Ss1.1-Ova1-OVRM10121D02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCAGCGCCCGCGCCGGCGCCCCACGCCGTGCAGGGCCTCCACGCTCCCCCGGCGCCCCA GGAGGACCTAAGGTTCTGATGCTCGTGAGCCCTGTAGGGAGCGGGTCCTGGACAAAAACT CGGGCCGCAGCTTTTCGGCGTCGCCATGCAGGTCTCCAGCCTCAACGAGGTGAAGATTTA CAGCCTCAGCTGTGGCAAGTCCCTTCCCGAGTGGCTTTCTGACAGGAAGAAGAGAGCCCT ACAGAAGAAAGATGTTGATGTCCGTAGGAGGATCGAACTCATTCAAGATTTTGAAATGCC TACTGTTTGTACCACTATAAAGGTGTCAAAAGACGGACAGTATATTTTAGCAACTGGAAC GTATAAACCTCGCGTTCGATGTTATGACACCTATCAGTTATCCTTGAAGTTCGAAAGATG TTTAGATTCAGAGGTTGTCACCTTTGAAACTTTGTCTGATGACTATTCAAAGATTGTCTT CCTACATAACGATAGATACATTGAATTTCATTCCCAATCGGGTTTCTACTACAAAACCAG AATACCAAAGTTTGGGCGCGATTTCTCGTACCATTATCCATCCTGCGACCTGTACTTTGT CGGTGCAAGCTCTGAAGTTTACCGATTAAACTTGGAGCAGGGACGGTACCTGAATCCTCT GCAGACTGATGCTGCGGAGAATAATGTTTGTGACATAAATTCAGCGCACGGCTTGTTTGC CACGGGAACAATAGAGGGCCGAGTCGAGTGCTGGGACCCGAGGACGCGAGGCAGAGTTGG CCTGTTGGATTGTGCCTTAAGTAGCGTCACGGCTGATTCAGAGATAAACAGTTTACCAAC AATCTCTGCTCTGAAATTTAATGGTGCCTTGACCATGGCAGTTGGAACATCCACGGGGCA GGTTTTGTTGTATGATCTTCGATCTGATAAACCATTGCTAGTTAAGGATCACCAATATGG GCTGCCCATTAAATCAGTTCATTTCCAAGATTCATTAGATTTGATTTTGTCTGCCGACTC ACGGATTATCAAAATGTGGAATAAGAACTCAGGAAAAATATTTACTTCCTTGGAGCCAGA ACATGACATTAATGATGTCTGCCTCTATCCCAACTCAGGGATGCTTCTCACTGCCAACGA ATCTCCCAAGATGGGCATCTATTACATTCCGGTTCTGGGTCCTGCTCCCAGATGGTGCTC CTTCTTAGACAACTTGACGGAAGAATTAGAAGAGAATCCAGAAAGCACGGTTTATGATGA CTACAAATTTGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCAGCGCCCGCGCCGGCGCCCCACGCCGTGCAGGGCCTCCACGCTCCCCCGGCGCCCCA GGAGGACCTAAGGTTCTGATGCTCGTGAGCCCTGTAGGGAGCGGGTCCTGGACAAAAACT CGGGCCGCAGCTTTTCGGCGTCGCCATGCAGGTCTCCAGCCTCAACGAGGTGAAGATTTA CAGCCTCAGCTGTGGCAAGTCCCTTCCCGAGTGGCTTTCTGACAGGAAGAAGAGAGCCCT ACAGAAGAAAGATGTTGATGTCCGTAGGAGGATCGAACTCATTCAAGATTTTGAAATGCC TACTGTTTGTACCACTATAAAGGTGTCAAAAGACGGACAGTATATTTTAGCAACTGGAAC GTATAAACCTCGCGTTCGATGTTATGACACCTATCAGTTATCCTTGAAGTTCGAAAGATG TTTAGATTCAGAGGTTGTCACCTTTGAAACTTTGTCTGATGACTATTCAAAGATTGTCTT CCTACATAACGATAGATACATTGAATTTCATTCCCAATCGGGTTTCTACTACAAAACCAG AATACCAAAGTTTGGGCGCGATTTCTCGTACCATTATCCATCCTGCGACCTGTACTTTGT CGGTGCAAGCTCTGAAGTTTACCGATTAAACTTGGAGCAGGGACGGTACCTGAATCCTCT GCAGACTGATGCTGCGGAGAATAATGTTTGTGACATAAATTCAGCGCACGGCTTGTTTGC CACGGGAACAATAGAGGGCCGAGTCGAGTGCTGGGACCCGAGGACGCGAGGCAGAGTTGG CCTGTTGGATTGTGCCTTAAGTAGCGTCACGGCTGATTCAGAGATAAACAGTTTACCAAC AATCTCTGCTCTGAAATTTAATGGTGCCTTGACCATGGCAGTTGGAACATCCACGGGGCA GGTTTTGTTGTATGATCTTCGATCTGATAAACCATTGCTAGTTAAGGATCACCAATATGG GCTGCCCATTAAATCAGTTCATTTCCAAGATTCATTAGATTTGATTTTGTCTGCCGACTC ACGGATTATCAAAATGTGGAATAAGAACTCAGGAAAAATATTTACTTCCTTGGAGCCAGA ACATGACATTAATGATGTCTGCCTCTATCCCAACTCAGGGATGCTTCTCACTGCCAACGA ATCTCCCAAGATGGGCATCTATTACATTCCGGTTCTGGGTCCTGCTCCCAGATGGTGCTC CTTCTTAGACAACTTGACGGAAGAATTAGAAGAGAATCCAGAAAGCACGGTTTATGATGA CTACAAATTTGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 46 entry(ies) | More info |
