Ss1.1-Ova1-OVRM10149G06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGACCAATAAGATGCTTTGAGAAGAAAAAGAGAGGCTGGAACAAGATCTGCAGCAGATG CAAGCCAAGGTGAGGAAACTGGAGTTAGATATTTTACCCTTACAAGAAGCAAATGCTGAG TTGAGTGAGAAAAGTGGTATGTTGCAAGCAGAGAAGAAGTTACTAGAAGAAGATGTCAAA CGTTGGAAAGCACGTAACCAGCATCTGATAAGTCAACAGAAAGACCCAGATACAGAAGAA TATCGGAAGCTTCTTTCTGAAAAGGAAGTTCATACTAAGCGTATTCAGCAATTGACTGAA GAAATTGGAAGACTTAAAGCTGAAATTGCAAGATCAAATGCGTCTTTGACTAACAACCAG AATTTAATTCAGAGTCTAAAGGAAGATTTAAATAAAGTAAGAACTGAAAAGGAAAGCATC CAGAAAGACTTAGATGCCAAAATAATTGATATTCAAGAAAAGTTAAAACTATTACTCAAG TCAAGAAAATTGGACGTAGGTATAAGACTCAATATGAAGAACTTAAAGCACAACAAGATA AGGTCATGGAGACCTCAGCTCAGTCTTCTGGAGACCATCAGGAACAGCATGTCTCAGTCC AGGAAATGCAGGAGCTTAAAGAAGCCCTTAACCAAGCTGAAGCAAAGTCAAAATCGCTTG AGAGTCAAGTAGAGAATCTGCAGAAGACATTATCTGAAAAAGAGATGGAAGCAAGAAATC TCCAGGAACAGACTGTGCAGCTTCAATCTGAACTTTCACGACTTCGCCAGGACCTTCAAG ATAGAACCACGCAGGAGGAGCAGCTCAGGCAGCAGATAACTGAAAAGGAAGAAAAAACAA GAAAGGCTATTGTAGCAGCAAAATCAAAAATTGCTCATTTAGCTGGTGTAAAAGATCAGC TAACCAAAGAAAATGAGGAGCTGAAACAAAGGAATGGAGCCTTAGATCAGCAGAAAGATG AGCTGGATGTTCGTATGACTGCTCTTAAGTCCCAGTATGAAGGTCGAATTAGTCGTTTGG AAAGAGAACTCAGGGAGCATCAAGAGAGACACCTTGAGCAGAGAGATGAGCCTCAAGAAC CTACTAATAAGGTCCCAGAACAGCAGAGACAGATCACATTGAAAACAACTCCAGCTTCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGACCAATAAGATGCTTTGAGAAGAAAAAGAGAGGCTGGAACAAGATCTGCAGCAGATG CAAGCCAAGGTGAGGAAACTGGAGTTAGATATTTTACCCTTACAAGAAGCAAATGCTGAG TTGAGTGAGAAAAGTGGTATGTTGCAAGCAGAGAAGAAGTTACTAGAAGAAGATGTCAAA CGTTGGAAAGCACGTAACCAGCATCTGATAAGTCAACAGAAAGACCCAGATACAGAAGAA TATCGGAAGCTTCTTTCTGAAAAGGAAGTTCATACTAAGCGTATTCAGCAATTGACTGAA GAAATTGGAAGACTTAAAGCTGAAATTGCAAGATCAAATGCGTCTTTGACTAACAACCAG AATTTAATTCAGAGTCTAAAGGAAGATTTAAATAAAGTAAGAACTGAAAAGGAAAGCATC CAGAAAGACTTAGATGCCAAAATAATTGATATTCAAGAAAAGTTAAAACTATTACTCAAG TCAAGAAAATTGGACGTAGGTATAAGACTCAATATGAAGAACTTAAAGCACAACAAGATA AGGTCATGGAGACCTCAGCTCAGTCTTCTGGAGACCATCAGGAACAGCATGTCTCAGTCC AGGAAATGCAGGAGCTTAAAGAAGCCCTTAACCAAGCTGAAGCAAAGTCAAAATCGCTTG AGAGTCAAGTAGAGAATCTGCAGAAGACATTATCTGAAAAAGAGATGGAAGCAAGAAATC TCCAGGAACAGACTGTGCAGCTTCAATCTGAACTTTCACGACTTCGCCAGGACCTTCAAG ATAGAACCACGCAGGAGGAGCAGCTCAGGCAGCAGATAACTGAAAAGGAAGAAAAAACAA GAAAGGCTATTGTAGCAGCAAAATCAAAAATTGCTCATTTAGCTGGTGTAAAAGATCAGC TAACCAAAGAAAATGAGGAGCTGAAACAAAGGAATGGAGCCTTAGATCAGCAGAAAGATG AGCTGGATGTTCGTATGACTGCTCTTAAGTCCCAGTATGAAGGTCGAATTAGTCGTTTGG AAAGAGAACTCAGGGAGCATCAAGAGAGACACCTTGAGCAGAGAGATGAGCCTCAAGAAC CTACTAATAAGGTCCCAGAACAGCAGAGACAGATCACATTGAAAACAACTCCAGCTTCTG |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 68-201, gnl|bosTau2|chr16 (49030293-49030426) | |
| 68-201, gnl|canFam2|chr7 (22371984-22372088) | |
| 68-201, gnl|danRer3|chr20 (42678655-42678759) | |
| 68-201, gnl|dasNov1|scaffold_784 (112218-112114) | |
| 68-201, gnl|echTel1|scaffold_311559 (48241-48345) | |
| 68-201, gnl|fr1|chrUn (175397899-175397795) | |
| 68-201, gnl|galGal2|chr8 (9888166-9888062) | |
| 68-201, gnl|hg17|chr1 (183041814-183041918) | |
| 68-201, gnl|Hg17|chr1 (183041950-183041817) | |
| 68-201, gnl|loxAfr1|scaffold_19259 (21037-20960) | |
| 68-201, gnl|mm7|chr1 (150352654-150352550) | |
| 68-201, gnl|Mm7|chr1 (150352516-150352649) | |
| 68-201, gnl|monDom2|scaffold_16 (40748127-40748231) | |
| 68-201, gnl|oryCun1|scaffold_127485 (4230-4126) | |
| 68-201, gnl|panTro1|chr1 (165622954-165623058) | |
| 68-201, gnl|rheMac2|chr1 (184385127-184385023) | |
