Ss1.1-Ova1-OVRM10126E12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGTTATCAATGATGAGGTAAAGGTTGTGACAGGAAAGGATGGGCAGACTGGTACTCCTGT TGCTATAGCAACCCAGCTTCCTGCAAATGTTTCTGCTGCTTTTTCATCCCAGCAGCAACC ATTTCAGCAGCAAGCCCTTGCAGGGACCCTGGTGGCAGGGGCTGGAAGTACAGTAGAAAC GGACCCCTTTAAGAGGCAGCAGGCGGGACCCCCAGCAGAGCAGTCTAAGAGACCTCGACT TGAAGTGGGTCACCAAGGGGTAGTTTTCCAGCACCCAGGGGTGAATACAGGAGTTCCTCT TCAGCAGTTAATGCCGACAGTTCAAGGAGGAATGCCTCCCGCCCCTCAGGCTGCTCAGCT CGCGGGACAGAAGCAAAGCCAGCAACAGTATGACCCCTCCACGGGGCCTCCGGTGCAGAA TGCCGCCAGCTTGCACACGCCTCCGCCACAGCTCCCCGGCAGGCTGCCCGCAGCCGGCCT CCCCACCGTGCCCCTGCCGCCGGCGCTGCAGTTCTCCCAGCAGCCTCAGATGGTAGAGCC ACAGCCCCAGCTCCAGATCCCGGTGAAGACGCAGCAGCCGAATGCCCCCGTCCCCGCGCC CCCACCCAGCCAGCTCCCTGCTCCTCCTCCACAGCCCACGCCGCCGGCCCTCCACGTCCC AATGCCCGGGAAGGCACAGATGCAGGCCCCACCGCTCTCAGCTCAGCCGCAGACGGTGGC ATCATCGAGACCACCTGTGGACCCCGCCCAGCCCTGTCCTCGGCCCCCGCCGTCCTCTTC TACCTCATCCATTGCTCCTGCGAGTGGCTCAGGCCCGGGACCTTCACCGGCACGGGCCTC CCCAGTGAACAGACCCTCCTTGGCCACCACCAAGTCACTGTCTCCAGTCACCTCCCGCTC CCCTGGGGCGGCTGTGTCGGCACTGCCAAAACCACAGAGCCCGGCTCAGAATACTGCCCC ACCCCAGGACAGTTCTCAGGATAAGCTGGCAGAACAAATAGCACTGGAAAACCAGATCCA TCAACGAATAGCTGATTTAAGGAAGGAAGGCCTGTGGTCTCTCAGGCGGCTGCCGAAACT GCAGGAGGCCCCACGGCCCAAATCGCATTGGGACTACCTGCTGGAGGAGATGCAGTGGAT GGCCACGGACTTTGCCCAGGAGAGGAGGTGGAAGGTGGCCGCTGCCAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGTTATCAATGATGAGGTAAAGGTTGTGACAGGAAAGGATGGGCAGACTGGTACTCCTGT TGCTATAGCAACCCAGCTTCCTGCAAATGTTTCTGCTGCTTTTTCATCCCAGCAGCAACC ATTTCAGCAGCAAGCCCTTGCAGGGACCCTGGTGGCAGGGGCTGGAAGTACAGTAGAAAC GGACCCCTTTAAGAGGCAGCAGGCGGGACCCCCAGCAGAGCAGTCTAAGAGACCTCGACT TGAAGTGGGTCACCAAGGGGTAGTTTTCCAGCACCCAGGGGTGAATACAGGAGTTCCTCT TCAGCAGTTAATGCCGACAGTTCAAGGAGGAATGCCTCCCGCCCCTCAGGCTGCTCAGCT CGCGGGACAGAAGCAAAGCCAGCAACAGTATGACCCCTCCACGGGGCCTCCGGTGCAGAA TGCCGCCAGCTTGCACACGCCTCCGCCACAGCTCCCCGGCAGGCTGCCCGCAGCCGGCCT CCCCACCGTGCCCCTGCCGCCGGCGCTGCAGTTCTCCCAGCAGCCTCAGATGGTAGAGCC ACAGCCCCAGCTCCAGATCCCGGTGAAGACGCAGCAGCCGAATGCCCCCGTCCCCGCGCC CCCACCCAGCCAGCTCCCTGCTCCTCCTCCACAGCCCACGCCGCCGGCCCTCCACGTCCC AATGCCCGGGAAGGCACAGATGCAGGCCCCACCGCTCTCAGCTCAGCCGCAGACGGTGGC ATCATCGAGACCACCTGTGGACCCCGCCCAGCCCTGTCCTCGGCCCCCGCCGTCCTCTTC TACCTCATCCATTGCTCCTGCGAGTGGCTCAGGCCCGGGACCTTCACCGGCACGGGCCTC CCCAGTGAACAGACCCTCCTTGGCCACCACCAAGTCACTGTCTCCAGTCACCTCCCGCTC CCCTGGGGCGGCTGTGTCGGCACTGCCAAAACCACAGAGCCCGGCTCAGAATACTGCCCC ACCCCAGGACAGTTCTCAGGATAAGCTGGCAGAACAAATAGCACTGGAAAACCAGATCCA TCAACGAATAGCTGATTTAAGGAAGGAAGGCCTGTGGTCTCTCAGGCGGCTGCCGAAACT GCAGGAGGCCCCACGGCCCAAATCGCATTGGGACTACCTGCTGGAGGAGATGCAGTGGAT GGCCACGGACTTTGCCCAGGAGAGGAGGTGGAAGGTGGCCGCTGCCAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 57 entry(ies) | More info |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
| 15-127, gnl|bosTau2|chr17 (23711937-23711825) | |
| 15-127, gnl|canFam2|chr26 (3939227-3939103) | |
| 15-127, gnl|danRer3|chr8 (38277229-38277108) | |
| 15-127, gnl|dasNov1|scaffold_53400 (5689-5813) | |
| 15-127, gnl|echTel1|scaffold_283310 (46054-46178) | |
| 15-127, gnl|fr1|chrUn (247755598-247755480) | |
