Ss1.1-Ova1-OVRM10149E02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCAGAGTGACTGGGAATCCAAAGCCGAAGATCTACTGGTTTAAAGATGGAAAGCAGGTC TCTCCCAGGAACGATCACTACATCATCCAGAGCGACCCCGATGGGACCTGCTCTCTGCAC CTGGCGGCCTCCACCTTGGATGACGACGGGAACTACACGATCATGGCCTCGAACCCTCAG GGCCGCAGCAGCTGCACGGGACGGCTGATGGTGCAGGCGGTGAACCAGAGGGGCCGCAGC CCCCGCTCGCCCGCAGGCCACCCTCACGGCAGAAGGCCTCGTTCCAGATCCAGGGACAGT GCGGATGAAAGTGAACCCATTCAAGAGCGATTCTTCAGACCTCACTTCCTGCAGGCGCCT GGGGACTTGACCGTCCAGGAGGGAAAACTCTGCCGGATGGACTGCAAGGTCAGTGGGCTG CCGACCCCAGATCTCAGCTGGCAGTTGGATGGAAAGCCCATCCGCCCGGACAGTGCCCAC AAGATGCTGGTGCGTGAGAACGGGGTGCACTCGCTGATCATTGAGCCCGTCTCGGCCCGG GACGCTGGCATCTACACCTGCGTGGCCACCAACCGGGCAGGACAGAACTCCTTCAGCCTG GAGCTTGTGGTTGCAGCTAAGGAGGCACACAAGCCCCCCGTGTTTCTGGAGAAGCTGCAG AACACGGGTGTGGCCGACGGGTACCCGGTGCGCCTGGAGTGCCGGGTGGCGGGGGCACCG CCACCACAGATCTTCTGGAAGAAAGAAAACGAATCGCTCACTCACAGCACCGACCGAGTG AGCATGCACCAGGACAGCCACGGCTACGTGTGTCTGCTCATCCAGGGAGCCAGCAAGGAC GACGCCGGCTGGTACACGGTGTCGGCCAAGAACGAGGCGGGGATCGTGTCCTGCACAGCC CGGCTGGACGTGTACACCCAGTGGCAGCAGCCACCGCCAAGTACGAAGCCGAAGCGGGTG CGGCCCTCGGCCAGCCGCTACGCCGCGCTCTCGGACCAGGGCCTGGACATCAGAGCCGCC TTCCAGCCCGAAGCCAGCCCATCCCACCTGACGCTGAGCCCGGGCCTGGTGGAGAGTGAG GACCTGTAACCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCAGAGTGACTGGGAATCCAAAGCCGAAGATCTACTGGTTTAAAGATGGAAAGCAGGTC TCTCCCAGGAACGATCACTACATCATCCAGAGCGACCCCGATGGGACCTGCTCTCTGCAC CTGGCGGCCTCCACCTTGGATGACGACGGGAACTACACGATCATGGCCTCGAACCCTCAG GGCCGCAGCAGCTGCACGGGACGGCTGATGGTGCAGGCGGTGAACCAGAGGGGCCGCAGC CCCCGCTCGCCCGCAGGCCACCCTCACGGCAGAAGGCCTCGTTCCAGATCCAGGGACAGT GCGGATGAAAGTGAACCCATTCAAGAGCGATTCTTCAGACCTCACTTCCTGCAGGCGCCT GGGGACTTGACCGTCCAGGAGGGAAAACTCTGCCGGATGGACTGCAAGGTCAGTGGGCTG CCGACCCCAGATCTCAGCTGGCAGTTGGATGGAAAGCCCATCCGCCCGGACAGTGCCCAC AAGATGCTGGTGCGTGAGAACGGGGTGCACTCGCTGATCATTGAGCCCGTCTCGGCCCGG GACGCTGGCATCTACACCTGCGTGGCCACCAACCGGGCAGGACAGAACTCCTTCAGCCTG GAGCTTGTGGTTGCAGCTAAGGAGGCACACAAGCCCCCCGTGTTTCTGGAGAAGCTGCAG AACACGGGTGTGGCCGACGGGTACCCGGTGCGCCTGGAGTGCCGGGTGGCGGGGGCACCG CCACCACAGATCTTCTGGAAGAAAGAAAACGAATCGCTCACTCACAGCACCGACCGAGTG AGCATGCACCAGGACAGCCACGGCTACGTGTGTCTGCTCATCCAGGGAGCCAGCAAGGAC GACGCCGGCTGGTACACGGTGTCGGCCAAGAACGAGGCGGGGATCGTGTCCTGCACAGCC CGGCTGGACGTGTACACCCAGTGGCAGCAGCCACCGCCAAGTACGAAGCCGAAGCGGGTG CGGCCCTCGGCCAGCCGCTACGCCGCGCTCTCGGACCAGGGCCTGGACATCAGAGCCGCC TTCCAGCCCGAAGCCAGCCCATCCCACCTGACGCTGAGCCCGGGCCTGGTGGAGAGTGAG GACCTGTAACCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 77 entry(ies) | More info |
| Aligned organism(s): 77 entry(ies) | Help | Less info |
| 25-132, gnl|bosTau2|chr8 (776827-776934) | |
| 25-132, gnl|canFam2|chr25 (22517185-22517322) | |
| 25-132, gnl|danRer3|chr18 (591759-591896) | |
