Ss1.1-Ova1-OVRM10124E05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGGGCGCGTCCTTAGTTTCAGTTCAGAGCAACTGGTGGCAACAGGTTAGCATTTAAGAT GGCAGGGACGGCGCGCCACGACCGGGAGATGTCAATCCAGGCCAAGAAGAAGCTCACCAC AGCCACCGACCCCATCGAGAGACTCCGCCTGCAGTGCCTGGCCAGGGGCTCTGCGGGCAT CAAAGGACTTGGCAGAGTGTTTCGAATTATGGATGACAATAACAACCGAACCCTTGATTT CAAAGAATTTGTGAAAGGGTTAAATGATTATGCTGTGGTCATGGAAAAGGAAGAGGCAGA AGAGCTTTTCCGGAGGTTTGATAAAGATGGAAGTGGAACAATAGACTTCAACGAATTTCT TCTCACATTAAGACCTCCAATGTCCAGAGCCAGAAAAGAGGTAATTATGCAAGCATTTAG AAAGTTAGACAAGACTGGAGATGGTGTGATAACAATCGAAGACCTTCGTGAGGTGTACAA TGCAAAACATCACCCAAAGTACCAAAATGGAGATTGGACAGAAGAGCAAGTATTCCGGAA ATTTCTGGATAACTTTGACTCACCCTATGACAAAGATGGAGTGGTGACCCCCGAGGAGTT TATGAACTACTATGCTGGGGTGAGCGCGTCCATCGACACCGATGTGTATTTCATCGTCAT GATGAGAACCGCCTGGAAGCTCTAAATGTGTGGCTCGGGGATCAGGACCTTGAGTGCTGC CACGTGGCTCCAAATGATTAAACATCAGCTCAAACCCAGGATCTTACTTGAGTTCATGTT CATCCCAGTGTTTCTTCCATGTCCACACACACTGCATCTTCTCTGGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGGGCGCGTCCTTAGTTTCAGTTCAGAGCAACTGGTGGCAACAGGTTAGCATTTAAGAT GGCAGGGACGGCGCGCCACGACCGGGAGATGTCAATCCAGGCCAAGAAGAAGCTCACCAC AGCCACCGACCCCATCGAGAGACTCCGCCTGCAGTGCCTGGCCAGGGGCTCTGCGGGCAT CAAAGGACTTGGCAGAGTGTTTCGAATTATGGATGACAATAACAACCGAACCCTTGATTT CAAAGAATTTGTGAAAGGGTTAAATGATTATGCTGTGGTCATGGAAAAGGAAGAGGCAGA AGAGCTTTTCCGGAGGTTTGATAAAGATGGAAGTGGAACAATAGACTTCAACGAATTTCT TCTCACATTAAGACCTCCAATGTCCAGAGCCAGAAAAGAGGTAATTATGCAAGCATTTAG AAAGTTAGACAAGACTGGAGATGGTGTGATAACAATCGAAGACCTTCGTGAGGTGTACAA TGCAAAACATCACCCAAAGTACCAAAATGGAGATTGGACAGAAGAGCAAGTATTCCGGAA ATTTCTGGATAACTTTGACTCACCCTATGACAAAGATGGAGTGGTGACCCCCGAGGAGTT TATGAACTACTATGCTGGGGTGAGCGCGTCCATCGACACCGATGTGTATTTCATCGTCAT GATGAGAACCGCCTGGAAGCTCTAAATGTGTGGCTCGGGGATCAGGACCTTGAGTGCTGC CACGTGGCTCCAAATGATTAAACATCAGCTCAAACCCAGGATCTTACTTGAGTTCATGTT CATCCCAGTGTTTCTTCCATGTCCACACACACTGCATCTTCTCTGGCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 193-373, gnl|bosTau2|chr20 (25936570-25936750) | |
| 193-373, gnl|canFam2|chr4 (75803863-75803674) | |
| 193-373, gnl|danRer3|chr21 (15118046-15117857) | |
| 193-373, gnl|echTel1|scaffold_224548 (2792-2603) | |
| 193-373, gnl|fr1|chrUn (138655732-138655921) | |
| 193-373, gnl|galGal2|chrUn (127009631-127009819) | |
| 193-373, gnl|hg17|chr5 (35946219-35946408) | |
| 193-373, gnl|Hg17|chr5 (35946405-35946225) | |
| 193-373, gnl|mm7|chr15 (9529439-9529250) | |
| 193-373, gnl|Mm7|chr15 (9529251-9529431) | |
| 193-373, gnl|monDom2|scaffold_20 (36502567-36502378) | |
| 193-373, gnl|oryCun1|scaffold_77855 (227-416) | |
| 193-373, gnl|panTro1|chr4 (80879822-80879633) | |
| 193-373, gnl|rheMac2|chr6 (35662906-35663095) | |
| 193-373, gnl|rn3|chr2 (58990533-58990344) | |
| 193-373, gnl|tetNig1|chr4 (5207057-5207245) | |
| 193-373, gnl|xenTro1|scaffold_1866 (62348-62537) | |
| 374-587, gnl|bosTau2|chr20 (25937035-25937248) | |
| 374-587, gnl|Hg17|chr5 (35945934-35945721) | |
| 374-587, gnl|Mm7|chr15 (9530188-9530401) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 193-373, gnl|bosTau2|chr20 (25936570-25936750) | |
| 193-373, gnl|canFam2|chr4 (75803863-75803674) | |
| 193-373, gnl|danRer3|chr21 (15118046-15117857) | |
| 193-373, gnl|echTel1|scaffold_224548 (2792-2603) | |
| 193-373, gnl|fr1|chrUn (138655732-138655921) | |
| 193-373, gnl|galGal2|chrUn (127009631-127009819) | |
| 193-373, gnl|hg17|chr5 (35946219-35946408) | |
| 193-373, gnl|Hg17|chr5 (35946405-35946225) | |
| 193-373, gnl|mm7|chr15 (9529439-9529250) | |
| 193-373, gnl|Mm7|chr15 (9529251-9529431) | |
| 193-373, gnl|monDom2|scaffold_20 (36502567-36502378) | |
| 193-373, gnl|oryCun1|scaffold_77855 (227-416) | |
| 193-373, gnl|panTro1|chr4 (80879822-80879633) | |
| 193-373, gnl|rheMac2|chr6 (35662906-35663095) | |
| 193-373, gnl|rn3|chr2 (58990533-58990344) | |
| 193-373, gnl|tetNig1|chr4 (5207057-5207245) | |
| 193-373, gnl|xenTro1|scaffold_1866 (62348-62537) | |
| 374-587, gnl|bosTau2|chr20 (25937035-25937248) | |
| 374-587, gnl|Hg17|chr5 (35945934-35945721) | |
| 374-587, gnl|Mm7|chr15 (9530188-9530401) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| ski (0.440205) | |
| sto (0.179824) | |
| ova (0.129132) | |
| ret (0.128733) | |
| tra (0.123092) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ski (0.440205) | |
| sto (0.179824) | |
| ova (0.129132) | |
| ret (0.128733) | |
| tra (0.123092) |