Ss1.1-Ova1-OVRM10149F09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGGGAACGTGAAAAAATAATAGAGTCTGGGGATTTCGGGGCCGAAGTCTTCCCCAGAGC AGCTGCCTTGATGTTTACTTTGACAAGTAGTGACTGAAAAGTTCCACCAGGTGAGAAGAG TGATGACCATCCTTTTCCTTACTATGGTTATTTCATACTTCGGTTGCATGAAGGCTGCCC CCATGAAAGAAGCCAACGTCCGAGGACAAGGCAGCTTGGCCTACCCAGGTGTGCGGACCC ATGGGACTCTGGAGAGCGTGAATGGGCCCAAGGCAGGTTCAAGAGGCCTGACATCGTCCT CATCGTCGTCGTTGGCGGACACTTTTGAACACGTGATCGAGGAGCTGTTGGACGAGGACC AGAAAGTTCGGCCCAATGAGGAAAACAATAAGGACGCGGACATGTATACGTCCCGAGTCA TGCTCAGCAGTCAAGTGCCTTTGGAGCCTCCTCTTCTCTTTCTGCTGGAGGAATACAAAA ATTACCTGGATGCTGCAAACATGTCCATGAGGGTCCGGCGCCACTCGGACCCCGCCCGCC GCGGGGAGCTGAGCGTGTGCGACAGCATTAGCGAGTGGGTGACGGCGGCGGATAAAAAGA CGGCAGTGGACATGTCGGGTGGCACGGTCACGGTCCTCAGAAAAAGTCCCCGTCTCGAAA GGCCAACTGAAGCAGTACTTCTACGAGACCAAGTGCAATCCTATGGGGTACACAAAGGAG GGCTGCAGGGGCATAGACAAGAGGCACTGGAACTCCCAGTGCCGAACTACCCAGTCGTAT GTGCGGGCCCTCACCATGGATAGCAAAAAGCGAATTGGCTGGCGGTTCATAAGGATAGAC ACTTCCTGTGTATGTACTTTGACCATTAAGAGGGGAAGATAGTGGCTTTATGTTGTATAG ATTATATTGAGACAAAAATTATCTATTTGTATATATACATAACAGGGTAAATTATTCAGT TAAGAAAAAAAATAATTTTATGAACTGCATGTATAAATGAAGTTTATACAGTACAGTGGT TCTACAATCTATTTATTGGACATTTCCATGACCAGAGGGAAACAGTCATTTTTTGCGCAC AACTTTAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGGGAACGTGAAAAAATAATAGAGTCTGGGGATTTCGGGGCCGAAGTCTTCCCCAGAGC AGCTGCCTTGATGTTTACTTTGACAAGTAGTGACTGAAAAGTTCCACCAGGTGAGAAGAG TGATGACCATCCTTTTCCTTACTATGGTTATTTCATACTTCGGTTGCATGAAGGCTGCCC CCATGAAAGAAGCCAACGTCCGAGGACAAGGCAGCTTGGCCTACCCAGGTGTGCGGACCC ATGGGACTCTGGAGAGCGTGAATGGGCCCAAGGCAGGTTCAAGAGGCCTGACATCGTCCT CATCGTCGTCGTTGGCGGACACTTTTGAACACGTGATCGAGGAGCTGTTGGACGAGGACC AGAAAGTTCGGCCCAATGAGGAAAACAATAAGGACGCGGACATGTATACGTCCCGAGTCA TGCTCAGCAGTCAAGTGCCTTTGGAGCCTCCTCTTCTCTTTCTGCTGGAGGAATACAAAA ATTACCTGGATGCTGCAAACATGTCCATGAGGGTCCGGCGCCACTCGGACCCCGCCCGCC GCGGGGAGCTGAGCGTGTGCGACAGCATTAGCGAGTGGGTGACGGCGGCGGATAAAAAGA CGGCAGTGGACATGTCGGGTGGCACGGTCACGGTCCTCAGAAAAAGTCCCCGTCTCGAAA GGCCAACTGAAGCAGTACTTCTACGAGACCAAGTGCAATCCTATGGGGTACACAAAGGAG GGCTGCAGGGGCATAGACAAGAGGCACTGGAACTCCCAGTGCCGAACTACCCAGTCGTAT GTGCGGGCCCTCACCATGGATAGCAAAAAGCGAATTGGCTGGCGGTTCATAAGGATAGAC ACTTCCTGTGTATGTACTTTGACCATTAAGAGGGGAAGATAGTGGCTTTATGTTGTATAG ATTATATTGAGACAAAAATTATCTATTTGTATATATACATAACAGGGTAAATTATTCAGT TAAGAAAAAAAATAATTTTATGAACTGCATGTATAAATGAAGTTTATACAGTACAGTGGT TCTACAATCTATTTATTGGACATTTCCATGACCAGAGGGAAACAGTCATTTTTTGCGCAC AACTTTAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 1-101, gnl|bosTau2|chr15 (37173529-37173428) | |
