Ss1.1-Ova1-OVRM10174F10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAAATTTATTTGAATCAGTTCAAATCAAAACTCAAGAATCTAGATTTACATACATTACAG AAGGATAAAGTTATAGCAAAATTAAAGTGATTGCAGAGTGTATAGATAGCTCAATTCCTA TGACATAAAATTTAAATCCACAGATGAAACTCTTTAAGCTCTTTACTGCCATGTCATATT CTGATTCCAGAGAGTAGAAAACCATTTGGACATGTTAAATCTCAAACTTTTAATCCTGAA ATCCATCAGTATATATCAAACACTGAATGTTTTCTAGTAAATAAGTCTTTAAAAAAAAAA AAAAAGGGTTACTAAAACTATGAAAACACCTATCAGACCCTCTATGGCATTTTTTTCCTG AAGTGTCAATCAGCTTGAGATCAGCCTAGAGGTGAGGCAGCCTCAGAAGCACCACCAGCT TCTTCCTGTAAATCACCCCCAGCAGAGGATTCTGACTCAACTGGAGAATTTTCTTCTAGT TCAGCATTTTCACCATGGCTTTCATTTTCTGTTGTACCTTTACCACTATCGATGGCAACA GCTTCATCCAGGGGCGTGCCTGTAACCTCTAAGGTCACTTCAGGGCCAACCTCTGCGGTT TCGACCGTCGCTGCCGCATCTGTCACCTCTGGCCCAGTTTCAGCACCGAGGGTCTCCGCA GGAGCAGCCTCCATGTTGTCTGGACAGGGGGAAGCCTCTTCAATAGCTGTCACTGTGGCC TGGGGAGTATCTTCAGCATCTACCACTGGTGCTTCCGCTAAAGATACCACAGGGGCGTCT GAACTGGCTTCCTCGGCACTCACAAGGTTCTCTTTTTCACCTTGAGGTGGATGTAACTCT GCTTTGGTTTTTTCTTTCATGTTTGCTGTATGTTCGCTGTGTTTGGCTTGCCTTTTGACT GTCTTGTAAGTATAATATCCACCAGCACTGACTGTGACACCTACAAGCAGATAATACATC ATATTTGATCCAGATGTTCCAGGGAATTTGTTAGATGACATCCAGCGAAGAGATGCGTCC TTCCGGAGTGGTGCGGGTCCTGGGGGCGCCCTCAGAGGCAGCGCGAGGGTCTTGGAGACC GCCCTGCGGAGGTACATCGCGCCAGTTGCCTCCAGCGCAGCAGCTGCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAAATTTATTTGAATCAGTTCAAATCAAAACTCAAGAATCTAGATTTACATACATTACAG AAGGATAAAGTTATAGCAAAATTAAAGTGATTGCAGAGTGTATAGATAGCTCAATTCCTA TGACATAAAATTTAAATCCACAGATGAAACTCTTTAAGCTCTTTACTGCCATGTCATATT CTGATTCCAGAGAGTAGAAAACCATTTGGACATGTTAAATCTCAAACTTTTAATCCTGAA ATCCATCAGTATATATCAAACACTGAATGTTTTCTAGTAAATAAGTCTTTAAAAAAAAAA AAAAAGGGTTACTAAAACTATGAAAACACCTATCAGACCCTCTATGGCATTTTTTTCCTG AAGTGTCAATCAGCTTGAGATCAGCCTAGAGGTGAGGCAGCCTCAGAAGCACCACCAGCT TCTTCCTGTAAATCACCCCCAGCAGAGGATTCTGACTCAACTGGAGAATTTTCTTCTAGT TCAGCATTTTCACCATGGCTTTCATTTTCTGTTGTACCTTTACCACTATCGATGGCAACA GCTTCATCCAGGGGCGTGCCTGTAACCTCTAAGGTCACTTCAGGGCCAACCTCTGCGGTT TCGACCGTCGCTGCCGCATCTGTCACCTCTGGCCCAGTTTCAGCACCGAGGGTCTCCGCA GGAGCAGCCTCCATGTTGTCTGGACAGGGGGAAGCCTCTTCAATAGCTGTCACTGTGGCC TGGGGAGTATCTTCAGCATCTACCACTGGTGCTTCCGCTAAAGATACCACAGGGGCGTCT GAACTGGCTTCCTCGGCACTCACAAGGTTCTCTTTTTCACCTTGAGGTGGATGTAACTCT GCTTTGGTTTTTTCTTTCATGTTTGCTGTATGTTCGCTGTGTTTGGCTTGCCTTTTGACT GTCTTGTAAGTATAATATCCACCAGCACTGACTGTGACACCTACAAGCAGATAATACATC ATATTTGATCCAGATGTTCCAGGGAATTTGTTAGATGACATCCAGCGAAGAGATGCGTCC TTCCGGAGTGGTGCGGGTCCTGGGGGCGCCCTCAGAGGCAGCGCGAGGGTCTTGGAGACC GCCCTGCGGAGGTACATCGCGCCAGTTGCCTCCAGCGCAGCAGCTGCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 1-251, gnl|bosTau2|chr17 (12909026-12908778) | |
| 1-251, gnl|canFam2|chr19 (6424828-6424552) | |
| 1-251, gnl|dasNov1|scaffold_41747 (5785-5536) | |
| 1-251, gnl|echTel1|scaffold_160217 (3471-3208) | |
| 1-251, gnl|hg17|chr4 (140544913-140545218) | |
| 1-251, gnl|Hg17|chr4 (140544932-140545217) | |
| 1-251, gnl|loxAfr1|scaffold_72437 (211-470) | |
| 1-251, gnl|mm7|chr3 (51512933-51513190) | |
| 1-251, gnl|Mm7|chr3 (51512952-51513190) | |
| 1-251, gnl|monDom2|scaffold_9 (6743276-6743569) | |
