Ss1.1-Ova1-OVRM10120G06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAAGCCGCAGCCTCAGTCCCGCCGCGTCCGCCCAAGCGCCAGCTCCGCGTCCCGACCGGC CCGCGGCTGTCCGCTCCGCCGCCATGGCCACCTCCCCGCAGAAGTCGCCGTCTGTCCCCA AGTCCCCCACTCCCAAATCGCCCCCATCCCGGAAGAAAGACGACTCCTTCTTGGGGAAAC TCGGAGGGACTCTAGCCCGGAGAAAGAAAGCAAAGGAGGTGTCAGAGCTTCAGGAGGAGG GCATGAACGCCATCAACCTGCCCCTCAGCCCCATCCCCTTCGAGCTGGACCCTGAGGACA CGATGCTGGAGGAGAATGAAGTGCGAACCATGGTGGACCCCAACTCACGCAGCGACCCCA AACTCCAAGAACTGATGAAGGTATTAATTGACTGGATTAACGATGTTTTGGTTGGAGAAA GAATTATCGTGAAAGACCTGGCTGAAGATTTATACGACGGCCAAGTCCTGCAGAAGCTTT TTGAGAAACTTGAGAGTGAGAAGCTGAATGTTGCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAAGCCGCAGCCTCAGTCCCGCCGCGTCCGCCCAAGCGCCAGCTCCGCGTCCCGACCGGC CCGCGGCTGTCCGCTCCGCCGCCATGGCCACCTCCCCGCAGAAGTCGCCGTCTGTCCCCA AGTCCCCCACTCCCAAATCGCCCCCATCCCGGAAGAAAGACGACTCCTTCTTGGGGAAAC TCGGAGGGACTCTAGCCCGGAGAAAGAAAGCAAAGGAGGTGTCAGAGCTTCAGGAGGAGG GCATGAACGCCATCAACCTGCCCCTCAGCCCCATCCCCTTCGAGCTGGACCCTGAGGACA CGATGCTGGAGGAGAATGAAGTGCGAACCATGGTGGACCCCAACTCACGCAGCGACCCCA AACTCCAAGAACTGATGAAGGTATTAATTGACTGGATTAACGATGTTTTGGTTGGAGAAA GAATTATCGTGAAAGACCTGGCTGAAGATTTATACGACGGCCAAGTCCTGCAGAAGCTTT TTGAGAAACTTGAGAGTGAGAAGCTGAATGTTGCTG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 111-242, - strand, RNAz p=0.998114 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 111-242, - strand, RNAz p=0.998114 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 1-242, gnl|bosTau2|chr15 (23991732-23991980) | |
| 1-242, gnl|Hg17|chr11 (12355680-12355944) | |
| 1-242, gnl|Mm7|chr7 (108343918-108344133) | |
| 376-497, gnl|bosTau2|chr15 (24109057-24108937) | |
| 376-497, gnl|Hg17|chr11 (12455965-12456082) | |
| 376-497, gnl|Mm7|chr7 (108463527-108463652) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-242, gnl|bosTau2|chr15 (23991732-23991980) | |
| 1-242, gnl|Hg17|chr11 (12355680-12355944) | |
| 1-242, gnl|Mm7|chr7 (108343918-108344133) | |
| 376-497, gnl|bosTau2|chr15 (24109057-24108937) | |
| 376-497, gnl|Hg17|chr11 (12455965-12456082) | |
| 376-497, gnl|Mm7|chr7 (108463527-108463652) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nlu (0.191681) |