Ss1.1-Ova1-OVRM10113B10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGCAGAAGTGAGGGGAGTAGCTGGGCCCTCTGCCACCGGCCTGGGCCCCACCATGCAGA CCCCGGCAGATTTCCCCTGGGGTGAGAGAGACTCACTCCCCTATCCCAGAAAGGATGAGG GCGTCCTCAAGGAGATCTCCATCACGCACCACGTCAAGGCAGGCTCCGAGAAGGCCGACC CATCCCATTTTGAGCTCCTCAAGGTTCTGGGCCAGGGATCCTTTGGCAAAGTCTTCCTGG TGCGGAAGATCACCCGGCCTGACAGTGGACACCTGTACGCCATGAAGGTACTAAAGAAGG CGACGCTGAAAGTGCGTGACCGTGTTCGGACTAAGATGGAGCGAGACATCCTTGCTGACG TAAACCACCCGTTTGTGGTGAAGCTGCACTACGCCTTCCAGACCGAGGGCAAGCTCTACC TTATTCTGGACTTCCTGCGTGGCGGGGACCTCTTCACACGGCTCTCCAAAGAGGTTATGT TCACGGAGGAGGATGTGAAGTTTTACCTGGCCGAGCTGGCTTTGGGCCTGGACCACCTGC ACAGCCTAGGCATCATTTACAGAGACCTGAAGCCTGAGAACATCCTTCTGGATGAGGAGG GCCACATCAAGCTCACTGACTTCGGCTTGAGCAAGGAGGCCATTGACCACGAGAAGAAGG CCTACTCCTTCTGCGGAACAGTGGAGTACATGGCCCCCGAGGTCGTCAACCGCCAGGGCC ACACCCACAGTGCAGACTGGTGGTCCTATGGGGTGCTGATGTTTGAGATGCTGACGGGCT CCCTGCCCTTCCAGGGGAAGGATCGGAAAGAGACCATGACACTGATTCTGAAGGCGAAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGCAGAAGTGAGGGGAGTAGCTGGGCCCTCTGCCACCGGCCTGGGCCCCACCATGCAGA CCCCGGCAGATTTCCCCTGGGGTGAGAGAGACTCACTCCCCTATCCCAGAAAGGATGAGG GCGTCCTCAAGGAGATCTCCATCACGCACCACGTCAAGGCAGGCTCCGAGAAGGCCGACC CATCCCATTTTGAGCTCCTCAAGGTTCTGGGCCAGGGATCCTTTGGCAAAGTCTTCCTGG TGCGGAAGATCACCCGGCCTGACAGTGGACACCTGTACGCCATGAAGGTACTAAAGAAGG CGACGCTGAAAGTGCGTGACCGTGTTCGGACTAAGATGGAGCGAGACATCCTTGCTGACG TAAACCACCCGTTTGTGGTGAAGCTGCACTACGCCTTCCAGACCGAGGGCAAGCTCTACC TTATTCTGGACTTCCTGCGTGGCGGGGACCTCTTCACACGGCTCTCCAAAGAGGTTATGT TCACGGAGGAGGATGTGAAGTTTTACCTGGCCGAGCTGGCTTTGGGCCTGGACCACCTGC ACAGCCTAGGCATCATTTACAGAGACCTGAAGCCTGAGAACATCCTTCTGGATGAGGAGG GCCACATCAAGCTCACTGACTTCGGCTTGAGCAAGGAGGCCATTGACCACGAGAAGAAGG CCTACTCCTTCTGCGGAACAGTGGAGTACATGGCCCCCGAGGTCGTCAACCGCCAGGGCC ACACCCACAGTGCAGACTGGTGGTCCTATGGGGTGCTGATGTTTGAGATGCTGACGGGCT CCCTGCCCTTCCAGGGGAAGGATCGGAAAGAGACCATGACACTGATTCTGAAGGCGAAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 112-232, gnl|bosTau2|chr2 (78434582-78434702) | |
| 112-232, gnl|canFam2|chr2 (76410393-76410257) | |
| 112-232, gnl|danRer3|chr17 (31437738-31437860) | |
| 112-232, gnl|dasNov1|scaffold_12931 (1079-1215) | |
| 112-232, gnl|echTel1|scaffold_316797 (67282-67146) | |
| 112-232, gnl|fr1|chrUn (55381664-55381806) | |
| 112-232, gnl|galGal2|chr23 (121587-121459) | |
| 112-232, gnl|hg17|chr1 (26557497-26557633) | |
| 112-232, gnl|Hg17|chr1 (26557498-26557618) | |
| 112-232, gnl|loxAfr1|scaffold_19913 (15937-15801) | |
| 112-232, gnl|mm7|chr4 (133250441-133250306) | |
| 112-232, gnl|Mm7|chr4 (133250438-133250318) | |
| 112-232, gnl|monDom2|scaffold_91 (4189098-4189227) | |
| 112-232, gnl|oryCun1|scaffold_182467 (40188-40324) | |
| 112-232, gnl|panTro1|chr1 (27246863-27246998) | |
| 112-232, gnl|rheMac2|chr1 (29188292-29188428) | |
| 112-232, gnl|rn3|chrX (56824634-56824494) | |
| 112-232, gnl|tetNig1|chr10 (6979491-6979633) | |
| 112-232, gnl|xenTro1|scaffold_1221 (107573-107708) | |
| 273-633, gnl|bosTau2|chr12 (19708908-19709271) | |
| 273-633, gnl|canFam2|chr25 (20146075-20145475) | |
