Ss1.1-Ova1-OVRM10109F04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGGGAAGCGGAGACGCCAGCAGCTGGGTTTTCGGGAACTAAGGTAGAGGCATAACTGTT GTCGCGGCGAAGCAAGTCAAGACGCACCTACGGCCGTCCAGGCTAGTTTTGGGTCTCGGT AGTCTGTGAAGATGGTGTTGCTCACGATGATCGCCCGGGTGGCGGACGGGCTCCCGTTGG CCGCTTCGATGCAGGAGGACGAACAGTCTGGCCGGGACCTTCAGCAGTACCAAAGTCAGG CTAAGCAACTCTTTCGAAAGTTGAATGAACAGTCCCCTACCAGATGCACCTTGGAAGCTG GCGCCATGACTTTTCACTACATTATTGAACAGGGGGTATGTTATTTGGTTTTGTGTGAAG CTGCCTTCCCTAAGAAGTTGGCTTTTGCGTACCTAGAAGATTTGCACTCAGAGTTTGATG AACAGCATGGGAAAAAGGTTCCGACTGTGTCTAGACCCTATTCCTTTATTGAGTTTGATA CCTACATTCAGAAAACCAAGAAGCTCTACATTGACAGTCGTGCTCGGAGAAACTTAGGTT CCATCAATACTGAATTGCAAGATGTGCAGAGGATCATGGTGGCCAATATTGAGGAAGTGT TACAACGGGGAGAAGCACTTTCAGCATTGGATTCGAAGGCTAACAATTTGTCCAGTCTGT CAAAGAAATACCGCCAGGATGCGAAGTACTTGAACATGCGTTCCACTTACGCCAAACTTG CAGCAGTAGCTGTATTTTTCATCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGGGAAGCGGAGACGCCAGCAGCTGGGTTTTCGGGAACTAAGGTAGAGGCATAACTGTT GTCGCGGCGAAGCAAGTCAAGACGCACCTACGGCCGTCCAGGCTAGTTTTGGGTCTCGGT AGTCTGTGAAGATGGTGTTGCTCACGATGATCGCCCGGGTGGCGGACGGGCTCCCGTTGG CCGCTTCGATGCAGGAGGACGAACAGTCTGGCCGGGACCTTCAGCAGTACCAAAGTCAGG CTAAGCAACTCTTTCGAAAGTTGAATGAACAGTCCCCTACCAGATGCACCTTGGAAGCTG GCGCCATGACTTTTCACTACATTATTGAACAGGGGGTATGTTATTTGGTTTTGTGTGAAG CTGCCTTCCCTAAGAAGTTGGCTTTTGCGTACCTAGAAGATTTGCACTCAGAGTTTGATG AACAGCATGGGAAAAAGGTTCCGACTGTGTCTAGACCCTATTCCTTTATTGAGTTTGATA CCTACATTCAGAAAACCAAGAAGCTCTACATTGACAGTCGTGCTCGGAGAAACTTAGGTT CCATCAATACTGAATTGCAAGATGTGCAGAGGATCATGGTGGCCAATATTGAGGAAGTGT TACAACGGGGAGAAGCACTTTCAGCATTGGATTCGAAGGCTAACAATTTGTCCAGTCTGT CAAAGAAATACCGCCAGGATGCGAAGTACTTGAACATGCGTTCCACTTACGCCAAACTTG CAGCAGTAGCTGTATTTTTCATCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-206, gnl|bosTau2|chr3 (18210723-18210928) | |
| 1-206, gnl|Hg17|chr1 (142585458-142585665) | |
| 1-206, gnl|Mm7|chr3 (97772519-97772711) | |
| 307-480, gnl|bosTau2|chr3 (18223776-18223950) | |
| 307-480, gnl|Hg17|chr1 (142598557-142598731) | |
| 307-480, gnl|Mm7|chr3 (97783863-97784033) | |
| 622-744, gnl|bosTau2|chr3 (18229933-18230055) | |
| 622-744, gnl|canFam2|chr17 (60171637-60171469) | |
| 622-744, gnl|danRer3|chr8 (13011830-13011662) | |
| 622-744, gnl|dasNov1|scaffold_194802 (1980-1811) | |
| 622-744, gnl|echTel1|scaffold_201949 (10149-10317) | |
| 622-744, gnl|fr1|chrUn (321290037-321289871) | |
| 622-744, gnl|galGal2|chr8 (4074234-4074400) | |
