Non-Coding RNA Search

Ss1.1-Ova1-OVRM10125E03.5

Sequence:


               
               ACTTCCGGTGCGCACCGGGCGGCCATGTTGGAACAGCGGAGGCGGCGCAGAGGTGCGTCT
TGGGTCCTTGCGGCGGCGCCGGTGCCAAGCCCTGGTTTGTGGATACCCAGGCAGATCTGC
AGTGCCTAATGCCATGAGCGTGGTGGTGCAGCATGTGGAGGAGAAAGCTGTGCACTCCTG
GTCGCGGATCTCCACGGCAGGGAAGAAGGCCCTGGAGGAGGCGCTGCTTGTCTTTAACCC
TATGAGCCAGGATCTCAGTGCCACTGAGGCCCAGCTTGTGGCCTTCCTGCAGGGCCTGCG
GGATGATGGCTTCCAACCTACCATCCTGCGGAGCGGTGATGTCTATGGCTATAGTTCATG
CACAGCCAACCCCCCAAGCCAGACAAAGCTGCAAGCTCGTGCCCCCATGCCAGCTGCCAC
ATCACCTCCAGCCAGTGCTCCCCGAACTCCCATGCAGCTTTCTGCAGGCCAGGCCACACT
GCTTCCCATGCCACTGTCTGGCAGGCTGGCCAAAGCGTCCACACCACCTCTCACCAAGCA
TGCCACCACCAACCTGCTACTGAACTCCCTGAAGCAGTCAAGTGCCAGCCATGCCCAGGG
TGCAGCAGTGGGCTTTCCCACCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTTCCGGTGCGCACCGGGCGGCCATGTTGGAACAGCGGAGGCGGCGCAGAGGTGCGTCT
TGGGTCCTTGCGGCGGCGCCGGTGCCAAGCCCTGGTTTGTGGATACCCAGGCAGATCTGC
AGTGCCTAATGCCATGAGCGTGGTGGTGCAGCATGTGGAGGAGAAAGCTGTGCACTCCTG
GTCGCGGATCTCCACGGCAGGGAAGAAGGCCCTGGAGGAGGCGCTGCTTGTCTTTAACCC
TATGAGCCAGGATCTCAGTGCCACTGAGGCCCAGCTTGTGGCCTTCCTGCAGGGCCTGCG
GGATGATGGCTTCCAACCTACCATCCTGCGGAGCGGTGATGTCTATGGCTATAGTTCATG
CACAGCCAACCCCCCAAGCCAGACAAAGCTGCAAGCTCGTGCCCCCATGCCAGCTGCCAC
ATCACCTCCAGCCAGTGCTCCCCGAACTCCCATGCAGCTTTCTGCAGGCCAGGCCACACT
GCTTCCCATGCCACTGTCTGGCAGGCTGGCCAAAGCGTCCACACCACCTCTCACCAAGCA
TGCCACCACCAACCTGCTACTGAACTCCCTGAAGCAGTCAAGTGCCAGCCATGCCCAGGG
TGCAGCAGTGGGCTTTCCCACCCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               324-624, gnl|bosTau2|chr22 (37688410-37688110)
               

               
               324-624, gnl|Hg17|chr3 (49176455-49176155)
               

               
               324-624, gnl|Mm7|chr9 (108196493-108196781)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               324-624, gnl|bosTau2|chr22 (37688410-37688110)
               

               
               324-624, gnl|Hg17|chr3 (49176455-49176155)
               

               
               324-624, gnl|Mm7|chr9 (108196493-108196781)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	324-624, gnl\|bosTau2\|chr22 (37688410-37688110)
	324-624, gnl\|Hg17\|chr3 (49176455-49176155)
	324-624, gnl\|Mm7\|chr9 (108196493-108196781)