| 1-251, gnl|oryCun1|scaffold_208317 (18001-18263) | |
| 1-251, gnl|panTro1|chr3 (157795083-157795388) | |
| 1-251, gnl|rheMac2|chr5 (131730543-131730850) | |
| 1-251, gnl|rn3|chr2 (140232184-140232440) | |
| 276-823, gnl|bosTau2|chr17 (12908781-12908231) | |
| 276-823, gnl|Hg17|chr4 (140545215-140545803) | |
| 276-823, gnl|Mm7|chr3 (51513187-51513854) | |
| 912-1016, gnl|bosTau2|chr17 (12901771-12901667) | |
| 912-1016, gnl|canFam2|chr19 (6417277-6417115) | |
| 912-1016, gnl|echTel1|scaffold_220416 (5441-5279) | |
| 912-1016, gnl|hg17|chr4 (140554019-140554182) | |
| 912-1016, gnl|Hg17|chr4 (140554048-140554152) | |
| 912-1016, gnl|loxAfr1|scaffold_72437 (8174-8336) | |
| 912-1016, gnl|mm7|chr3 (51516329-51516486) | |
| 912-1016, gnl|Mm7|chr3 (51516353-51516457) | |
| 912-1016, gnl|monDom2|scaffold_9 (6749778-6749942) | |
| 912-1016, gnl|oryCun1|scaffold_208317 (27865-28023) | |
| 912-1016, gnl|panTro1|chr3_random (16534891-16534728) | |
| 912-1016, gnl|rheMac2|chr5 (131738316-131738479) | |
| 912-1016, gnl|rn3|chr2 (140235633-140235791) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-251, gnl|bosTau2|chr17 (12909026-12908778) | |
| 1-251, gnl|canFam2|chr19 (6424828-6424552) | |
| 1-251, gnl|dasNov1|scaffold_41747 (5785-5536) | |
| 1-251, gnl|echTel1|scaffold_160217 (3471-3208) | |
| 1-251, gnl|hg17|chr4 (140544913-140545218) | |
| 1-251, gnl|Hg17|chr4 (140544932-140545217) | |
| 1-251, gnl|loxAfr1|scaffold_72437 (211-470) | |
| 1-251, gnl|mm7|chr3 (51512933-51513190) | |
| 1-251, gnl|Mm7|chr3 (51512952-51513190) | |
| 1-251, gnl|monDom2|scaffold_9 (6743276-6743569) | |
| 1-251, gnl|oryCun1|scaffold_208317 (18001-18263) | |
| 1-251, gnl|panTro1|chr3 (157795083-157795388) | |
| 1-251, gnl|rheMac2|chr5 (131730543-131730850) | |
| 1-251, gnl|rn3|chr2 (140232184-140232440) | |
| 276-823, gnl|bosTau2|chr17 (12908781-12908231) | |
| 276-823, gnl|Hg17|chr4 (140545215-140545803) | |
| 276-823, gnl|Mm7|chr3 (51513187-51513854) | |
| 912-1016, gnl|bosTau2|chr17 (12901771-12901667) | |
| 912-1016, gnl|canFam2|chr19 (6417277-6417115) | |
| 912-1016, gnl|echTel1|scaffold_220416 (5441-5279) | |
| 912-1016, gnl|hg17|chr4 (140554019-140554182) | |
| 912-1016, gnl|Hg17|chr4 (140554048-140554152) | |
| 912-1016, gnl|loxAfr1|scaffold_72437 (8174-8336) | |
| 912-1016, gnl|mm7|chr3 (51516329-51516486) | |
| 912-1016, gnl|Mm7|chr3 (51516353-51516457) | |
| 912-1016, gnl|monDom2|scaffold_9 (6749778-6749942) | |
| 912-1016, gnl|oryCun1|scaffold_208317 (27865-28023) | |
| 912-1016, gnl|panTro1|chr3_random (16534891-16534728) | |
| 912-1016, gnl|rheMac2|chr5 (131738316-131738479) | |
| 912-1016, gnl|rn3|chr2 (140235633-140235791) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| sug (1.01833) | |
| gul (0.177588) | |
| eye (0.170503) | |
| pgl (0.118483) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sug (1.01833) | |
| gul (0.177588) | |
| eye (0.170503) | |
| pgl (0.118483) |