Ss1.1-Ova1-OVRM10192A04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGATACATAGTACAGGACCTCATGGAAACAGATCTCTACAAGCTCTTGAAGACGCAGCA CCTCAGCAAGCGACCATATCTGCTATTTTCTTTACCAGATCCTCAGAGGGTTAAAATATA TCCATTCAGCTAACGTACTGCACCGTGACCTCAAACCTTCCAACCTGCTGCTCAACACCA CCTGCGATCTCAAGATCTGTGACTTTGGGTTGGCCCGTGTTGCAGATCCAGACCATGATC ACACAGGGTTCCTGACGGAGTATGTCGCCACACGTTGGTACAGGGCTCCAGAAATTATGT TAAATTCCAAGGGCTACACCAAGTCCATCGACATCTGGTCTGTCGGCTGCATCTTGGCAG AGATGCTCTCCAACAGGCCCATCTTCCCGGGGAAGCATTATCTCGACCAGCTGAACCACA TTCTGGGTATTCTTGGATCCCCATCACAGGAAGACCTGAATTGTATAATAAATTTAAAAG CTAGAAACTATTTGCTTTCTCTTCCACACAAAAATAAGGTGCCATGGAACAGGCTGTTCC CAAATGCTGACTCCAAAGCTCTGGATTTACTGGACAAAATGTTGACATTCAACCCTCACA AGAGGATTGAAGTAGAGCAGGCTCTTGCCCACCCATACCTGGAGCAGTATTATGACCCAA GTGATGAGCCCATCGCTGAAGCACCATTCAAGTTTGACATGGAATTGGATGACTTGCCCA AGGAAAAGCTCAAAGAGCTCATTTTTGAAGAGACCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGATACATAGTACAGGACCTCATGGAAACAGATCTCTACAAGCTCTTGAAGACGCAGCA CCTCAGCAAGCGACCATATCTGCTATTTTCTTTACCAGATCCTCAGAGGGTTAAAATATA TCCATTCAGCTAACGTACTGCACCGTGACCTCAAACCTTCCAACCTGCTGCTCAACACCA CCTGCGATCTCAAGATCTGTGACTTTGGGTTGGCCCGTGTTGCAGATCCAGACCATGATC ACACAGGGTTCCTGACGGAGTATGTCGCCACACGTTGGTACAGGGCTCCAGAAATTATGT TAAATTCCAAGGGCTACACCAAGTCCATCGACATCTGGTCTGTCGGCTGCATCTTGGCAG AGATGCTCTCCAACAGGCCCATCTTCCCGGGGAAGCATTATCTCGACCAGCTGAACCACA TTCTGGGTATTCTTGGATCCCCATCACAGGAAGACCTGAATTGTATAATAAATTTAAAAG CTAGAAACTATTTGCTTTCTCTTCCACACAAAAATAAGGTGCCATGGAACAGGCTGTTCC CAAATGCTGACTCCAAAGCTCTGGATTTACTGGACAAAATGTTGACATTCAACCCTCACA AGAGGATTGAAGTAGAGCAGGCTCTTGCCCACCCATACCTGGAGCAGTATTATGACCCAA GTGATGAGCCCATCGCTGAAGCACCATTCAAGTTTGACATGGAATTGGATGACTTGCCCA AGGAAAAGCTCAAAGAGCTCATTTTTGAAGAGACCG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 1-197, gnl|bosTau2|chr17 (45548140-45547945) | |
| 1-197, gnl|canFam2|chr26 (34117038-34117274) | |
| 1-197, gnl|danRer3|chr5 (3547401-3547179) | |
| 1-197, gnl|dasNov1|scaffold_114726 (3825-4061) | |
| 1-197, gnl|echTel1|scaffold_55628 (5294-5058) | |
| 1-197, gnl|fr1|chrUn (129153407-129153618) | |
| 1-197, gnl|galGal2|chr15 (503579-503342) | |
| 1-197, gnl|hg17|chr22 (20484671-20484907) | |
| 1-197, gnl|Hg17|chr22 (20484885-20484690) | |
| 1-197, gnl|loxAfr1|scaffold_11360 (41002-41238) | |
| 1-197, gnl|mm7|chr16 (16568231-16567993) | |
| 1-197, gnl|Mm7|chr16 (16568015-16568210) | |
| 1-197, gnl|monDom2|scaffold_214 (779165-778944) | |
| 1-197, gnl|oryCun1|scaffold_124602 (1711-1501) | |
| 1-197, gnl|panTro1|chr23 (20512678-20512914) | |
| 1-197, gnl|rheMac2|chr10 (65562868-65563103) | |
| 1-197, gnl|tetNig1|chr12 (3778597-3778808) | |
| 1-197, gnl|xenTro1|scaffold_118 (215575-215357) | |
| 426-558, gnl|bosTau2|chr17 (45538283-45538151) | |
| 426-558, gnl|canFam2|chr26 (34102031-34102188) | |
| 426-558, gnl|danRer3|chr5 (3557359-3557209) | |
| 426-558, gnl|dasNov1|scaffold_51538 (10363-10491) | |
