Non-Coding RNA Search

Ss1.1-Ova1-OVRM10166E02.5

Sequence:


               
               CTCGCTTCTCGTGCAGGAGGGAGTCCCGCCCCCCCTCCTACTGGAAGTCTGTTGGGCTGC
AGGCGGGTCACTCCGACCCATGCAATCCTGTGGCGGGCGGTCCCGGGAGCGGATTGGCTC
TGAGAGTTTCCAGAAGGCGGCAGAGAGGCGACTATAAGAGCGGGCAGCCGAGCCGGGGGG
AGCGAGAGACGCTGGTTGCGCTCGTAGTGTGTGGTGCAAGCGACCGTTAGCTGAGGCCGC
GGATTTTCTGTGCCAGGTGTTCTCGTCTAACGTCGCTTGCTCGTCTTTCAGTCAGGATGT
CTGCCCGCGGCCCGGCTATCGGCATCGACCTGGGCACTACCTACTCGTGCGTGGGGGTCT
TCCAACATGGCAAGGTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACCCCCAGCT
ACGTGGCCTTCACCGACACCGAGCGCCTCATCGGCGACGCCGCCAAGAACCAGGTGGCCA
TGAACCCCACGAACACCATCTTCGACGCCAAGAGGCTGATCGGACGGAAGTTCGAGGACG
CCACAGTGCAATCGGACATGAAACACTGGCCATTCCGGGTGGTGAGCGAGGGAGGGAAGC
CCAAAGTGCATGTGGAGTACAAGGGAGAGATCAAGACCTTCTTCCCGGAGGAGATCTCTT
CCATGGTCCTCACTAAGATGAAGGAGATCGCCGAAGCCTACCTGGGGGGCAAGGTGCAGA
GCGCGGTCTTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCGCTTCTCGTGCAGGAGGGAGTCCCGCCCCCCCTCCTACTGGAAGTCTGTTGGGCTGC
AGGCGGGTCACTCCGACCCATGCAATCCTGTGGCGGGCGGTCCCGGGAGCGGATTGGCTC
TGAGAGTTTCCAGAAGGCGGCAGAGAGGCGACTATAAGAGCGGGCAGCCGAGCCGGGGGG
AGCGAGAGACGCTGGTTGCGCTCGTAGTGTGTGGTGCAAGCGACCGTTAGCTGAGGCCGC
GGATTTTCTGTGCCAGGTGTTCTCGTCTAACGTCGCTTGCTCGTCTTTCAGTCAGGATGT
CTGCCCGCGGCCCGGCTATCGGCATCGACCTGGGCACTACCTACTCGTGCGTGGGGGTCT
TCCAACATGGCAAGGTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACCCCCAGCT
ACGTGGCCTTCACCGACACCGAGCGCCTCATCGGCGACGCCGCCAAGAACCAGGTGGCCA
TGAACCCCACGAACACCATCTTCGACGCCAAGAGGCTGATCGGACGGAAGTTCGAGGACG
CCACAGTGCAATCGGACATGAAACACTGGCCATTCCGGGTGGTGAGCGAGGGAGGGAAGC
CCAAAGTGCATGTGGAGTACAAGGGAGAGATCAAGACCTTCTTCCCGGAGGAGATCTCTT
CCATGGTCCTCACTAAGATGAAGGAGATCGCCGAAGCCTACCTGGGGGGCAAGGTGCAGA
GCGCGGTCTTCA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               20-732, gnl|bosTau2|chr10 (51573071-51572359)
               

               
               20-732, gnl|Hg17|chr14 (64077040-64077756)
               

               
               20-732, gnl|Mm7|chr12 (74362415-74363155)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               20-732, gnl|bosTau2|chr10 (51573071-51572359)
               

               
               20-732, gnl|Hg17|chr14 (64077040-64077756)
               

               
               20-732, gnl|Mm7|chr12 (74362415-74363155)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nep (0.183925)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)

	20-732, gnl\|bosTau2\|chr10 (51573071-51572359)
	20-732, gnl\|Hg17\|chr14 (64077040-64077756)
	20-732, gnl\|Mm7\|chr12 (74362415-74363155)