| 622-744, gnl|hg17|chr1 (142604777-142604945) | |
| 622-744, gnl|Hg17|chr1 (142604776-142604898) | |
| 622-744, gnl|loxAfr1|scaffold_128476 (4249-4081) | |
| 622-744, gnl|mm7|chr3 (97792405-97792572) | |
| 622-744, gnl|Mm7|chr3 (97792404-97792526) | |
| 622-744, gnl|monDom2|scaffold_44 (591789-591621) | |
| 622-744, gnl|oryCun1|scaffold_212046 (255370-255202) | |
| 622-744, gnl|panTro1|chr1 (125072762-125072932) | |
| 622-744, gnl|rheMac2|chr1 (123078423-123078255) | |
| 622-744, gnl|rn3|chr2 (192725918-192726087) | |
| 622-744, gnl|tetNig1|chrUn_random (42313035-42313192) | |
| 622-744, gnl|xenTro1|scaffold_608 (664959-664791) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-206, gnl|bosTau2|chr3 (18210723-18210928) | |
| 1-206, gnl|Hg17|chr1 (142585458-142585665) | |
| 1-206, gnl|Mm7|chr3 (97772519-97772711) | |
| 307-480, gnl|bosTau2|chr3 (18223776-18223950) | |
| 307-480, gnl|Hg17|chr1 (142598557-142598731) | |
| 307-480, gnl|Mm7|chr3 (97783863-97784033) | |
| 622-744, gnl|bosTau2|chr3 (18229933-18230055) | |
| 622-744, gnl|canFam2|chr17 (60171637-60171469) | |
| 622-744, gnl|danRer3|chr8 (13011830-13011662) | |
| 622-744, gnl|dasNov1|scaffold_194802 (1980-1811) | |
| 622-744, gnl|echTel1|scaffold_201949 (10149-10317) | |
| 622-744, gnl|fr1|chrUn (321290037-321289871) | |
| 622-744, gnl|galGal2|chr8 (4074234-4074400) | |
| 622-744, gnl|hg17|chr1 (142604777-142604945) | |
| 622-744, gnl|Hg17|chr1 (142604776-142604898) | |
| 622-744, gnl|loxAfr1|scaffold_128476 (4249-4081) | |
| 622-744, gnl|mm7|chr3 (97792405-97792572) | |
| 622-744, gnl|Mm7|chr3 (97792404-97792526) | |
| 622-744, gnl|monDom2|scaffold_44 (591789-591621) | |
| 622-744, gnl|oryCun1|scaffold_212046 (255370-255202) | |
| 622-744, gnl|panTro1|chr1 (125072762-125072932) | |
| 622-744, gnl|rheMac2|chr1 (123078423-123078255) | |
| 622-744, gnl|rn3|chr2 (192725918-192726087) | |
| 622-744, gnl|tetNig1|chrUn_random (42313035-42313192) | |
| 622-744, gnl|xenTro1|scaffold_608 (664959-664791) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| clu (0.478583) | |
| cty (0.20816) | |
| cut (0.169924) | |
| pty (0.142714) | |
| pgl (0.118483) | |
| ecc (0.115035) | |
| eje (0.0988338) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (0.478583) | |
| cty (0.20816) | |
| cut (0.169924) | |
| pty (0.142714) | |
| pgl (0.118483) | |
| ecc (0.115035) | |
| eje (0.0988338) |