| 273-633, gnl|danRer3|chr9 (14728751-14728157) | |
| 273-633, gnl|dasNov1|scaffold_39963 (6116-6720) | |
| 273-633, gnl|echTel1|scaffold_273846 (10436-11040) | |
| 273-633, gnl|fr1|chrUn (78363730-78363016) | |
| 273-633, gnl|galGal2|chr1 (170654388-170653785) | |
| 273-633, gnl|hg17|chr13 (20455361-20455966) | |
| 273-633, gnl|Hg17|chr13 (20455768-20455405) | |
| 273-633, gnl|loxAfr1|scaffold_17597 (21402-20801) | |
| 273-633, gnl|mm7|chr14 (52564835-52565435) | |
| 273-633, gnl|Mm7|chr14 (52565242-52564879) | |
| 273-633, gnl|monDom2|scaffold_15 (28796872-28797477) | |
| 273-633, gnl|oryCun1|scaffold_91461 (3823-4424) | |
| 273-633, gnl|panTro1|chr14 (19626736-19627340) | |
| 273-633, gnl|rheMac2|chr4 (113609293-113608699) | |
| 273-633, gnl|rn3|chr15 (36743199-36743799) | |
| 273-633, gnl|tetNig1|chr2 (17650761-17650089) | |
| 273-633, gnl|xenTro1|scaffold_952 (207078-206489) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 112-232, gnl|bosTau2|chr2 (78434582-78434702) | |
| 112-232, gnl|canFam2|chr2 (76410393-76410257) | |
| 112-232, gnl|danRer3|chr17 (31437738-31437860) | |
| 112-232, gnl|dasNov1|scaffold_12931 (1079-1215) | |
| 112-232, gnl|echTel1|scaffold_316797 (67282-67146) | |
| 112-232, gnl|fr1|chrUn (55381664-55381806) | |
| 112-232, gnl|galGal2|chr23 (121587-121459) | |
| 112-232, gnl|hg17|chr1 (26557497-26557633) | |
| 112-232, gnl|Hg17|chr1 (26557498-26557618) | |
| 112-232, gnl|loxAfr1|scaffold_19913 (15937-15801) | |
| 112-232, gnl|mm7|chr4 (133250441-133250306) | |
| 112-232, gnl|Mm7|chr4 (133250438-133250318) | |
| 112-232, gnl|monDom2|scaffold_91 (4189098-4189227) | |
| 112-232, gnl|oryCun1|scaffold_182467 (40188-40324) | |
| 112-232, gnl|panTro1|chr1 (27246863-27246998) | |
| 112-232, gnl|rheMac2|chr1 (29188292-29188428) | |
| 112-232, gnl|rn3|chrX (56824634-56824494) | |
| 112-232, gnl|tetNig1|chr10 (6979491-6979633) | |
| 112-232, gnl|xenTro1|scaffold_1221 (107573-107708) | |
| 273-633, gnl|bosTau2|chr12 (19708908-19709271) | |
| 273-633, gnl|canFam2|chr25 (20146075-20145475) | |
| 273-633, gnl|danRer3|chr9 (14728751-14728157) | |
| 273-633, gnl|dasNov1|scaffold_39963 (6116-6720) | |
| 273-633, gnl|echTel1|scaffold_273846 (10436-11040) | |
| 273-633, gnl|fr1|chrUn (78363730-78363016) | |
| 273-633, gnl|galGal2|chr1 (170654388-170653785) | |
| 273-633, gnl|hg17|chr13 (20455361-20455966) | |
| 273-633, gnl|Hg17|chr13 (20455768-20455405) | |
| 273-633, gnl|loxAfr1|scaffold_17597 (21402-20801) | |
| 273-633, gnl|mm7|chr14 (52564835-52565435) | |
| 273-633, gnl|Mm7|chr14 (52565242-52564879) | |
| 273-633, gnl|monDom2|scaffold_15 (28796872-28797477) | |
| 273-633, gnl|oryCun1|scaffold_91461 (3823-4424) | |
| 273-633, gnl|panTro1|chr14 (19626736-19627340) | |
| 273-633, gnl|rheMac2|chr4 (113609293-113608699) | |
| 273-633, gnl|rn3|chr15 (36743199-36743799) | |
| 273-633, gnl|tetNig1|chr2 (17650761-17650089) | |
| 273-633, gnl|xenTro1|scaffold_952 (207078-206489) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |