Ss1.1-Ova1-OVRM10170F09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGCTGCTTCTCGCCCTTGGCTCCTAATCCCCTTCCCGGGACCCTGAACTTGGGGCGACA AGGTTTTTGCTCTTCTCCGGGTGTCGGGCTCTTCTCTACTCGGATCGTGTCCTAGGAATG CCCTAAGATTGCGGCGGATTCGCCCCCCGGAGAGCTGACTGCCCTGGACGGCTGCTGACC TCTGGCAGAACTGAACCAAAATGTCCCCGGAATCTAAAAAGCTTTTCAACATCATTATTT TAGGAATTGCCTTTATGTTCATGTTCACCGCCTTTCAAACTTGTGGAAATGTAGCGCAAA CTGTCATCAGGAGCTTAAATAGCACAGATTTTCACGGCAGTGGATATACCAGCATGGCAA TTATTTATGGAGTGTTCTCTGCTTCAAATTTGATTACACCATCAGTGGTCGCCATTGTAG GACCTCAGCTGTCTATGTTTGCTAGTGGCTTATTTTACAGCATGTACATTGCCGTTTTTA TCCAGCCTTTCCCGTGGTCCTTCTACACGGCCTCTGTTTTCATTGGAATTGCAGCCGCTG TACTTTGGACAGCGCAAGGAAACTGCCTGACGATAAATTCAGATGAGCACACGATTGGGA GAAACAGTGGAATCTTCTGGGCACTCTTACAATCTAGCTTGTTCTTTGGAAATCTCTACA TCTATTTTGCTTGGCAGGGGAAAACTCAGATATCAGAGAGTGACCGGCGAACAGTGTTTA TTGCCCTGACGGTCATTAGCCTTGTGGGGACCGTCCTTTTCTTTCTCATTCGGAAACCAG ATTCTGAAAATGTCCTGGGAGAAGATGAATCTTCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGCTGCTTCTCGCCCTTGGCTCCTAATCCCCTTCCCGGGACCCTGAACTTGGGGCGACA AGGTTTTTGCTCTTCTCCGGGTGTCGGGCTCTTCTCTACTCGGATCGTGTCCTAGGAATG CCCTAAGATTGCGGCGGATTCGCCCCCCGGAGAGCTGACTGCCCTGGACGGCTGCTGACC TCTGGCAGAACTGAACCAAAATGTCCCCGGAATCTAAAAAGCTTTTCAACATCATTATTT TAGGAATTGCCTTTATGTTCATGTTCACCGCCTTTCAAACTTGTGGAAATGTAGCGCAAA CTGTCATCAGGAGCTTAAATAGCACAGATTTTCACGGCAGTGGATATACCAGCATGGCAA TTATTTATGGAGTGTTCTCTGCTTCAAATTTGATTACACCATCAGTGGTCGCCATTGTAG GACCTCAGCTGTCTATGTTTGCTAGTGGCTTATTTTACAGCATGTACATTGCCGTTTTTA TCCAGCCTTTCCCGTGGTCCTTCTACACGGCCTCTGTTTTCATTGGAATTGCAGCCGCTG TACTTTGGACAGCGCAAGGAAACTGCCTGACGATAAATTCAGATGAGCACACGATTGGGA GAAACAGTGGAATCTTCTGGGCACTCTTACAATCTAGCTTGTTCTTTGGAAATCTCTACA TCTATTTTGCTTGGCAGGGGAAAACTCAGATATCAGAGAGTGACCGGCGAACAGTGTTTA TTGCCCTGACGGTCATTAGCCTTGTGGGGACCGTCCTTTTCTTTCTCATTCGGAAACCAG ATTCTGAAAATGTCCTGGGAGAAGATGAATCTTCTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 122-296, gnl|bosTau2|chr19 (49897960-49897782) | |
| 122-296, gnl|Hg17|chr17 (72245954-72246125) | |
| 122-296, gnl|Mm7|chr11 (116963040-116963218) | |
| 350-460, gnl|bosTau2|chr19 (49895645-49895535) | |
| 350-460, gnl|canFam2|chr9 (7023746-7023604) | |
| 350-460, gnl|danRer3|chrNA (127049798-127049940) | |
| 350-460, gnl|dasNov1|scaffold_99543 (5572-5714) | |
| 350-460, gnl|echTel1|scaffold_36810 (241-103) | |
| 350-460, gnl|fr1|chrUn (131730456-131730338) | |
| 350-460, gnl|galGal2|chr18 (4066084-4065943) | |
| 350-460, gnl|hg17|chr17 (72248612-72248754) | |
| 350-460, gnl|Hg17|chr17 (72248631-72248741) | |
| 350-460, gnl|loxAfr1|scaffold_5472 (87335-87477) | |
| 350-460, gnl|mm7|chr11 (116967501-116967639) | |
| 350-460, gnl|Mm7|chr11 (116967516-116967626) | |
| 350-460, gnl|monDom2|scaffold_18 (4222750-4222881) | |
| 350-460, gnl|oryCun1|scaffold_204615 (10727-10585) | |
| 350-460, gnl|panTro1|chr19 (75619153-75619295) | |
| 350-460, gnl|rheMac2|chr16 (72101046-72101188) | |
| 350-460, gnl|rn3|chr10 (106976386-106976524) | |
| 350-460, gnl|tetNig1|chr3 (13973818-13973697) | |
| 350-460, gnl|xenTro1|scaffold_135 (1613137-1613007) | |
| 695-816, gnl|bosTau2|chr19 (49890678-49890557) | |
