Non-Coding RNA Search

Ss1.1-Ova1-OVRM10161A11.5

Sequence:


               
               AGAAACAAACTCATGAACATGAAGAACAGACTTGTGGTTGCAGAGGAGGGAGGGAGAGGG
ATGGACCAGGAATTTGGGTTTAATAGCTGCAGACTATTGCATTTGAAGTGGATGAGCAAC
GAGATCCTTCTGTATAGCACAGGGAACTTTATCTAGTTACTTGTGATGGAACATGATGGA
GGATAATGTGAGATAATATATATGTGTATGACTGGGTCACTTTGCTATACAGCAGAAATT
GACAGAACCATGTAAATCAACTACGATAGAAAATAAAAAACTAAAAAAAGACTGAAATAT
TAACTCTAACATAGAACATTTAGAACTGTGTTTAAACTAATCATTTGAAATTATAAGTGG
ATCAGAATTTAACTTCTCTTTAGGAACTTTAAAAATAAACTGTGTACATCATATCTGTTT
CCAAGGTTAATGTATCTGATACACTGTCTAAGAATATTAGAGTTGGACAACTATACAAAA
TCTATAGAATGCTGCAAAAGCAGTTCTTAGAGGAAAGTTCATAGTGATACAGGCCTTCTT
CAAAAAAAAAAAAAAAAAGAAAAATATGAACTCAACAACCTAACCTACCACCTAAAAGAA
TTAGCAAAAGAAGAGCAAACAAAACCCAGCAGAAGGAAGTCATAAAGATCAAAGAGGAAA
TCAATAAAATAGAGATTTCATAAAAACACAATAATACCAAGAGCTGGTTCTTTGAAAGGG
TAGACAAAATTGACAAACGTCTGGCCAGACTTACCATGAAGAAAAGAGAGAGAACCCAAA
TAAAATAAGAAATGTAAAAAGAGAAATCTGAACTGATAATGCAGAAATATAAAAACCCAT
AAGAAAGATACTATAAACAGATATATGCCAACAAATTTGACAGCCTAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAAACAAACTCATGAACATGAAGAACAGACTTGTGGTTGCAGAGGAGGGAGGGAGAGGG
ATGGACCAGGAATTTGGGTTTAATAGCTGCAGACTATTGCATTTGAAGTGGATGAGCAAC
GAGATCCTTCTGTATAGCACAGGGAACTTTATCTAGTTACTTGTGATGGAACATGATGGA
GGATAATGTGAGATAATATATATGTGTATGACTGGGTCACTTTGCTATACAGCAGAAATT
GACAGAACCATGTAAATCAACTACGATAGAAAATAAAAAACTAAAAAAAGACTGAAATAT
TAACTCTAACATAGAACATTTAGAACTGTGTTTAAACTAATCATTTGAAATTATAAGTGG
ATCAGAATTTAACTTCTCTTTAGGAACTTTAAAAATAAACTGTGTACATCATATCTGTTT
CCAAGGTTAATGTATCTGATACACTGTCTAAGAATATTAGAGTTGGACAACTATACAAAA
TCTATAGAATGCTGCAAAAGCAGTTCTTAGAGGAAAGTTCATAGTGATACAGGCCTTCTT
CAAAAAAAAAAAAAAAAAGAAAAATATGAACTCAACAACCTAACCTACCACCTAAAAGAA
TTAGCAAAAGAAGAGCAAACAAAACCCAGCAGAAGGAAGTCATAAAGATCAAAGAGGAAA
TCAATAAAATAGAGATTTCATAAAAACACAATAATACCAAGAGCTGGTTCTTTGAAAGGG
TAGACAAAATTGACAAACGTCTGGCCAGACTTACCATGAAGAAAAGAGAGAGAACCCAAA
TAAAATAAGAAATGTAAAAAGAGAAATCTGAACTGATAATGCAGAAATATAAAAACCCAT
AAGAAAGATACTATAAACAGATATATGCCAACAAATTTGACAGCCTAG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               2-289, gnl|bosTau2|chr1 (82936669-82936387)
               


               
               466-876, gnl|bosTau2|chr1 (38419864-38420266)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-289, gnl|bosTau2|chr1 (82936669-82936387)
               


               
               466-876, gnl|bosTau2|chr1 (38419864-38420266)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               clu (0.119646)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	2-289, gnl\|bosTau2\|chr1 (82936669-82936387)

	466-876, gnl\|bosTau2\|chr1 (38419864-38420266)