Ss1.1-Ova1-OVRM10128C05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAAGGAACAGAAGAAACTTCGAAGGCAAACAAGGAGGGAAGCACAGAAGGAACTACAAG AGAAAGTCAGGCTGGGCCTGATGCCTCCTCCAGAACCCAAAGTGAGAATTTCAAATTTGA TGCGAGTATTAGGAACAGAAGCTGTTCAAGACCCCACGAAGGTAGAAGCCCATGTCAGAG CTCAGATGGCAAAAAGACAGAAAGCGCATGAAGAGGCCAACGCTGCCCGAAAACTTACAG CAGAACAGAGAAAGGTCAAGAAAATTAAAAAGCTTAAAGAAGACATTTCACAGGGGGTAC ACATATCTGTATATAGGTAGGTGTCCAAACTGGGCCAGCCTTTCCCTTAGAGATATCAAA ATATTTTCCAAGTGCTTAAGACAGAATCACTGTGGTCTAAAGCATACCTAACATCAGCCT CAACTCTCTTGTAATGACCTAGTGTAAATCAAGAGCTAGTCAATCTTTTACAATGGCAAG GGTTAAAAAACCTACTCAGAAGAGTAGTTCGCTCTTGAATATTAGTGGTTCTCTCATGAA TTTAGTTCTCTGAGGTCTTAGTGAACTAGTACTGGTTCTGAAGAATGAGTGAATGAATAT GCTTGTTCAGGCTAAAATGTAAACTAAGTATCATTTATCTTCTATGAAGTATATTATTTC TCTAGGAAGCATTAAAAGTTTTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAAGGAACAGAAGAAACTTCGAAGGCAAACAAGGAGGGAAGCACAGAAGGAACTACAAG AGAAAGTCAGGCTGGGCCTGATGCCTCCTCCAGAACCCAAAGTGAGAATTTCAAATTTGA TGCGAGTATTAGGAACAGAAGCTGTTCAAGACCCCACGAAGGTAGAAGCCCATGTCAGAG CTCAGATGGCAAAAAGACAGAAAGCGCATGAAGAGGCCAACGCTGCCCGAAAACTTACAG CAGAACAGAGAAAGGTCAAGAAAATTAAAAAGCTTAAAGAAGACATTTCACAGGGGGTAC ACATATCTGTATATAGGTAGGTGTCCAAACTGGGCCAGCCTTTCCCTTAGAGATATCAAA ATATTTTCCAAGTGCTTAAGACAGAATCACTGTGGTCTAAAGCATACCTAACATCAGCCT CAACTCTCTTGTAATGACCTAGTGTAAATCAAGAGCTAGTCAATCTTTTACAATGGCAAG GGTTAAAAAACCTACTCAGAAGAGTAGTTCGCTCTTGAATATTAGTGGTTCTCTCATGAA TTTAGTTCTCTGAGGTCTTAGTGAACTAGTACTGGTTCTGAAGAATGAGTGAATGAATAT GCTTGTTCAGGCTAAAATGTAAACTAAGTATCATTTATCTTCTATGAAGTATATTATTTC TCTAGGAAGCATTAAAAGTTTTTT |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 101-202, gnl|bosTau2|chr3 (17133180-17133079) | |
| 101-202, gnl|canFam2|chr17 (62650342-62650270) | |
| 101-202, gnl|canFam2|chr17 (62650213-62650345) | |
| 101-202, gnl|dasNov1|scaffold_194503 (838-910) | |
| 101-202, gnl|dasNov1|scaffold_6888 (70277-70146) | |
| 101-202, gnl|echTel1|scaffold_293096 (59531-59459) | |
| 101-202, gnl|echTel1|scaffold_293096 (59402-59534) | |
| 101-202, gnl|fr1|chrUn (268074595-268074667) | |
| 101-202, gnl|fr1|chrUn (268074720-268074592) | |
| 101-202, gnl|hg17|chr1 (147129685-147129816) | |
| 101-202, gnl|Hg17|chr1 (147129709-147129810) | |
| 101-202, gnl|hg17|chr8 (68059488-68059560) | |
| 101-202, gnl|mm7|chr3 (95709593-95709665) | |
| 101-202, gnl|mm7|chr3 (95709721-95709585) | |
| 101-202, gnl|Mm7|chr3 (95709695-95709594) | |
| 101-202, gnl|monDom2|scaffold_44 (3552201-3552138) | |