| 1-101, gnl|Hg17|chr11 (27679520-27679420) | |
| 1-101, gnl|Mm7|chr2 (109543460-109543561) | |
| 442-888, gnl|bosTau2|chr5 (62128526-62128968) | |
| 442-888, gnl|Hg17|chr12 (5473976-5474418) | |
| 442-888, gnl|Mm7|chr6 (126124963-126124518) | |
| 539-882, gnl|bosTau2|chr3 (22448302-22448636) | |
| 539-882, gnl|canFam2|chr17 (55975603-55975865) | |
| 539-882, gnl|danRer3|chr6 (21985777-21985518) | |
| 539-882, gnl|dasNov1|scaffold_108561 (3778-3516) | |
| 539-882, gnl|fr1|chrUn (27145489-27145177) | |
| 539-882, gnl|galGal2|chr26 (2589160-2589418) | |
| 539-882, gnl|hg17|chr1 (115540733-115540995) | |
| 539-882, gnl|Hg17|chr1 (115541072-115540738) | |
| 539-882, gnl|loxAfr1|scaffold_819 (73067-73329) | |
| 539-882, gnl|mm7|chr3 (102314742-102314480) | |
| 539-882, gnl|Mm7|chr3 (102314401-102314735) | |
| 539-882, gnl|monDom2|scaffold_82 (700620-700879) | |
| 539-882, gnl|oryCun1|scaffold_211836 (136704-136458) | |
| 539-882, gnl|rheMac2|chr1 (118269737-118269999) | |
| 539-882, gnl|rn3|chr2 (197595549-197595287) | |
| 539-882, gnl|tetNig1|chr11 (7752343-7752586) | |
| 539-882, gnl|xenTro1|scaffold_393 (854401-854146) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-101, gnl|bosTau2|chr15 (37173529-37173428) | |
| 1-101, gnl|Hg17|chr11 (27679520-27679420) | |
| 1-101, gnl|Mm7|chr2 (109543460-109543561) | |
| 442-888, gnl|bosTau2|chr5 (62128526-62128968) | |
| 442-888, gnl|Hg17|chr12 (5473976-5474418) | |
| 442-888, gnl|Mm7|chr6 (126124963-126124518) | |
| 539-882, gnl|bosTau2|chr3 (22448302-22448636) | |
| 539-882, gnl|canFam2|chr17 (55975603-55975865) | |
| 539-882, gnl|danRer3|chr6 (21985777-21985518) | |
| 539-882, gnl|dasNov1|scaffold_108561 (3778-3516) | |
| 539-882, gnl|fr1|chrUn (27145489-27145177) | |
| 539-882, gnl|galGal2|chr26 (2589160-2589418) | |
| 539-882, gnl|hg17|chr1 (115540733-115540995) | |
| 539-882, gnl|Hg17|chr1 (115541072-115540738) | |
| 539-882, gnl|loxAfr1|scaffold_819 (73067-73329) | |
| 539-882, gnl|mm7|chr3 (102314742-102314480) | |
| 539-882, gnl|Mm7|chr3 (102314401-102314735) | |
| 539-882, gnl|monDom2|scaffold_82 (700620-700879) | |
| 539-882, gnl|oryCun1|scaffold_211836 (136704-136458) | |
| 539-882, gnl|rheMac2|chr1 (118269737-118269999) | |
| 539-882, gnl|rn3|chr2 (197595549-197595287) | |
| 539-882, gnl|tetNig1|chr11 (7752343-7752586) | |
| 539-882, gnl|xenTro1|scaffold_393 (854401-854146) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbe (0.239234) | |
| gul (0.177588) | |
| eye (0.170503) |