| 25-132, gnl|dasNov1|scaffold_162486 (1090-978) | |
| 25-132, gnl|echTel1|scaffold_178506 (4611-4475) | |
| 25-132, gnl|fr1|chrUn (37684436-37684560) | |
| 25-132, gnl|galGal2|chr4 (25701934-25702071) | |
| 25-132, gnl|hg17|chr4 (170199620-170199757) | |
| 25-132, gnl|Hg17|chr4 (170199632-170199738) | |
| 25-132, gnl|loxAfr1|scaffold_84790 (4402-4266) | |
| 25-132, gnl|mm7|chr8 (59941305-59941168) | |
| 25-132, gnl|Mm7|chr8 (59941291-59941185) | |
| 25-132, gnl|monDom2|scaffold_9 (44961742-44961876) | |
| 25-132, gnl|oryCun1|scaffold_192317 (10460-10597) | |
| 25-132, gnl|panTro1|chr3 (187808976-187809113) | |
| 25-132, gnl|rheMac2|chr5 (161032655-161032792) | |
| 25-132, gnl|rn3|chr16 (31912513-31912650) | |
| 25-132, gnl|tetNig1|chr1_random (1772501-1772377) | |
| 25-132, gnl|xenTro1|scaffold_25 (2868098-2867962) | |
| 174-276, gnl|bosTau2|chr8 (780526-780628) | |
| 174-276, gnl|canFam2|chr25 (22525312-22525439) | |
| 174-276, gnl|dasNov1|scaffold_6489 (13385-13257) | |
| 174-276, gnl|echTel1|scaffold_324995 (81489-81363) | |
| 174-276, gnl|fr1|chrUn (37684778-37684860) | |
| 174-276, gnl|galGal2|chr4 (25705388-25705512) | |
| 174-276, gnl|hg17|chr4 (170209781-170209907) | |
| 174-276, gnl|Hg17|chr4 (170209801-170209903) | |
| 174-276, gnl|loxAfr1|scaffold_38791 (23355-23229) | |
| 174-276, gnl|mm7|chr8 (59934407-59934289) | |
| 174-276, gnl|Mm7|chr8 (59934389-59934291) | |
| 174-276, gnl|monDom2|scaffold_9 (44977865-44977991) | |
| 174-276, gnl|oryCun1|scaffold_208125 (374241-374365) | |
| 174-276, gnl|panTro1|chr3 (187819114-187819240) | |
| 174-276, gnl|rheMac2|chr5 (161042503-161042629) | |
| 174-276, gnl|rn3|chr16 (31920627-31920748) | |
| 174-276, gnl|xenTro1|scaffold_25 (2863227-2863109) | |
| 407-622, gnl|bosTau2|chr28 (17034505-17034290) | |
| 407-622, gnl|canFam2|chr4 (22664275-22664501) | |
| 407-622, gnl|danRer3|chr18 (597601-597826) | |
| 407-622, gnl|dasNov1|scaffold_6489 (7146-6922) | |
| 407-622, gnl|echTel1|scaffold_203267 (3987-3761) | |
| 407-622, gnl|fr1|chrUn (245163439-245163674) | |
| 407-622, gnl|galGal2|chr6 (9829990-9830214) | |
| 407-622, gnl|hg17|chr10 (69629128-69629354) | |
| 407-622, gnl|Hg17|chr10 (69629129-69629344) | |
| 407-622, gnl|loxAfr1|scaffold_5450 (88902-89128) | |
| 407-622, gnl|mm7|chr10 (62640901-62640676) | |
| 407-622, gnl|Mm7|chr10 (62640898-62640683) | |
| 407-622, gnl|monDom2|scaffold_67 (9259632-9259858) | |
| 407-622, gnl|oryCun1|scaffold_204533 (58166-58392) | |
| 407-622, gnl|panTro1|chr8 (70657709-70657935) | |
| 407-622, gnl|rheMac2|chr9 (69047936-69047710) | |
| 407-622, gnl|rn3|chr20 (25478028-25477803) | |
| 407-622, gnl|tetNig1|chr17 (958163-957943) | |