| 101-202, gnl|monDom2|scaffold_44 (3552073-3552204) | |
| 101-202, gnl|panTro1|chr1 (128851538-128851669) | |
| 101-202, gnl|panTro1|chr7 (70081104-70081176) | |
| 101-202, gnl|rheMac2|chr1 (128718145-128718276) | |
| 101-202, gnl|rheMac2|chr8 (69609559-69609631) | |
| 101-202, gnl|rn3|chr2 (190586039-190586111) | |
| 101-202, gnl|rn3|chr2 (190586167-190586006) | |
| 101-202, gnl|tetNig1|chr8 (8767877-8767949) | |
| 101-202, gnl|tetNig1|chr8 (8768012-8767874) | |
| 101-202, gnl|xenTro1|scaffold_1304 (167516-167588) | |
| 101-202, gnl|xenTro1|scaffold_1304 (167637-167513) | |
| 203-497, gnl|bosTau2|chr3 (17132906-17132616) | |
| 203-497, gnl|Hg17|chr1 (147129983-147130278) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 101-202, gnl|bosTau2|chr3 (17133180-17133079) | |
| 101-202, gnl|canFam2|chr17 (62650342-62650270) | |
| 101-202, gnl|canFam2|chr17 (62650213-62650345) | |
| 101-202, gnl|dasNov1|scaffold_194503 (838-910) | |
| 101-202, gnl|dasNov1|scaffold_6888 (70277-70146) | |
| 101-202, gnl|echTel1|scaffold_293096 (59531-59459) | |
| 101-202, gnl|echTel1|scaffold_293096 (59402-59534) | |
| 101-202, gnl|fr1|chrUn (268074595-268074667) | |
| 101-202, gnl|fr1|chrUn (268074720-268074592) | |
| 101-202, gnl|hg17|chr1 (147129685-147129816) | |
| 101-202, gnl|Hg17|chr1 (147129709-147129810) | |
| 101-202, gnl|hg17|chr8 (68059488-68059560) | |
| 101-202, gnl|mm7|chr3 (95709593-95709665) | |
| 101-202, gnl|mm7|chr3 (95709721-95709585) | |
| 101-202, gnl|Mm7|chr3 (95709695-95709594) | |
| 101-202, gnl|monDom2|scaffold_44 (3552201-3552138) | |
| 101-202, gnl|monDom2|scaffold_44 (3552073-3552204) | |
| 101-202, gnl|panTro1|chr1 (128851538-128851669) | |
| 101-202, gnl|panTro1|chr7 (70081104-70081176) | |
| 101-202, gnl|rheMac2|chr1 (128718145-128718276) | |
| 101-202, gnl|rheMac2|chr8 (69609559-69609631) | |
| 101-202, gnl|rn3|chr2 (190586039-190586111) | |
| 101-202, gnl|rn3|chr2 (190586167-190586006) | |
| 101-202, gnl|tetNig1|chr8 (8767877-8767949) | |
| 101-202, gnl|tetNig1|chr8 (8768012-8767874) | |
| 101-202, gnl|xenTro1|scaffold_1304 (167516-167588) | |
| 101-202, gnl|xenTro1|scaffold_1304 (167637-167513) | |
| 203-497, gnl|bosTau2|chr3 (17132906-17132616) | |
| 203-497, gnl|Hg17|chr1 (147129983-147130278) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sme (0.305437) | |
| fhi (0.169578) | |
| med (0.116252) |