Non-Coding RNA Search

Ss1.1-Ova1-OVRM10195C06.5

Sequence:


               
               CGCCCAGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGGGTCCTGCGTGCAAGAG
TGGCACCCGACGCGGAAACCGCGAGCGGAGGCTCTGCGCAGCCGGACCCGTAGCTTACCG
ACCGGACCTGGGGATCTTCCCGGGAACAAGCGGCAGAAGAGCGATTCGGGAACAAGTGTG
GGAGAGGAAGCGGCGGCGGCGACGCCGGGCCCCGGGGTGGTGACAGCAGGTCTGAGGTGG
ACCATAAATACAAAAGACTGAAGTTATAAAAAGAGAAAAAAAATTGCTGCTAAAATGAAT
CTGAGCAATACAGTATATTTTGCGCCATACACAAAAAGGTACTGAAATTTTACCCCCCAA
AAATAATTGTCAATGAGAGAGAAGGCTGACTGGGATATCAAAAGCAAAACTCTTGTACAT
ACTGGTCATCATGCGGAAAGGAGTGCCAAAAGACCCGGAGACTGCTGACCTGTTTTACAA
AGATGATCCTGAAGAACTTTTTATTGGTTTGCATGAAATCGGACATGGAAGTTTTGGAGC
AGTTTATTTTGCCACAAATGCTCACACCAATGAGGTGGTGGCAGTTAAGAAAATGTCCTA
TAGTGGATAGCAGGCACATGAGAAATGGCAAGATATTCTTAAGGAAGTCAAATTTTTACG
ACAACTGAAGCATCCCAATACCATTGAAATACAAGGTTGTTACTTGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCCCAGGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGGGTCCTGCGTGCAAGAG
TGGCACCCGACGCGGAAACCGCGAGCGGAGGCTCTGCGCAGCCGGACCCGTAGCTTACCG
ACCGGACCTGGGGATCTTCCCGGGAACAAGCGGCAGAAGAGCGATTCGGGAACAAGTGTG
GGAGAGGAAGCGGCGGCGGCGACGCCGGGCCCCGGGGTGGTGACAGCAGGTCTGAGGTGG
ACCATAAATACAAAAGACTGAAGTTATAAAAAGAGAAAAAAAATTGCTGCTAAAATGAAT
CTGAGCAATACAGTATATTTTGCGCCATACACAAAAAGGTACTGAAATTTTACCCCCCAA
AAATAATTGTCAATGAGAGAGAAGGCTGACTGGGATATCAAAAGCAAAACTCTTGTACAT
ACTGGTCATCATGCGGAAAGGAGTGCCAAAAGACCCGGAGACTGCTGACCTGTTTTACAA
AGATGATCCTGAAGAACTTTTTATTGGTTTGCATGAAATCGGACATGGAAGTTTTGGAGC
AGTTTATTTTGCCACAAATGCTCACACCAATGAGGTGGTGGCAGTTAAGAAAATGTCCTA
TAGTGGATAGCAGGCACATGAGAAATGGCAAGATATTCTTAAGGAAGTCAAATTTTTACG
ACAACTGAAGCATCCCAATACCATTGAAATACAAGGTTGTTACTTGAA

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               28-239, gnl|bosTau2|chr17 (31873131-31872922)
               

               
               28-239, gnl|Hg17|chr12 (117273373-117273170)
               


               
               337-551, gnl|bosTau2|chr17 (32028955-32029175)
               

               
               337-551, gnl|Hg17|chr12 (117156182-117155972)
               

               
               337-551, gnl|Mm7|chr5 (116423326-116423539)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               28-239, gnl|bosTau2|chr17 (31873131-31872922)
               

               
               28-239, gnl|Hg17|chr12 (117273373-117273170)
               


               
               337-551, gnl|bosTau2|chr17 (32028955-32029175)
               

               
               337-551, gnl|Hg17|chr12 (117156182-117155972)
               

               
               337-551, gnl|Mm7|chr5 (116423326-116423539)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               clu (0.119646)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	28-239, gnl\|bosTau2\|chr17 (31873131-31872922)
	28-239, gnl\|Hg17\|chr12 (117273373-117273170)

	337-551, gnl\|bosTau2\|chr17 (32028955-32029175)
	337-551, gnl\|Hg17\|chr12 (117156182-117155972)
	337-551, gnl\|Mm7\|chr5 (116423326-116423539)