Ss1.1-Ova1-OVRM10147G08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AACAATGGGGAAGATAATGGCTGCCTGAGCAACGTCTGCGAGCAGGCGCTGGGTTAGAGG CGGGTCTCAACCAGCGACTCATCGGAGGCGGGCTTGAGAGCGGCGGCAGGGGAGGCGCCC AGGAGCCCCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTTGGCGGCGGCGGCCGAACCGAC CGAGTCGGATCCCGACACTAAAATCGAAGCAGAGAGTGAAGAAAACTAAAATCCAGTTTA TTGTATTACAATACTATGTCATAACAGTCAGATAATTTTCCACTTGTTCATCAAGATGGA AAGCTCAGATTCTAACGATAAAGGAAGTGGTGATCAGTCTGCAGCACAGCGCAGAAGTCA GATGGACCGATTGGATCGGGAAGAAGCTTTCTATCAATTTGTAAATAATCTCAGTGAAGA AGATTATAGGCTTATGAGGGATAACAATTTGCTAGGCACCCCAGGTGAAAGTACTGAGGA AGAGTTACTAAGAAGACTACAACAAATTAAAGAGGGCCCACCACCGCAAAACTCAGATGA AAATAGAGGTGGAGACTCTTCAGATGATGTGTCTAATGGTGACTCTATAATAGACTGGCT TAACTCAGTGAGACAAACTGGAAATACAACAAGAAGTGGGCAAAGAGGAAACCAATCTTG GAGAGCAGTGAGCCGGACTAATCCAAACAGTGGTGATTTCAGATTCAGTTTAGAGATCAA TGTTAATCGTAATAATGGGAGCCAAAATCCAGAGAATGAAAATGAACCATCTGCAAGACG TTCTACTGGAGAAAGTATGGACAACAACAGCCAAAGGCAAGTAGAAAATCCACGATCTGA GTCAGCATCTACAAGGCCACCCAGATCAGAACGAAATTCAACTGAAGCATTAACAGGAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AACAATGGGGAAGATAATGGCTGCCTGAGCAACGTCTGCGAGCAGGCGCTGGGTTAGAGG CGGGTCTCAACCAGCGACTCATCGGAGGCGGGCTTGAGAGCGGCGGCAGGGGAGGCGCCC AGGAGCCCCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTTGGCGGCGGCGGCCGAACCGAC CGAGTCGGATCCCGACACTAAAATCGAAGCAGAGAGTGAAGAAAACTAAAATCCAGTTTA TTGTATTACAATACTATGTCATAACAGTCAGATAATTTTCCACTTGTTCATCAAGATGGA AAGCTCAGATTCTAACGATAAAGGAAGTGGTGATCAGTCTGCAGCACAGCGCAGAAGTCA GATGGACCGATTGGATCGGGAAGAAGCTTTCTATCAATTTGTAAATAATCTCAGTGAAGA AGATTATAGGCTTATGAGGGATAACAATTTGCTAGGCACCCCAGGTGAAAGTACTGAGGA AGAGTTACTAAGAAGACTACAACAAATTAAAGAGGGCCCACCACCGCAAAACTCAGATGA AAATAGAGGTGGAGACTCTTCAGATGATGTGTCTAATGGTGACTCTATAATAGACTGGCT TAACTCAGTGAGACAAACTGGAAATACAACAAGAAGTGGGCAAAGAGGAAACCAATCTTG GAGAGCAGTGAGCCGGACTAATCCAAACAGTGGTGATTTCAGATTCAGTTTAGAGATCAA TGTTAATCGTAATAATGGGAGCCAAAATCCAGAGAATGAAAATGAACCATCTGCAAGACG TTCTACTGGAGAAAGTATGGACAACAACAGCCAAAGGCAAGTAGAAAATCCACGATCTGA GTCAGCATCTACAAGGCCACCCAGATCAGAACGAAATTCAACTGAAGCATTAACAGGAGA |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 1-207, gnl|bosTau2|chrX (21692852-21693043) | |
| 1-207, gnl|Hg17|chrX (73617454-73617278) | |
| 1-207, gnl|Mm7|chrX (99308615-99308432) | |
| 270-466, gnl|bosTau2|chrX (21707388-21707584) | |
| 270-466, gnl|canFam2|chrX (60942709-60942585) | |
| 270-466, gnl|canFam2|chrX (60942513-60942713) | |
| 270-466, gnl|danRer3|chr14 (9008008-9007896) | |
| 270-466, gnl|danRer3|chr14 (9007824-9008008) | |
| 270-466, gnl|dasNov1|scaffold_7858 (84427-84545) | |
| 270-466, gnl|dasNov1|scaffold_7858 (84616-84431) | |
| 270-466, gnl|echTel1|scaffold_188761 (2258-2134) | |
| 270-466, gnl|echTel1|scaffold_306596 (16243-16044) | |
| 270-466, gnl|fr1|chrUn (28808041-28807942) | |
| 270-466, gnl|fr1|chrUn (28807870-28808051) | |
| 270-466, gnl|galGal2|chr4 (12095524-12095404) | |
| 270-466, gnl|galGal2|chr4 (12095333-12095528) | |
| 270-466, gnl|hg17|chr15 (47873709-47873833) | |
| 270-466, gnl|hg17|chrX (73598663-73598862) | |
| 270-466, gnl|Hg17|chrX (73598858-73598663) | |
| 270-466, gnl|loxAfr1|scaffold_39318 (24616-24498) | |