| 426-558, gnl|echTel1|scaffold_279930 (8608-8451) | |
| 426-558, gnl|fr1|chrUn (129151711-129151867) | |
| 426-558, gnl|galGal2|chr15 (509031-508881) | |
| 426-558, gnl|hg17|chr22 (20467097-20467254) | |
| 426-558, gnl|Hg17|chr22 (20467232-20467100) | |
| 426-558, gnl|loxAfr1|scaffold_11360 (24254-24411) | |
| 426-558, gnl|mm7|chr16 (16576226-16576070) | |
| 426-558, gnl|Mm7|chr16 (16576089-16576221) | |
| 426-558, gnl|monDom2|scaffold_214 (790502-790349) | |
| 426-558, gnl|oryCun1|scaffold_169844 (1632-1471) | |
| 426-558, gnl|panTro1|chr23 (20495560-20495717) | |
| 426-558, gnl|rheMac2|chr10 (65546372-65546529) | |
| 426-558, gnl|rn3|chr11 (86026121-86026277) | |
| 426-558, gnl|tetNig1|chr12 (3777481-3777636) | |
| 426-558, gnl|xenTro1|scaffold_118 (220144-219985) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-197, gnl|bosTau2|chr17 (45548140-45547945) | |
| 1-197, gnl|canFam2|chr26 (34117038-34117274) | |
| 1-197, gnl|danRer3|chr5 (3547401-3547179) | |
| 1-197, gnl|dasNov1|scaffold_114726 (3825-4061) | |
| 1-197, gnl|echTel1|scaffold_55628 (5294-5058) | |
| 1-197, gnl|fr1|chrUn (129153407-129153618) | |
| 1-197, gnl|galGal2|chr15 (503579-503342) | |
| 1-197, gnl|hg17|chr22 (20484671-20484907) | |
| 1-197, gnl|Hg17|chr22 (20484885-20484690) | |
| 1-197, gnl|loxAfr1|scaffold_11360 (41002-41238) | |
| 1-197, gnl|mm7|chr16 (16568231-16567993) | |
| 1-197, gnl|Mm7|chr16 (16568015-16568210) | |
| 1-197, gnl|monDom2|scaffold_214 (779165-778944) | |
| 1-197, gnl|oryCun1|scaffold_124602 (1711-1501) | |
| 1-197, gnl|panTro1|chr23 (20512678-20512914) | |
| 1-197, gnl|rheMac2|chr10 (65562868-65563103) | |
| 1-197, gnl|tetNig1|chr12 (3778597-3778808) | |
| 1-197, gnl|xenTro1|scaffold_118 (215575-215357) | |
| 426-558, gnl|bosTau2|chr17 (45538283-45538151) | |
| 426-558, gnl|canFam2|chr26 (34102031-34102188) | |
| 426-558, gnl|danRer3|chr5 (3557359-3557209) | |
| 426-558, gnl|dasNov1|scaffold_51538 (10363-10491) | |
| 426-558, gnl|echTel1|scaffold_279930 (8608-8451) | |
| 426-558, gnl|fr1|chrUn (129151711-129151867) | |
| 426-558, gnl|galGal2|chr15 (509031-508881) | |
| 426-558, gnl|hg17|chr22 (20467097-20467254) | |
| 426-558, gnl|Hg17|chr22 (20467232-20467100) | |
| 426-558, gnl|loxAfr1|scaffold_11360 (24254-24411) | |
| 426-558, gnl|mm7|chr16 (16576226-16576070) | |
| 426-558, gnl|Mm7|chr16 (16576089-16576221) | |
| 426-558, gnl|monDom2|scaffold_214 (790502-790349) | |
| 426-558, gnl|oryCun1|scaffold_169844 (1632-1471) | |
| 426-558, gnl|panTro1|chr23 (20495560-20495717) | |
| 426-558, gnl|rheMac2|chr10 (65546372-65546529) | |
| 426-558, gnl|rn3|chr11 (86026121-86026277) | |
| 426-558, gnl|tetNig1|chr12 (3777481-3777636) | |
| 426-558, gnl|xenTro1|scaffold_118 (220144-219985) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.207814) | |
| jca (0.11396) |