| Aligned organism(s): 46 entry(ies) | Help | Less info |
| 60-211, gnl|bosTau2|chr11 (64585123-64584971) | |
| 60-211, gnl|Hg17|chr2 (10780671-10780520) | |
| 60-211, gnl|Mm7|chr12 (17398786-17398938) | |
| 257-364, gnl|bosTau2|chr11 (64578309-64578202) | |
| 257-364, gnl|Hg17|chr2 (10772794-10772687) | |
| 257-364, gnl|Mm7|chr12 (17402959-17403066) | |
| 471-609, gnl|bosTau2|chr11 (64573061-64572923) | |
| 471-609, gnl|canFam2|chr17 (10537251-10537422) | |
| 471-609, gnl|danRer3|chrUn (181761547-181761376) | |
| 471-609, gnl|dasNov1|scaffold_97334 (1665-1836) | |
| 471-609, gnl|echTel1|scaffold_301615 (3349-3520) | |
| 471-609, gnl|fr1|chrUn (211064892-211065037) | |
| 471-609, gnl|galGal2|chr3 (95154458-95154625) | |
| 471-609, gnl|hg17|chr2 (10762268-10762439) | |
| 471-609, gnl|Hg17|chr2 (10762416-10762278) | |
| 471-609, gnl|loxAfr1|scaffold_345 (27418-27247) | |
| 471-609, gnl|mm7|chr12 (17408567-17408389) | |
| 471-609, gnl|Mm7|chr12 (17408419-17408557) | |
| 471-609, gnl|monDom2|scaffold_1 (129550265-129550437) | |
| 471-609, gnl|oryCun1|scaffold_149312 (515-344) | |
| 471-609, gnl|panTro1|chr12 (11500408-11500579) | |
| 471-609, gnl|rheMac2|chr13 (10759541-10759714) | |
| 471-609, gnl|rn3|chr6 (41134761-41134591) | |
| 471-609, gnl|tetNig1|chr10 (755191-755352) | |
| 471-609, gnl|xenTro1|scaffold_636 (213321-213157) | |
| 900-1063, gnl|bosTau2|chr11 (64565402-64565239) | |
| 900-1063, gnl|Hg17|chr2 (10748617-10748454) | |
| 900-1063, gnl|Mm7|chr12 (17419783-17419946) | |
| 1171-1272, gnl|bosTau2|chr11 (64531612-64531511) | |
| 1171-1272, gnl|canFam2|chr17 (10489156-10489297) | |
| 1171-1272, gnl|danRer3|chrUn (181772032-181771901) | |
| 1171-1272, gnl|echTel1|scaffold_268696 (7622-7480) | |
| 1171-1272, gnl|fr1|chrUn (211060849-211060991) | |
| 1171-1272, gnl|galGal2|chr3 (95128253-95128395) | |
| 1171-1272, gnl|hg17|chr2 (10697905-10698047) | |
| 1171-1272, gnl|Hg17|chr2 (10698036-10697935) | |
| 1171-1272, gnl|loxAfr1|scaffold_61165 (32758-32616) | |
| 1171-1272, gnl|mm7|chr12 (17452524-17452382) | |
| 1171-1272, gnl|Mm7|chr12 (17452391-17452492) | |
| 1171-1272, gnl|monDom2|scaffold_1 (129473477-129473619) | |
| 1171-1272, gnl|oryCun1|scaffold_95609 (4079-4221) | |
| 1171-1272, gnl|panTro1|chr12 (11431922-11432064) | |
| 1171-1272, gnl|rheMac2|chr13 (10699524-10699666) | |
| 1171-1272, gnl|rn3|chr6 (41177882-41177740) | |
| 1171-1272, gnl|tetNig1|chr10 (751093-751225) | |
| 1171-1272, gnl|xenTro1|scaffold_636 (229546-229414) |