| 15-127, gnl|galGal2|chr15 (2588087-2587964) | |
| 15-127, gnl|hg17|chr12 (131114299-131114423) | |
| 15-127, gnl|Hg17|chr12 (131114305-131114417) | |
| 15-127, gnl|loxAfr1|scaffold_62507 (5175-5299) | |
| 15-127, gnl|mm7|chr5 (109920131-109920008) | |
| 15-127, gnl|Mm7|chr5 (109920124-109920012) | |
| 15-127, gnl|monDom2|scaffold_54 (4032572-4032448) | |
| 15-127, gnl|oryCun1|scaffold_168196 (12324-12200) | |
| 15-127, gnl|panTro1|chr10 (134156102-134156226) | |
| 15-127, gnl|rheMac2|chr11 (133271939-133272063) | |
| 15-127, gnl|rn3|chr12 (45915058-45915181) | |
| 15-127, gnl|tetNig1|chrUn_random (33514302-33514421) | |
| 15-127, gnl|xenTro1|scaffold_322 (1047666-1047791) | |
| 325-712, gnl|bosTau2|chr17 (23697573-23697186) | |
| 325-712, gnl|canFam2|chr26 (3924734-3924475) | |
| 325-712, gnl|danRer3|chr8 (38274517-38274268) | |
| 325-712, gnl|dasNov1|scaffold_76037 (5367-5626) | |
| 325-712, gnl|echTel1|scaffold_284528 (4726-4465) | |
| 325-712, gnl|fr1|chrUn (247753332-247753083) | |
| 325-712, gnl|galGal2|chr15 (2582914-2582654) | |
| 325-712, gnl|hg17|chr12 (131132851-131133110) | |
| 325-712, gnl|Hg17|chr12 (131132866-131133253) | |
| 325-712, gnl|loxAfr1|scaffold_8192 (59703-59442) | |
| 325-712, gnl|mm7|chr5 (109905907-109905649) | |
| 325-712, gnl|Mm7|chr5 (109905891-109905504) | |
| 325-712, gnl|monDom2|scaffold_54 (4017981-4017716) | |
| 325-712, gnl|oryCun1|scaffold_81919 (2715-2973) | |
| 325-712, gnl|panTro1|chr10 (134174627-134174886) | |
| 325-712, gnl|rheMac2|chr11 (133290694-133290953) | |
| 325-712, gnl|rn3|chr12 (45929611-45929868) | |
| 325-712, gnl|tetNig1|chrUn_random (33516607-33516856) | |
| 325-712, gnl|xenTro1|scaffold_322 (1056098-1056417) | |
| 1006-1188, gnl|bosTau2|chr17 (23694456-23694274) | |
| 1006-1188, gnl|canFam2|chr26 (3921324-3921122) | |
| 1006-1188, gnl|danRer3|chr8 (38271907-38271706) | |
| 1006-1188, gnl|dasNov1|scaffold_44814 (1670-1466) | |
| 1006-1188, gnl|echTel1|scaffold_284528 (719-522) | |
| 1006-1188, gnl|fr1|chrUn (247752416-247752227) | |
| 1006-1188, gnl|galGal2|chr15 (2581422-2581220) | |
| 1006-1188, gnl|hg17|chr12 (131138469-131138673) | |
| 1006-1188, gnl|Hg17|chr12 (131138479-131138661) | |
| 1006-1188, gnl|loxAfr1|scaffold_8192 (55952-55762) | |
| 1006-1188, gnl|mm7|chr5 (109900123-109899920) | |
| 1006-1188, gnl|Mm7|chr5 (109900113-109899931) | |
| 1006-1188, gnl|monDom2|scaffold_54 (4007493-4007296) | |
| 1006-1188, gnl|oryCun1|scaffold_81919 (9149-9352) | |
| 1006-1188, gnl|panTro1|chr10 (134180246-134180450) | |
| 1006-1188, gnl|rheMac2|chr11 (133296664-133296868) | |
| 1006-1188, gnl|rn3|chr12 (45934393-45934596) | |
| 1006-1188, gnl|tetNig1|chrUn_random (33517541-33517730) | |
| 1006-1188, gnl|xenTro1|scaffold_322 (963015-963214) |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 15-127, gnl|bosTau2|chr17 (23711937-23711825) | |
| 15-127, gnl|canFam2|chr26 (3939227-3939103) | |
| 15-127, gnl|danRer3|chr8 (38277229-38277108) | |
