Ss1.1-Ova1-OVRM10124G03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGACACGAAGGTGGTTATATTTTTCATTTTTGGGTCAGTTCATTTGTTTGAGATCCAAAG TAGACCAAGTACGTATCAGGCATCCGTGAAGCCTCTGGTGCTCGCCTGTACCCCCGAGTA CTATGAAAGCCTGGTGTCGCCCATCGTTGGGCCTCTTTTCACCTACCTCCACATGAGGCT TTCCCAAAAATGGCAAGTCATCAACCAGAGGAGCATGCTGTGTGAAGATGAGACGACAGA TGAAAACCCAGAGTCTCAAGAGATGCTGGAGGAACAACTGGTGAGGATGTTAACCCGAGA AGTCGTGGACCTGATCACCGTGTGCTGTGTCTCAAAGAAGGGTGCTGACCACACTGCTAC TCCCGCTGCGGATGGAGAGGATGAAGAGATGATGGCCACAGAGGTAGCCACTCCAGCCAC GGCAGAGCTCACAGACCTGGGAAAGTGTCTGACGAAGCACGAGGATGTTTGCACAGCGCT GTTAATTCTAGCCTTCAACTCCCTCGCCTGGAAGGATACTCTGTCCTGCCAGAGGACCAC CACGCAGCTCTGCTGGCCCCTCCTCAAGCAAGTGCTATCGGGGACTCTGCTGGCAGAAGC TGTCACATGGCTCTTCACCAGCGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGACACGAAGGTGGTTATATTTTTCATTTTTGGGTCAGTTCATTTGTTTGAGATCCAAAG TAGACCAAGTACGTATCAGGCATCCGTGAAGCCTCTGGTGCTCGCCTGTACCCCCGAGTA CTATGAAAGCCTGGTGTCGCCCATCGTTGGGCCTCTTTTCACCTACCTCCACATGAGGCT TTCCCAAAAATGGCAAGTCATCAACCAGAGGAGCATGCTGTGTGAAGATGAGACGACAGA TGAAAACCCAGAGTCTCAAGAGATGCTGGAGGAACAACTGGTGAGGATGTTAACCCGAGA AGTCGTGGACCTGATCACCGTGTGCTGTGTCTCAAAGAAGGGTGCTGACCACACTGCTAC TCCCGCTGCGGATGGAGAGGATGAAGAGATGATGGCCACAGAGGTAGCCACTCCAGCCAC GGCAGAGCTCACAGACCTGGGAAAGTGTCTGACGAAGCACGAGGATGTTTGCACAGCGCT GTTAATTCTAGCCTTCAACTCCCTCGCCTGGAAGGATACTCTGTCCTGCCAGAGGACCAC CACGCAGCTCTGCTGGCCCCTCCTCAAGCAAGTGCTATCGGGGACTCTGCTGGCAGAAGC TGTCACATGGCTCTTCACCAGCGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 216-317, gnl|bosTau2|chr23 (17341647-17341545) | |
| 216-317, gnl|canFam2|chr12 (14991473-14991587) | |
| 216-317, gnl|danRer3|chr13 (44924777-44924675) | |
| 216-317, gnl|dasNov1|scaffold_4458 (46684-46798) | |
| 216-317, gnl|echTel1|scaffold_308664 (56626-56740) | |
| 216-317, gnl|fr1|chrUn (90626723-90626829) | |
| 216-317, gnl|galGal2|chr3 (27207302-27207191) | |
| 216-317, gnl|hg17|chr6 (43603345-43603459) | |
| 216-317, gnl|Hg17|chr6 (43603452-43603350) | |
| 216-317, gnl|loxAfr1|scaffold_7045 (5402-5516) | |
| 216-317, gnl|mm7|chr17 (44368398-44368279) | |
| 216-317, gnl|Mm7|chr17 (44368289-44368391) | |
| 216-317, gnl|monDom2|scaffold_0 (198014389-198014275) | |
| 216-317, gnl|oryCun1|scaffold_94417 (16058-16172) | |
| 216-317, gnl|panTro1|chr5 (44202823-44202937) | |
| 216-317, gnl|rheMac2|chr4 (43429211-43429325) | |
| 216-317, gnl|rn3|chr9 (10304365-10304479) | |
| 216-317, gnl|tetNig1|chr17 (5647319-5647207) | |
| 462-573, gnl|bosTau2|chr23 (17339489-17339378) | |
| 462-573, gnl|canFam2|chr12 (14989171-14989313) | |
| 462-573, gnl|danRer3|chrNA (20128134-20127990) | |
| 462-573, gnl|dasNov1|scaffold_4458 (44197-44340) | |
| 462-573, gnl|echTel1|scaffold_308664 (54918-55061) | |
| 462-573, gnl|fr1|chrUn (90625969-90626106) | |
| 462-573, gnl|galGal2|chr3 (27209373-27209242) | |
| 462-573, gnl|hg17|chr6 (43600807-43600950) | |