| Aligned organism(s): 46 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 60-211, gnl|bosTau2|chr11 (64585123-64584971) | |
| 60-211, gnl|Hg17|chr2 (10780671-10780520) | |
| 60-211, gnl|Mm7|chr12 (17398786-17398938) | |
| 257-364, gnl|bosTau2|chr11 (64578309-64578202) | |
| 257-364, gnl|Hg17|chr2 (10772794-10772687) | |
| 257-364, gnl|Mm7|chr12 (17402959-17403066) | |
| 471-609, gnl|bosTau2|chr11 (64573061-64572923) | |
| 471-609, gnl|canFam2|chr17 (10537251-10537422) | |
| 471-609, gnl|danRer3|chrUn (181761547-181761376) | |
| 471-609, gnl|dasNov1|scaffold_97334 (1665-1836) | |
| 471-609, gnl|echTel1|scaffold_301615 (3349-3520) | |
| 471-609, gnl|fr1|chrUn (211064892-211065037) | |
| 471-609, gnl|galGal2|chr3 (95154458-95154625) | |
| 471-609, gnl|hg17|chr2 (10762268-10762439) | |
| 471-609, gnl|Hg17|chr2 (10762416-10762278) | |
| 471-609, gnl|loxAfr1|scaffold_345 (27418-27247) | |
| 471-609, gnl|mm7|chr12 (17408567-17408389) | |
| 471-609, gnl|Mm7|chr12 (17408419-17408557) | |
| 471-609, gnl|monDom2|scaffold_1 (129550265-129550437) | |
| 471-609, gnl|oryCun1|scaffold_149312 (515-344) | |
| 471-609, gnl|panTro1|chr12 (11500408-11500579) | |
| 471-609, gnl|rheMac2|chr13 (10759541-10759714) | |
| 471-609, gnl|rn3|chr6 (41134761-41134591) | |
| 471-609, gnl|tetNig1|chr10 (755191-755352) | |
| 471-609, gnl|xenTro1|scaffold_636 (213321-213157) | |
| 900-1063, gnl|bosTau2|chr11 (64565402-64565239) | |
| 900-1063, gnl|Hg17|chr2 (10748617-10748454) | |
| 900-1063, gnl|Mm7|chr12 (17419783-17419946) | |
| 1171-1272, gnl|bosTau2|chr11 (64531612-64531511) | |
| 1171-1272, gnl|canFam2|chr17 (10489156-10489297) | |
| 1171-1272, gnl|danRer3|chrUn (181772032-181771901) | |
| 1171-1272, gnl|echTel1|scaffold_268696 (7622-7480) | |
| 1171-1272, gnl|fr1|chrUn (211060849-211060991) | |
| 1171-1272, gnl|galGal2|chr3 (95128253-95128395) | |
| 1171-1272, gnl|hg17|chr2 (10697905-10698047) | |
| 1171-1272, gnl|Hg17|chr2 (10698036-10697935) | |
| 1171-1272, gnl|loxAfr1|scaffold_61165 (32758-32616) | |
| 1171-1272, gnl|mm7|chr12 (17452524-17452382) | |
| 1171-1272, gnl|Mm7|chr12 (17452391-17452492) | |
| 1171-1272, gnl|monDom2|scaffold_1 (129473477-129473619) | |
| 1171-1272, gnl|oryCun1|scaffold_95609 (4079-4221) | |
| 1171-1272, gnl|panTro1|chr12 (11431922-11432064) | |
| 1171-1272, gnl|rheMac2|chr13 (10699524-10699666) | |
| 1171-1272, gnl|rn3|chr6 (41177882-41177740) | |
| 1171-1272, gnl|tetNig1|chr10 (751093-751225) | |
| 1171-1272, gnl|xenTro1|scaffold_636 (229546-229414) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) | |
| cly (0.120642) | |
| cty (0.10408) |