| 15-127, gnl|dasNov1|scaffold_53400 (5689-5813) | |
| 15-127, gnl|echTel1|scaffold_283310 (46054-46178) | |
| 15-127, gnl|fr1|chrUn (247755598-247755480) | |
| 15-127, gnl|galGal2|chr15 (2588087-2587964) | |
| 15-127, gnl|hg17|chr12 (131114299-131114423) | |
| 15-127, gnl|Hg17|chr12 (131114305-131114417) | |
| 15-127, gnl|loxAfr1|scaffold_62507 (5175-5299) | |
| 15-127, gnl|mm7|chr5 (109920131-109920008) | |
| 15-127, gnl|Mm7|chr5 (109920124-109920012) | |
| 15-127, gnl|monDom2|scaffold_54 (4032572-4032448) | |
| 15-127, gnl|oryCun1|scaffold_168196 (12324-12200) | |
| 15-127, gnl|panTro1|chr10 (134156102-134156226) | |
| 15-127, gnl|rheMac2|chr11 (133271939-133272063) | |
| 15-127, gnl|rn3|chr12 (45915058-45915181) | |
| 15-127, gnl|tetNig1|chrUn_random (33514302-33514421) | |
| 15-127, gnl|xenTro1|scaffold_322 (1047666-1047791) | |
| 325-712, gnl|bosTau2|chr17 (23697573-23697186) | |
| 325-712, gnl|canFam2|chr26 (3924734-3924475) | |
| 325-712, gnl|danRer3|chr8 (38274517-38274268) | |
| 325-712, gnl|dasNov1|scaffold_76037 (5367-5626) | |
| 325-712, gnl|echTel1|scaffold_284528 (4726-4465) | |
| 325-712, gnl|fr1|chrUn (247753332-247753083) | |
| 325-712, gnl|galGal2|chr15 (2582914-2582654) | |
| 325-712, gnl|hg17|chr12 (131132851-131133110) | |
| 325-712, gnl|Hg17|chr12 (131132866-131133253) | |
| 325-712, gnl|loxAfr1|scaffold_8192 (59703-59442) | |
| 325-712, gnl|mm7|chr5 (109905907-109905649) | |
| 325-712, gnl|Mm7|chr5 (109905891-109905504) | |
| 325-712, gnl|monDom2|scaffold_54 (4017981-4017716) | |
| 325-712, gnl|oryCun1|scaffold_81919 (2715-2973) | |
| 325-712, gnl|panTro1|chr10 (134174627-134174886) | |
| 325-712, gnl|rheMac2|chr11 (133290694-133290953) | |
| 325-712, gnl|rn3|chr12 (45929611-45929868) | |
| 325-712, gnl|tetNig1|chrUn_random (33516607-33516856) | |
| 325-712, gnl|xenTro1|scaffold_322 (1056098-1056417) | |
| 1006-1188, gnl|bosTau2|chr17 (23694456-23694274) | |
| 1006-1188, gnl|canFam2|chr26 (3921324-3921122) | |
| 1006-1188, gnl|danRer3|chr8 (38271907-38271706) | |
| 1006-1188, gnl|dasNov1|scaffold_44814 (1670-1466) | |
| 1006-1188, gnl|echTel1|scaffold_284528 (719-522) | |
| 1006-1188, gnl|fr1|chrUn (247752416-247752227) | |
| 1006-1188, gnl|galGal2|chr15 (2581422-2581220) | |
| 1006-1188, gnl|hg17|chr12 (131138469-131138673) | |
| 1006-1188, gnl|Hg17|chr12 (131138479-131138661) | |
| 1006-1188, gnl|loxAfr1|scaffold_8192 (55952-55762) | |
| 1006-1188, gnl|mm7|chr5 (109900123-109899920) | |
| 1006-1188, gnl|Mm7|chr5 (109900113-109899931) | |
| 1006-1188, gnl|monDom2|scaffold_54 (4007493-4007296) | |
| 1006-1188, gnl|oryCun1|scaffold_81919 (9149-9352) | |
| 1006-1188, gnl|panTro1|chr10 (134180246-134180450) | |
| 1006-1188, gnl|rheMac2|chr11 (133296664-133296868) | |
| 1006-1188, gnl|rn3|chr12 (45934393-45934596) | |
| 1006-1188, gnl|tetNig1|chrUn_random (33517541-33517730) | |
| 1006-1188, gnl|xenTro1|scaffold_322 (963015-963214) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| thg (0.126791) |