Ss1.1-Ova1-OVRM10111A05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAACTGCTCCCGCGTCACAGCGCCAGGCGCGGCGGGGAGATGCGGCTCCTGGCGCTGAC GGCGGCCGTGCTGCTGGCGCGGGCTCCAGCCCCGGAGGTCTGTGGGGCCCTCAATGTCAC CGTGTCTCCAGGACCCGTGGTTGACTATCTGGAAGGGGAAAATGCCACACTTCTCTGCCA TGTCTCCCAGAAGAGACGGAAGGACAGCTTGCTGGCCGTGCGCTGGTTCTTCGCGCGCCC AGATGCCCAGGAGGTCCTGATGGTTAAGATGACCAAGCTCCGGATGGTGCAGTACTACGG GAACTTCAGCCGCAGCGCCTATCGGCAGAGGCTGCGCCTCCTCGAGCAGCGGCGCGGCAC CCTCTACACGCTCTCTGTCCTGACCCTCCGGCCAGCGGATCAAGGGCACTACGTCTGTAA AGTCCAGGAAATCAGCAAGCACCGGAATAAGTGGACGGCCTGGTCCAACGGCTCCTCGGC AACAGAAATGAGAGTGATTTCCCTCAAAGCTTCTGAAGATTCATCCTTTGAGAAAAAGAA AGAGACCTGGGCATTTTTTGAAGATCTCTACGTGTATGCCGTGCTCGTGTGCTGTGTGGG GATTCTCAGCGTCCTGCTCTTCACCCTGACCATCATCTGGCAGTCTTTGTTTAGCAAGAG GAAATCCAGAGTGAGACACTATTTGGTGAAATGTCCTCAGAACAGCTCAGGGGAGACCGT CACCAGCGTGACCAGCTTGGCCCCACTGCAGCCCAAGAAGGGTAAGAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAACTGCTCCCGCGTCACAGCGCCAGGCGCGGCGGGGAGATGCGGCTCCTGGCGCTGAC GGCGGCCGTGCTGCTGGCGCGGGCTCCAGCCCCGGAGGTCTGTGGGGCCCTCAATGTCAC CGTGTCTCCAGGACCCGTGGTTGACTATCTGGAAGGGGAAAATGCCACACTTCTCTGCCA TGTCTCCCAGAAGAGACGGAAGGACAGCTTGCTGGCCGTGCGCTGGTTCTTCGCGCGCCC AGATGCCCAGGAGGTCCTGATGGTTAAGATGACCAAGCTCCGGATGGTGCAGTACTACGG GAACTTCAGCCGCAGCGCCTATCGGCAGAGGCTGCGCCTCCTCGAGCAGCGGCGCGGCAC CCTCTACACGCTCTCTGTCCTGACCCTCCGGCCAGCGGATCAAGGGCACTACGTCTGTAA AGTCCAGGAAATCAGCAAGCACCGGAATAAGTGGACGGCCTGGTCCAACGGCTCCTCGGC AACAGAAATGAGAGTGATTTCCCTCAAAGCTTCTGAAGATTCATCCTTTGAGAAAAAGAA AGAGACCTGGGCATTTTTTGAAGATCTCTACGTGTATGCCGTGCTCGTGTGCTGTGTGGG GATTCTCAGCGTCCTGCTCTTCACCCTGACCATCATCTGGCAGTCTTTGTTTAGCAAGAG GAAATCCAGAGTGAGACACTATTTGGTGAAATGTCCTCAGAACAGCTCAGGGGAGACCGT CACCAGCGTGACCAGCTTGGCCCCACTGCAGCCCAAGAAGGGTAAGAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 95-494, gnl|bosTau2|chr28 (33452371-33452770) | |
| 95-494, gnl|canFam2|chr28 (4023046-4023469) | |
| 95-494, gnl|danRer3|chr13 (32032427-32032006) | |
| 95-494, gnl|dasNov1|scaffold_11623 (23198-23619) | |
| 95-494, gnl|echTel1|scaffold_318473 (51116-51540) | |
| 95-494, gnl|fr1|chrUn (16420085-16420545) | |
| 95-494, gnl|galGal2|chr6 (17754054-17754492) | |
| 95-494, gnl|hg17|chr10 (49985641-49986071) | |
| 95-494, gnl|Hg17|chr10 (49986047-49985645) | |
| 95-494, gnl|loxAfr1|scaffold_4399 (24445-24021) | |
| 95-494, gnl|mm7|chr14 (30295287-30294863) | |
| 95-494, gnl|Mm7|chr14 (30294882-30295281) | |
| 95-494, gnl|monDom2|scaffold_14 (20387000-20387423) | |
| 95-494, gnl|oryCun1|scaffold_136772 (6476-6053) | |
| 95-494, gnl|panTro1|chr8 (50318359-50318789) | |
| 95-494, gnl|rheMac2|chr9 (47506222-47505792) | |
| 95-494, gnl|rn3|chr16 (8389168-8388748) | |
| 562-671, gnl|bosTau2|chr28 (33477394-33477503) | |
| 562-671, gnl|Hg17|chr10 (49955379-49955270) | |
| 562-671, gnl|Mm7|chr14 (30323974-30324083) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 95-494, gnl|bosTau2|chr28 (33452371-33452770) | |
| 95-494, gnl|canFam2|chr28 (4023046-4023469) | |
| 95-494, gnl|danRer3|chr13 (32032427-32032006) | |
| 95-494, gnl|dasNov1|scaffold_11623 (23198-23619) | |
| 95-494, gnl|echTel1|scaffold_318473 (51116-51540) | |
| 95-494, gnl|fr1|chrUn (16420085-16420545) | |
| 95-494, gnl|galGal2|chr6 (17754054-17754492) | |
| 95-494, gnl|hg17|chr10 (49985641-49986071) | |
| 95-494, gnl|Hg17|chr10 (49986047-49985645) | |
| 95-494, gnl|loxAfr1|scaffold_4399 (24445-24021) | |
| 95-494, gnl|mm7|chr14 (30295287-30294863) | |
| 95-494, gnl|Mm7|chr14 (30294882-30295281) | |
| 95-494, gnl|monDom2|scaffold_14 (20387000-20387423) | |
| 95-494, gnl|oryCun1|scaffold_136772 (6476-6053) | |
| 95-494, gnl|panTro1|chr8 (50318359-50318789) | |
| 95-494, gnl|rheMac2|chr9 (47506222-47505792) | |
| 95-494, gnl|rn3|chr16 (8389168-8388748) | |
| 562-671, gnl|bosTau2|chr28 (33477394-33477503) | |
| 562-671, gnl|Hg17|chr10 (49955379-49955270) | |
| 562-671, gnl|Mm7|chr14 (30323974-30324083) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fat (0.147427) | |
| ret (0.128733) |