| 695-816, gnl|canFam2|chr9 (7020012-7019918) | |
| 695-816, gnl|dasNov1|scaffold_135493 (3172-3266) | |
| 695-816, gnl|fr1|chrUn (131729668-131729576) | |
| 695-816, gnl|galGal2|chr18 (4062240-4062146) | |
| 695-816, gnl|hg17|chr17 (72251996-72252090) | |
| 695-816, gnl|Hg17|chr17 (72251997-72252118) | |
| 695-816, gnl|loxAfr1|scaffold_5472 (92248-92342) | |
| 695-816, gnl|mm7|chr11 (116970565-116970659) | |
| 695-816, gnl|Mm7|chr11 (116970566-116970687) | |
| 695-816, gnl|monDom2|scaffold_18 (4227795-4227889) | |
| 695-816, gnl|oryCun1|scaffold_204615 (5858-5764) | |
| 695-816, gnl|panTro1|chr19 (75622545-75622639) | |
| 695-816, gnl|rheMac2|chr16 (72104826-72104920) | |
| 695-816, gnl|rn3|chr10 (106980693-106980787) | |
| 695-816, gnl|tetNig1|chr3 (13973000-13972909) | |
| 695-816, gnl|xenTro1|scaffold_135 (1609754-1609660) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 122-296, gnl|bosTau2|chr19 (49897960-49897782) | |
| 122-296, gnl|Hg17|chr17 (72245954-72246125) | |
| 122-296, gnl|Mm7|chr11 (116963040-116963218) | |
| 350-460, gnl|bosTau2|chr19 (49895645-49895535) | |
| 350-460, gnl|canFam2|chr9 (7023746-7023604) | |
| 350-460, gnl|danRer3|chrNA (127049798-127049940) | |
| 350-460, gnl|dasNov1|scaffold_99543 (5572-5714) | |
| 350-460, gnl|echTel1|scaffold_36810 (241-103) | |
| 350-460, gnl|fr1|chrUn (131730456-131730338) | |
| 350-460, gnl|galGal2|chr18 (4066084-4065943) | |
| 350-460, gnl|hg17|chr17 (72248612-72248754) | |
| 350-460, gnl|Hg17|chr17 (72248631-72248741) | |
| 350-460, gnl|loxAfr1|scaffold_5472 (87335-87477) | |
| 350-460, gnl|mm7|chr11 (116967501-116967639) | |
| 350-460, gnl|Mm7|chr11 (116967516-116967626) | |
| 350-460, gnl|monDom2|scaffold_18 (4222750-4222881) | |
| 350-460, gnl|oryCun1|scaffold_204615 (10727-10585) | |
| 350-460, gnl|panTro1|chr19 (75619153-75619295) | |
| 350-460, gnl|rheMac2|chr16 (72101046-72101188) | |
| 350-460, gnl|rn3|chr10 (106976386-106976524) | |
| 350-460, gnl|tetNig1|chr3 (13973818-13973697) | |
| 350-460, gnl|xenTro1|scaffold_135 (1613137-1613007) | |
| 695-816, gnl|bosTau2|chr19 (49890678-49890557) | |
| 695-816, gnl|canFam2|chr9 (7020012-7019918) | |
| 695-816, gnl|dasNov1|scaffold_135493 (3172-3266) | |
| 695-816, gnl|fr1|chrUn (131729668-131729576) | |
| 695-816, gnl|galGal2|chr18 (4062240-4062146) | |
| 695-816, gnl|hg17|chr17 (72251996-72252090) | |
| 695-816, gnl|Hg17|chr17 (72251997-72252118) | |
| 695-816, gnl|loxAfr1|scaffold_5472 (92248-92342) | |
| 695-816, gnl|mm7|chr11 (116970565-116970659) | |
| 695-816, gnl|Mm7|chr11 (116970566-116970687) | |
| 695-816, gnl|monDom2|scaffold_18 (4227795-4227889) | |
| 695-816, gnl|oryCun1|scaffold_204615 (5858-5764) | |
| 695-816, gnl|panTro1|chr19 (75622545-75622639) | |
| 695-816, gnl|rheMac2|chr16 (72104826-72104920) | |
| 695-816, gnl|rn3|chr10 (106980693-106980787) | |
| 695-816, gnl|tetNig1|chr3 (13973000-13972909) | |
| 695-816, gnl|xenTro1|scaffold_135 (1609754-1609660) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eje (0.0988338) |