Non-Coding RNA Search

Ss1.1-Ova1-OVRM10110D03.5

Sequence:


               
               GTGGGGCCGCTGCTGCTGGGATCCAGGCCGGGCTGGAGGACTGGCATCTGGATCGAACCG
CGGGTCCCAGGCGGCCGAGGTCAGTCCCTGCAGGTGTCAGCCAGCTCCCAAGAGCAGAAT
GGATCTTGACGTGGTTAACATGTTTGTGATCGCGGGTGGGACGCTGGCCATCCCGATCCT
GGCATTTGTAGCCTCATTTCTCCTGTGGCCTTCAGCGCTGATAAGAATCTATTACTGGTA
CTGGCGGAGGGCGCTGGGCATGCAGGTCCGCTATGTTCACCACGAGGACTATCAGTTCTG
CTACTCCTTCCGAGGCAGGCCTGGGCACAAGCCTTCCATCCTCATGCTCCACGGATTCTC
TGCGCACAAGGACATGTGGCTTAGCGTGGTCAAGTTCCTTCCAAAGAACCTGCACTTGAT
CTGCGTGGACATGCCAGGACATGAGGGCACCACCCGTTCCTCCCTGGATGACCTGTCCAT
AGATGGGCAAGTCAAGAGGATACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGGGGCCGCTGCTGCTGGGATCCAGGCCGGGCTGGAGGACTGGCATCTGGATCGAACCG
CGGGTCCCAGGCGGCCGAGGTCAGTCCCTGCAGGTGTCAGCCAGCTCCCAAGAGCAGAAT
GGATCTTGACGTGGTTAACATGTTTGTGATCGCGGGTGGGACGCTGGCCATCCCGATCCT
GGCATTTGTAGCCTCATTTCTCCTGTGGCCTTCAGCGCTGATAAGAATCTATTACTGGTA
CTGGCGGAGGGCGCTGGGCATGCAGGTCCGCTATGTTCACCACGAGGACTATCAGTTCTG
CTACTCCTTCCGAGGCAGGCCTGGGCACAAGCCTTCCATCCTCATGCTCCACGGATTCTC
TGCGCACAAGGACATGTGGCTTAGCGTGGTCAAGTTCCTTCCAAAGAACCTGCACTTGAT
CTGCGTGGACATGCCAGGACATGAGGGCACCACCCGTTCCTCCCTGGATGACCTGTCCAT
AGATGGGCAAGTCAAGAGGATACA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               81-240, gnl|bosTau2|chr22 (31931503-31931662)
               

               
               81-240, gnl|Hg17|chr3 (58217316-58217475)
               

               
               81-240, gnl|Mm7|chr14 (5838306-5838465)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               81-240, gnl|bosTau2|chr22 (31931503-31931662)
               

               
               81-240, gnl|Hg17|chr3 (58217316-58217475)
               

               
               81-240, gnl|Mm7|chr14 (5838306-5838465)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nje (0.16592)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nje (0.16592)

	81-240, gnl\|bosTau2\|chr22 (31931503-31931662)
	81-240, gnl\|Hg17\|chr3 (58217316-58217475)
	81-240, gnl\|Mm7\|chr14 (5838306-5838465)