Ss1.1-Ova1-OVRM10162E12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGTAGATGCGGTGGCGGAGAGAGCCATGGAGCACGTGACGGAGGGTTCCTGGGAGTCGC TACCCGTGCCGCTGCACCCGCGGGTGTTGGATGTGCTGCAGGAGCTGGGTTTTCCGTACA TGACGCCGGTGCAGTCCGCAACCATCCCTCTGTTCATGAAAAACAAAGATGTTGCCGCTG AAGCGGTCACAGGCAGTGGCAAAACACTTGCTTTCGTCATCCCCATCCTGGAGATTCTCC TGAGAAGGGAGGAGAAGTTAAAAAAGAGTCAGGTTGGCGCCATAATCATCACACCCACAC GAGAGCTGGCTGTTCAGATAGATGAGGTCCTGTCGCATTTCACGAAGCCCTTCCCACAGT TCAGCCAGATTCTCTGGATTGGAGGCAGGAATCCTGGAGAAGATGTCGCCAGGTTTAAGG AACACGGTGGGAACATCATCGTGGCAACCCCAGGCCGCCTGGAGGACATGTTCCGAAGGA AGGCCGAGGGCCTGGACCTGGCCAGCTGTGTAAGGTCCCTGGATGTGCTGGTGTTGGACG AAGCGGACAGACTTCTGGACATGGGGTTTGAGGCGAGCATAAACACCATCTTGGAGTTTT TGCCGAAGCAGAGGAGAACAGGCCTTTTCTCGGCCACTCAGACGCAGGAAGTGGAGAACC TGGTGCGAGCAGGCCTCCGGAACCCTGTGCGCATCTCGGTGAAGGAGAAGGGGGCAGCAG CCAGCAGCACACAGAAGACCCCTTCCCGCCTAGAGAACTACTACATGGTGTGTAAGGCAG ACGAGAAGTTTAATCAGCTGGTCCATTTTCTTCGAAATCACAAGCAGGAGAAACACCTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGTAGATGCGGTGGCGGAGAGAGCCATGGAGCACGTGACGGAGGGTTCCTGGGAGTCGC TACCCGTGCCGCTGCACCCGCGGGTGTTGGATGTGCTGCAGGAGCTGGGTTTTCCGTACA TGACGCCGGTGCAGTCCGCAACCATCCCTCTGTTCATGAAAAACAAAGATGTTGCCGCTG AAGCGGTCACAGGCAGTGGCAAAACACTTGCTTTCGTCATCCCCATCCTGGAGATTCTCC TGAGAAGGGAGGAGAAGTTAAAAAAGAGTCAGGTTGGCGCCATAATCATCACACCCACAC GAGAGCTGGCTGTTCAGATAGATGAGGTCCTGTCGCATTTCACGAAGCCCTTCCCACAGT TCAGCCAGATTCTCTGGATTGGAGGCAGGAATCCTGGAGAAGATGTCGCCAGGTTTAAGG AACACGGTGGGAACATCATCGTGGCAACCCCAGGCCGCCTGGAGGACATGTTCCGAAGGA AGGCCGAGGGCCTGGACCTGGCCAGCTGTGTAAGGTCCCTGGATGTGCTGGTGTTGGACG AAGCGGACAGACTTCTGGACATGGGGTTTGAGGCGAGCATAAACACCATCTTGGAGTTTT TGCCGAAGCAGAGGAGAACAGGCCTTTTCTCGGCCACTCAGACGCAGGAAGTGGAGAACC TGGTGCGAGCAGGCCTCCGGAACCCTGTGCGCATCTCGGTGAAGGAGAAGGGGGCAGCAG CCAGCAGCACACAGAAGACCCCTTCCCGCCTAGAGAACTACTACATGGTGTGTAAGGCAG ACGAGAAGTTTAATCAGCTGGTCCATTTTCTTCGAAATCACAAGCAGGAGAAACACCTGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 3-134, gnl|bosTau2|chr17 (26572614-26572744) | |
| 3-134, gnl|Hg17|chr12 (122611546-122611683) | |
| 3-134, gnl|Mm7|chr5 (123798754-123798902) | |
| 576-770, gnl|bosTau2|chr17 (26581092-26581286) | |
| 576-770, gnl|canFam2|chr26 (9045917-9045727) | |
| 576-770, gnl|danRer3|chrNA (218928341-218928535) | |
| 576-770, gnl|dasNov1|scaffold_23632 (810-1000) | |
| 576-770, gnl|echTel1|scaffold_199485 (5264-5454) | |
| 576-770, gnl|fr1|chrUn (35786098-35786292) | |
| 576-770, gnl|galGal2|chr15 (4914385-4914191) | |
| 576-770, gnl|hg17|chr12 (11557094-11557283) | |
| 576-770, gnl|Hg17|chr12 (122619364-122619558) | |
| 576-770, gnl|loxAfr1|scaffold_1248 (508-702) | |
| 576-770, gnl|mm7|chr5 (123804990-123805184) | |
| 576-770, gnl|Mm7|chr5 (123804989-123805183) | |
| 576-770, gnl|monDom2|scaffold_97 (4101265-4101459) | |
| 576-770, gnl|oryCun1|scaffold_107413 (18713-18887) | |
| 576-770, gnl|panTro1|chr10 (12148821-12149010) | |
| 576-770, gnl|rheMac2|chr11 (11862889-11863078) | |
| 576-770, gnl|rn3|chr12 (33020416-33020224) | |
| 576-770, gnl|tetNig1|chrUn_random (1204569-1204763) | |
| 576-770, gnl|xenTro1|scaffold_100 (2208110-2208302) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-134, gnl|bosTau2|chr17 (26572614-26572744) | |
| 3-134, gnl|Hg17|chr12 (122611546-122611683) | |
| 3-134, gnl|Mm7|chr5 (123798754-123798902) | |
| 576-770, gnl|bosTau2|chr17 (26581092-26581286) | |
| 576-770, gnl|canFam2|chr26 (9045917-9045727) | |
| 576-770, gnl|danRer3|chrNA (218928341-218928535) | |
| 576-770, gnl|dasNov1|scaffold_23632 (810-1000) | |
| 576-770, gnl|echTel1|scaffold_199485 (5264-5454) | |
| 576-770, gnl|fr1|chrUn (35786098-35786292) | |
| 576-770, gnl|galGal2|chr15 (4914385-4914191) | |
| 576-770, gnl|hg17|chr12 (11557094-11557283) | |
| 576-770, gnl|Hg17|chr12 (122619364-122619558) | |
| 576-770, gnl|loxAfr1|scaffold_1248 (508-702) | |
| 576-770, gnl|mm7|chr5 (123804990-123805184) | |
| 576-770, gnl|Mm7|chr5 (123804989-123805183) | |
| 576-770, gnl|monDom2|scaffold_97 (4101265-4101459) | |
| 576-770, gnl|oryCun1|scaffold_107413 (18713-18887) | |
| 576-770, gnl|panTro1|chr10 (12148821-12149010) | |
| 576-770, gnl|rheMac2|chr11 (11862889-11863078) | |
| 576-770, gnl|rn3|chr12 (33020416-33020224) | |
| 576-770, gnl|tetNig1|chrUn_random (1204569-1204763) | |
| 576-770, gnl|xenTro1|scaffold_100 (2208110-2208302) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ece (0.229305) | |
| pgl (0.118483) |