| 68-201, gnl|rn3|chr13 (64744115-64744011) | |
| 68-201, gnl|tetNig1|chr1 (15410056-15409952) | |
| 68-201, gnl|xenTro1|scaffold_160 (1470485-1470383) | |
| 331-544, gnl|bosTau2|chr16 (49034127-49034341) | |
| 331-544, gnl|canFam2|chr7 (22369173-22369366) | |
| 331-544, gnl|danRer3|chr20 (42678126-42678319) | |
| 331-544, gnl|dasNov1|scaffold_784 (114294-114101) | |
| 331-544, gnl|echTel1|scaffold_311559 (45261-45450) | |
| 331-544, gnl|fr1|chrUn (175398434-175398256) | |
| 331-544, gnl|galGal2|chr8 (9889754-9889565) | |
| 331-544, gnl|hg17|chr1 (183038806-183038999) | |
| 331-544, gnl|Hg17|chr1 (183039034-183038820) | |
| 331-544, gnl|loxAfr1|scaffold_19259 (24265-24073) | |
| 331-544, gnl|mm7|chr1 (150355213-150355025) | |
| 331-544, gnl|Mm7|chr1 (150354988-150355202) | |
| 331-544, gnl|monDom2|scaffold_16 (40742315-40742495) | |
| 331-544, gnl|oryCun1|scaffold_202902 (31059-31251) | |
| 331-544, gnl|panTro1|chr1 (165619943-165620136) | |
| 331-544, gnl|rheMac2|chr1 (184388201-184388008) | |
| 331-544, gnl|rn3|chr13 (64746951-64746766) | |
| 331-544, gnl|tetNig1|chr1 (15410585-15410407) | |
| 331-544, gnl|xenTro1|scaffold_160 (1473125-1472928) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 68-201, gnl|bosTau2|chr16 (49030293-49030426) | |
| 68-201, gnl|canFam2|chr7 (22371984-22372088) | |
| 68-201, gnl|danRer3|chr20 (42678655-42678759) | |
| 68-201, gnl|dasNov1|scaffold_784 (112218-112114) | |
| 68-201, gnl|echTel1|scaffold_311559 (48241-48345) | |
| 68-201, gnl|fr1|chrUn (175397899-175397795) | |
| 68-201, gnl|galGal2|chr8 (9888166-9888062) | |
| 68-201, gnl|hg17|chr1 (183041814-183041918) | |
| 68-201, gnl|Hg17|chr1 (183041950-183041817) | |
| 68-201, gnl|loxAfr1|scaffold_19259 (21037-20960) | |
| 68-201, gnl|mm7|chr1 (150352654-150352550) | |
| 68-201, gnl|Mm7|chr1 (150352516-150352649) | |
| 68-201, gnl|monDom2|scaffold_16 (40748127-40748231) | |
| 68-201, gnl|oryCun1|scaffold_127485 (4230-4126) | |
| 68-201, gnl|panTro1|chr1 (165622954-165623058) | |
| 68-201, gnl|rheMac2|chr1 (184385127-184385023) | |
| 68-201, gnl|rn3|chr13 (64744115-64744011) | |
| 68-201, gnl|tetNig1|chr1 (15410056-15409952) | |
| 68-201, gnl|xenTro1|scaffold_160 (1470485-1470383) | |
| 331-544, gnl|bosTau2|chr16 (49034127-49034341) | |
| 331-544, gnl|canFam2|chr7 (22369173-22369366) | |
| 331-544, gnl|danRer3|chr20 (42678126-42678319) | |
| 331-544, gnl|dasNov1|scaffold_784 (114294-114101) | |
| 331-544, gnl|echTel1|scaffold_311559 (45261-45450) | |
| 331-544, gnl|fr1|chrUn (175398434-175398256) | |
| 331-544, gnl|galGal2|chr8 (9889754-9889565) | |
| 331-544, gnl|hg17|chr1 (183038806-183038999) | |
| 331-544, gnl|Hg17|chr1 (183039034-183038820) | |
| 331-544, gnl|loxAfr1|scaffold_19259 (24265-24073) | |
| 331-544, gnl|mm7|chr1 (150355213-150355025) | |
| 331-544, gnl|Mm7|chr1 (150354988-150355202) | |
| 331-544, gnl|monDom2|scaffold_16 (40742315-40742495) | |
| 331-544, gnl|oryCun1|scaffold_202902 (31059-31251) | |
| 331-544, gnl|panTro1|chr1 (165619943-165620136) | |
| 331-544, gnl|rheMac2|chr1 (184388201-184388008) | |
| 331-544, gnl|rn3|chr13 (64746951-64746766) | |
| 331-544, gnl|tetNig1|chr1 (15410585-15410407) | |
| 331-544, gnl|xenTro1|scaffold_160 (1473125-1472928) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jca (0.11396) |