Non-Coding RNA Search

Ss1.1-Ova1-OVRM10188H10.5

Sequence:


               
               TGGTCGCCGCTGCGCCGCAGCCGCGCATCGCAGCGATCTGAGTGCTCGCACGGCTGCTGT
TTCCACGCCGGGTGCCGAGGACGGCTCCTCCCTAGGCGCAGGGGCCGGGCCGAGTGGGTC
TGCGCTCGCCCTGCGCCCCTCTCCGCGCCCCTACCCCTGGCCCTGCGCCCCGACTTGGGT
TCCAGGGCGCTAGAGCTAACGCCCACCCGGTCCAGGCCCCGCTCCGTGTTTTCCCTTCTT
TTCCAGCCGATGTAGGTTCTCCTTCCCCACGGTTGTGTCCAGTGGCCTCAGGGCTCGGGA
GTTTCGGTTGAGCCTACTCTACCGTTTAGTAATGGGACTCTGGAACCTGGGAGGCCCGGA
GAGCCGCCCTTAGGGGCTCCCTGTCGCCAGCCTCCACCTTTTTCTCCAAAGTTGAGGATC
CTTTTCCTGTCCCCTCAAACTCACTACCGCCAGAGGTGCCATGGCCTCCAGGCCATGGAG
CGAGTGGAGCGCTTCCCTGTCCCACCTGGTACTGGGAACGGTGTCTCTGCATGCGGCGGT
GAGCACTGCCCAGGCAAGTCGAGGGGCCGCTGCTGGCTTCCTGCTCCAGGCCTTGGCCGC
TGCCACCACGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGTCGCCGCTGCGCCGCAGCCGCGCATCGCAGCGATCTGAGTGCTCGCACGGCTGCTGT
TTCCACGCCGGGTGCCGAGGACGGCTCCTCCCTAGGCGCAGGGGCCGGGCCGAGTGGGTC
TGCGCTCGCCCTGCGCCCCTCTCCGCGCCCCTACCCCTGGCCCTGCGCCCCGACTTGGGT
TCCAGGGCGCTAGAGCTAACGCCCACCCGGTCCAGGCCCCGCTCCGTGTTTTCCCTTCTT
TTCCAGCCGATGTAGGTTCTCCTTCCCCACGGTTGTGTCCAGTGGCCTCAGGGCTCGGGA
GTTTCGGTTGAGCCTACTCTACCGTTTAGTAATGGGACTCTGGAACCTGGGAGGCCCGGA
GAGCCGCCCTTAGGGGCTCCCTGTCGCCAGCCTCCACCTTTTTCTCCAAAGTTGAGGATC
CTTTTCCTGTCCCCTCAAACTCACTACCGCCAGAGGTGCCATGGCCTCCAGGCCATGGAG
CGAGTGGAGCGCTTCCCTGTCCCACCTGGTACTGGGAACGGTGTCTCTGCATGCGGCGGT
GAGCACTGCCCAGGCAAGTCGAGGGGCCGCTGCTGGCTTCCTGCTCCAGGCCTTGGCCGC
TGCCACCACGCT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               159-559, gnl|bosTau2|chr14 (3298223-3298611)
               

               
               159-559, gnl|Hg17|chr8 (145661456-145660994)
               

               
               159-559, gnl|Mm7|chr15 (76742160-76741765)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               159-559, gnl|bosTau2|chr14 (3298223-3298611)
               

               
               159-559, gnl|Hg17|chr8 (145661456-145660994)
               

               
               159-559, gnl|Mm7|chr15 (76742160-76741765)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ill (0.175593)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)

	159-559, gnl\|bosTau2\|chr14 (3298223-3298611)
	159-559, gnl\|Hg17\|chr8 (145661456-145660994)
	159-559, gnl\|Mm7\|chr15 (76742160-76741765)