| 407-622, gnl|xenTro1|scaffold_228 (1086773-1086996) | |
| 781-915, gnl|bosTau2|chr28 (17029633-17029499) | |
| 781-915, gnl|canFam2|chr4 (22669234-22669415) | |
| 781-915, gnl|danRer3|chr18 (603049-603217) | |
| 781-915, gnl|dasNov1|scaffold_6489 (3663-3505) | |
| 781-915, gnl|echTel1|scaffold_169438 (4251-4075) | |
| 781-915, gnl|fr1|chrUn (245164041-245164197) | |
| 781-915, gnl|galGal2|chr6 (9833220-9833404) | |
| 781-915, gnl|hg17|chr10 (69636494-69636678) | |
| 781-915, gnl|Hg17|chr10 (69636531-69636665) | |
| 781-915, gnl|loxAfr1|scaffold_5450 (95445-95621) | |
| 781-915, gnl|mm7|chr10 (62637381-62637198) | |
| 781-915, gnl|Mm7|chr10 (62637343-62637209) | |
| 781-915, gnl|monDom2|scaffold_67 (9264736-9264915) | |
| 781-915, gnl|oryCun1|scaffold_196160 (45703-45887) | |
| 781-915, gnl|panTro1|chr8 (70665075-70665259) | |
| 781-915, gnl|rheMac2|chr9 (69040480-69040298) | |
| 781-915, gnl|rn3|chr20 (25473450-25473267) | |
| 781-915, gnl|tetNig1|chr17 (957542-957388) | |
| 781-915, gnl|xenTro1|scaffold_228 (1089870-1090046) | |
| 917-1087, gnl|bosTau2|chr8 (789895-790065) | |
| 917-1087, gnl|Hg17|chr4 (170222094-170222264) | |
| 917-1087, gnl|Mm7|chr8 (59922748-59922578) |
| Aligned organism(s): 77 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 25-132, gnl|bosTau2|chr8 (776827-776934) | |
| 25-132, gnl|canFam2|chr25 (22517185-22517322) | |
| 25-132, gnl|danRer3|chr18 (591759-591896) | |
| 25-132, gnl|dasNov1|scaffold_162486 (1090-978) | |
| 25-132, gnl|echTel1|scaffold_178506 (4611-4475) | |
| 25-132, gnl|fr1|chrUn (37684436-37684560) | |
| 25-132, gnl|galGal2|chr4 (25701934-25702071) | |
| 25-132, gnl|hg17|chr4 (170199620-170199757) | |
| 25-132, gnl|Hg17|chr4 (170199632-170199738) | |
| 25-132, gnl|loxAfr1|scaffold_84790 (4402-4266) | |
| 25-132, gnl|mm7|chr8 (59941305-59941168) | |
| 25-132, gnl|Mm7|chr8 (59941291-59941185) | |
| 25-132, gnl|monDom2|scaffold_9 (44961742-44961876) | |
| 25-132, gnl|oryCun1|scaffold_192317 (10460-10597) | |
| 25-132, gnl|panTro1|chr3 (187808976-187809113) | |
| 25-132, gnl|rheMac2|chr5 (161032655-161032792) | |
| 25-132, gnl|rn3|chr16 (31912513-31912650) | |
| 25-132, gnl|tetNig1|chr1_random (1772501-1772377) | |
| 25-132, gnl|xenTro1|scaffold_25 (2868098-2867962) | |
| 174-276, gnl|bosTau2|chr8 (780526-780628) | |
| 174-276, gnl|canFam2|chr25 (22525312-22525439) | |
| 174-276, gnl|dasNov1|scaffold_6489 (13385-13257) | |
| 174-276, gnl|echTel1|scaffold_324995 (81489-81363) | |
| 174-276, gnl|fr1|chrUn (37684778-37684860) | |
| 174-276, gnl|galGal2|chr4 (25705388-25705512) | |
| 174-276, gnl|hg17|chr4 (170209781-170209907) | |
| 174-276, gnl|Hg17|chr4 (170209801-170209903) | |