| 270-466, gnl|loxAfr1|scaffold_39318 (24427-24619) | |
| 270-466, gnl|mm7|chrX (99294036-99293920) | |
| 270-466, gnl|mm7|chrX (99293848-99294045) | |
| 270-466, gnl|Mm7|chrX (99294041-99293848) | |
| 270-466, gnl|monDom2|scaffold_224 (473201-473326) | |
| 270-466, gnl|monDom2|scaffold_224 (473398-473197) | |
| 270-466, gnl|oryCun1|scaffold_186434 (11717-11598) | |
| 270-466, gnl|oryCun1|scaffold_186434 (11526-11726) | |
| 270-466, gnl|panTro1|chr16 (47885811-47885935) | |
| 270-466, gnl|panTro1|chrX (76136070-76136269) | |
| 270-466, gnl|rheMac2|chr7 (28113695-28113819) | |
| 270-466, gnl|rheMac2|chrX (73690486-73690686) | |
| 270-466, gnl|rn3|chrX (92046816-92046701) | |
| 270-466, gnl|rn3|chrX (92046629-92046825) | |
| 270-466, gnl|tetNig1|chr1 (1435856-1435955) | |
| 270-466, gnl|tetNig1|chr1 (1436027-1435856) | |
| 540-900, gnl|bosTau2|chrX (21709725-21710085) | |
| 540-900, gnl|Hg17|chrX (73595926-73595569) | |
| 540-900, gnl|Mm7|chrX (99291411-99291054) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-207, gnl|bosTau2|chrX (21692852-21693043) | |
| 1-207, gnl|Hg17|chrX (73617454-73617278) | |
| 1-207, gnl|Mm7|chrX (99308615-99308432) | |
| 270-466, gnl|bosTau2|chrX (21707388-21707584) | |
| 270-466, gnl|canFam2|chrX (60942709-60942585) | |
| 270-466, gnl|canFam2|chrX (60942513-60942713) | |
| 270-466, gnl|danRer3|chr14 (9008008-9007896) | |
| 270-466, gnl|danRer3|chr14 (9007824-9008008) | |
| 270-466, gnl|dasNov1|scaffold_7858 (84427-84545) | |
| 270-466, gnl|dasNov1|scaffold_7858 (84616-84431) | |
| 270-466, gnl|echTel1|scaffold_188761 (2258-2134) | |
| 270-466, gnl|echTel1|scaffold_306596 (16243-16044) | |
| 270-466, gnl|fr1|chrUn (28808041-28807942) | |
| 270-466, gnl|fr1|chrUn (28807870-28808051) | |
| 270-466, gnl|galGal2|chr4 (12095524-12095404) | |
| 270-466, gnl|galGal2|chr4 (12095333-12095528) | |
| 270-466, gnl|hg17|chr15 (47873709-47873833) | |
| 270-466, gnl|hg17|chrX (73598663-73598862) | |
| 270-466, gnl|Hg17|chrX (73598858-73598663) | |
| 270-466, gnl|loxAfr1|scaffold_39318 (24616-24498) | |
| 270-466, gnl|loxAfr1|scaffold_39318 (24427-24619) | |
| 270-466, gnl|mm7|chrX (99294036-99293920) | |
| 270-466, gnl|mm7|chrX (99293848-99294045) | |
| 270-466, gnl|Mm7|chrX (99294041-99293848) | |
| 270-466, gnl|monDom2|scaffold_224 (473201-473326) | |
| 270-466, gnl|monDom2|scaffold_224 (473398-473197) | |
| 270-466, gnl|oryCun1|scaffold_186434 (11717-11598) | |
| 270-466, gnl|oryCun1|scaffold_186434 (11526-11726) | |
| 270-466, gnl|panTro1|chr16 (47885811-47885935) | |
| 270-466, gnl|panTro1|chrX (76136070-76136269) | |
| 270-466, gnl|rheMac2|chr7 (28113695-28113819) | |
| 270-466, gnl|rheMac2|chrX (73690486-73690686) | |
| 270-466, gnl|rn3|chrX (92046816-92046701) | |
| 270-466, gnl|rn3|chrX (92046629-92046825) | |
| 270-466, gnl|tetNig1|chr1 (1435856-1435955) | |
| 270-466, gnl|tetNig1|chr1 (1436027-1435856) | |
| 540-900, gnl|bosTau2|chrX (21709725-21710085) | |
| 540-900, gnl|Hg17|chrX (73595926-73595569) | |
| 540-900, gnl|Mm7|chrX (99291411-99291054) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eru (0.120048) |