chr13 (3769403-3769245) |
|
129-318, gnl|Mm7|chr13 (3769361-3769172) |
|
129-318, gnl|monDom2|scaffold_31 (28566070-28566216) |
|
129-318, gnl|oryCun1|scaffold_173345 (43658-43512) |
|
129-318, gnl|panTro1|chr8 (5622354-5622495) |
|
129-318, gnl|rheMac2|chr9 (5735157-5735302) |
|
129-318, gnl|rn3|chr17 (77551746-77551902) |
|
129-318, gnl|tetNig1|chrUn_random (48781689-48781820) |
|
129-318, gnl|xenTro1|scaffold_20 (607355-607217) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
129-318, gnl|bosTau2|chr13 (29037334-29037523) |
|
129-318, gnl|canFam2|chr2 (33294326-33294181) |
|
129-318, gnl|danRer3|chr4 (7734051-7734191) |
|
129-318, gnl|dasNov1|scaffold_12151 (4189-4046) |
|
129-318, gnl|echTel1|scaffold_192860 (8449-8307) |
|
129-318, gnl|fr1|chrUn (255300862-255300998) |
|
129-318, gnl|galGal2|chr14 (15016958-15016821) |
|
129-318, gnl|hg17|chr10 (5488024-5488165) |
|
129-318, gnl|Hg17|chr10 (5488047-5488236) |
|
129-318, gnl|mm7|chr13 (3769403-3769245) |
|
129-318, gnl|Mm7|chr13 (3769361-3769172) |
|
129-318, gnl|monDom2|scaffold_31 (28566070-28566216) |
|
129-318, gnl|oryCun1|scaffold_173345 (43658-43512) |
|
129-318, gnl|panTro1|chr8 (5622354-5622495) |
|
129-318, gnl|rheMac2|chr9 (5735157-5735302) |
|
129-318, gnl|rn3|chr17 (77551746-77551902) |
|
129-318, gnl|tetNig1|chrUn_random (48781689-48781820) |
|
129-318, gnl|xenTro1|scaffold_20 (607355-607217) |
|
mcp (0.170648) |
|
ese (0.126502) |
|
cty (0.10408) |
|
mcp (0.170648) |
|
ese (0.126502) |
|
cty (0.10408) |