| 174-276, gnl|loxAfr1|scaffold_38791 (23355-23229) | |
| 174-276, gnl|mm7|chr8 (59934407-59934289) | |
| 174-276, gnl|Mm7|chr8 (59934389-59934291) | |
| 174-276, gnl|monDom2|scaffold_9 (44977865-44977991) | |
| 174-276, gnl|oryCun1|scaffold_208125 (374241-374365) | |
| 174-276, gnl|panTro1|chr3 (187819114-187819240) | |
| 174-276, gnl|rheMac2|chr5 (161042503-161042629) | |
| 174-276, gnl|rn3|chr16 (31920627-31920748) | |
| 174-276, gnl|xenTro1|scaffold_25 (2863227-2863109) | |
| 407-622, gnl|bosTau2|chr28 (17034505-17034290) | |
| 407-622, gnl|canFam2|chr4 (22664275-22664501) | |
| 407-622, gnl|danRer3|chr18 (597601-597826) | |
| 407-622, gnl|dasNov1|scaffold_6489 (7146-6922) | |
| 407-622, gnl|echTel1|scaffold_203267 (3987-3761) | |
| 407-622, gnl|fr1|chrUn (245163439-245163674) | |
| 407-622, gnl|galGal2|chr6 (9829990-9830214) | |
| 407-622, gnl|hg17|chr10 (69629128-69629354) | |
| 407-622, gnl|Hg17|chr10 (69629129-69629344) | |
| 407-622, gnl|loxAfr1|scaffold_5450 (88902-89128) | |
| 407-622, gnl|mm7|chr10 (62640901-62640676) | |
| 407-622, gnl|Mm7|chr10 (62640898-62640683) | |
| 407-622, gnl|monDom2|scaffold_67 (9259632-9259858) | |
| 407-622, gnl|oryCun1|scaffold_204533 (58166-58392) | |
| 407-622, gnl|panTro1|chr8 (70657709-70657935) | |
| 407-622, gnl|rheMac2|chr9 (69047936-69047710) | |
| 407-622, gnl|rn3|chr20 (25478028-25477803) | |
| 407-622, gnl|tetNig1|chr17 (958163-957943) | |
| 407-622, gnl|xenTro1|scaffold_228 (1086773-1086996) | |
| 781-915, gnl|bosTau2|chr28 (17029633-17029499) | |
| 781-915, gnl|canFam2|chr4 (22669234-22669415) | |
| 781-915, gnl|danRer3|chr18 (603049-603217) | |
| 781-915, gnl|dasNov1|scaffold_6489 (3663-3505) | |
| 781-915, gnl|echTel1|scaffold_169438 (4251-4075) | |
| 781-915, gnl|fr1|chrUn (245164041-245164197) | |
| 781-915, gnl|galGal2|chr6 (9833220-9833404) | |
| 781-915, gnl|hg17|chr10 (69636494-69636678) | |
| 781-915, gnl|Hg17|chr10 (69636531-69636665) | |
| 781-915, gnl|loxAfr1|scaffold_5450 (95445-95621) | |
| 781-915, gnl|mm7|chr10 (62637381-62637198) | |
| 781-915, gnl|Mm7|chr10 (62637343-62637209) | |
| 781-915, gnl|monDom2|scaffold_67 (9264736-9264915) | |
| 781-915, gnl|oryCun1|scaffold_196160 (45703-45887) | |
| 781-915, gnl|panTro1|chr8 (70665075-70665259) | |
| 781-915, gnl|rheMac2|chr9 (69040480-69040298) | |
| 781-915, gnl|rn3|chr20 (25473450-25473267) | |
| 781-915, gnl|tetNig1|chr17 (957542-957388) | |
| 781-915, gnl|xenTro1|scaffold_228 (1089870-1090046) | |
| 917-1087, gnl|bosTau2|chr8 (789895-790065) | |
| 917-1087, gnl|Hg17|chr4 (170222094-170222264) | |
| 917-1087, gnl|Mm7|chr8 (59922748-59922578) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) |