Non-Coding RNA Search

Ss1.1-Ova1-OVRM10109F03.5

Sequence:


               
               TTGGAGCGGCCGCAGAGGGTGCTGCCGCCCGAGGCGAGGTCGGGCCGCCCCGCGCGGAAG
AACCGCCCCCAGCGGCAGTAGCACCACCGTCTAGCTAAGAATTCCAGTTCACGCCCGGAA
CTGCAGCTGCAGTATGGATTCTTCCAGTTCATCCAACTCTTGTTTCTCCGTTGGCTCCAC
CAGTCCCGGCGCTGTCTTGCTCCTCTACTCGAAGGAGCGCAAAAAGTGGGATGAGTTTGA
AGATATTTTGGAGGAGAGGAGGCATGTCAGTGACTTGAAATTTGCAATGAAATGCTACAC
ACCTCTAGTCTATAAGGGAATTACTCCTTGCAAGCCAAGTGACATTAAATACAGTGTTCT
CAATTCTGAAGAGGTTCATTATGTCATTAAACAGCTTTGCAGGGAATCCCTCCAGTCTGT
GGAGGTCCTCCAAGAAGAGGCCTGTGAGATCCTCGATGAGATGAGCCACAAACTGCATCT
GGGAGCCATTCGGTTTTTCGCCTTTGCCCTGAGCAAAATATTTAAACAGATTTTCTCGAA
AGTGTGTGTAAATGAAGAAGGTATTCAGAAACTACAGCGGGCCATCCAGGAACATCCCGT
TGTTCTGCTGCCCAGTCATAGAAGTTACATTGACTTCCTGATGCTGTCTTTCCTTTTATA
CAACTACGAATTACCTGTGCCGGTCATAGCTGCAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGGAGCGGCCGCAGAGGGTGCTGCCGCCCGAGGCGAGGTCGGGCCGCCCCGCGCGGAAG
AACCGCCCCCAGCGGCAGTAGCACCACCGTCTAGCTAAGAATTCCAGTTCACGCCCGGAA
CTGCAGCTGCAGTATGGATTCTTCCAGTTCATCCAACTCTTGTTTCTCCGTTGGCTCCAC
CAGTCCCGGCGCTGTCTTGCTCCTCTACTCGAAGGAGCGCAAAAAGTGGGATGAGTTTGA
AGATATTTTGGAGGAGAGGAGGCATGTCAGTGACTTGAAATTTGCAATGAAATGCTACAC
ACCTCTAGTCTATAAGGGAATTACTCCTTGCAAGCCAAGTGACATTAAATACAGTGTTCT
CAATTCTGAAGAGGTTCATTATGTCATTAAACAGCTTTGCAGGGAATCCCTCCAGTCTGT
GGAGGTCCTCCAAGAAGAGGCCTGTGAGATCCTCGATGAGATGAGCCACAAACTGCATCT
GGGAGCCATTCGGTTTTTCGCCTTTGCCCTGAGCAAAATATTTAAACAGATTTTCTCGAA
AGTGTGTGTAAATGAAGAAGGTATTCAGAAACTACAGCGGGCCATCCAGGAACATCCCGT
TGTTCTGCTGCCCAGTCATAGAAGTTACATTGACTTCCTGATGCTGTCTTTCCTTTTATA
CAACTACGAATTACCTGTGCCGGTCATAGCTGCAGG

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               138-394, gnl|bosTau2|chr23 (23525776-23526027)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               138-394, gnl|bosTau2|chr23 (23525776-23526027)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eep (0.122564)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)
               

               
               ebs (0.118301)