| 462-573, gnl|Hg17|chr6 (43600932-43600821) | |
| 462-573, gnl|loxAfr1|scaffold_7045 (3042-3185) | |
| 462-573, gnl|mm7|chr17 (44370333-44370201) | |
| 462-573, gnl|Mm7|chr17 (44370217-44370328) | |
| 462-573, gnl|monDom2|scaffold_0 (198017217-198017078) | |
| 462-573, gnl|oryCun1|scaffold_94417 (14072-14215) | |
| 462-573, gnl|panTro1|chr5 (44200269-44200412) | |
| 462-573, gnl|rheMac2|chr4 (43426647-43426790) | |
| 462-573, gnl|rn3|chr9 (10302748-10302891) | |
| 462-573, gnl|tetNig1|chr17 (5648032-5647903) | |
| 462-573, gnl|xenTro1|scaffold_1101 (10097-10235) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 216-317, gnl|bosTau2|chr23 (17341647-17341545) | |
| 216-317, gnl|canFam2|chr12 (14991473-14991587) | |
| 216-317, gnl|danRer3|chr13 (44924777-44924675) | |
| 216-317, gnl|dasNov1|scaffold_4458 (46684-46798) | |
| 216-317, gnl|echTel1|scaffold_308664 (56626-56740) | |
| 216-317, gnl|fr1|chrUn (90626723-90626829) | |
| 216-317, gnl|galGal2|chr3 (27207302-27207191) | |
| 216-317, gnl|hg17|chr6 (43603345-43603459) | |
| 216-317, gnl|Hg17|chr6 (43603452-43603350) | |
| 216-317, gnl|loxAfr1|scaffold_7045 (5402-5516) | |
| 216-317, gnl|mm7|chr17 (44368398-44368279) | |
| 216-317, gnl|Mm7|chr17 (44368289-44368391) | |
| 216-317, gnl|monDom2|scaffold_0 (198014389-198014275) | |
| 216-317, gnl|oryCun1|scaffold_94417 (16058-16172) | |
| 216-317, gnl|panTro1|chr5 (44202823-44202937) | |
| 216-317, gnl|rheMac2|chr4 (43429211-43429325) | |
| 216-317, gnl|rn3|chr9 (10304365-10304479) | |
| 216-317, gnl|tetNig1|chr17 (5647319-5647207) | |
| 462-573, gnl|bosTau2|chr23 (17339489-17339378) | |
| 462-573, gnl|canFam2|chr12 (14989171-14989313) | |
| 462-573, gnl|danRer3|chrNA (20128134-20127990) | |
| 462-573, gnl|dasNov1|scaffold_4458 (44197-44340) | |
| 462-573, gnl|echTel1|scaffold_308664 (54918-55061) | |
| 462-573, gnl|fr1|chrUn (90625969-90626106) | |
| 462-573, gnl|galGal2|chr3 (27209373-27209242) | |
| 462-573, gnl|hg17|chr6 (43600807-43600950) | |
| 462-573, gnl|Hg17|chr6 (43600932-43600821) | |
| 462-573, gnl|loxAfr1|scaffold_7045 (3042-3185) | |
| 462-573, gnl|mm7|chr17 (44370333-44370201) | |
| 462-573, gnl|Mm7|chr17 (44370217-44370328) | |
| 462-573, gnl|monDom2|scaffold_0 (198017217-198017078) | |
| 462-573, gnl|oryCun1|scaffold_94417 (14072-14215) | |
| 462-573, gnl|panTro1|chr5 (44200269-44200412) | |
| 462-573, gnl|rheMac2|chr4 (43426647-43426790) | |
| 462-573, gnl|rn3|chr9 (10302748-10302891) | |
| 462-573, gnl|tetNig1|chr17 (5648032-5647903) | |
| 462-573, gnl|xenTro1|scaffold_1101 (10097-10235) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| nco (0.161734) | |
| pla (0.133672) | |
| eep (0.122564) | |
| cty (0.10408) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nco (0.161734) | |
| pla (0.133672) | |
| eep (0.122564) | |
| cty (0.10408) |