Ss1.1-Ova1-OVRM10197E02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTAGCCAACGTTTGGGCTCGCTGGCGGGCGCCGCATCTCTGCGTTCCGCAGTCCTCCTCG CAGTACAGATTTCACGGGCGCTCCTGGACCCTCCCCTGCCCTGAACCTGAGCCAGCACCA TGCACGGGCGCCTGAAGGTGAAGACATCAGAAGAGCAAGCAGAAGCCAAAAGGCTAGAGC GGGAACAGAAGCTGAAGCTATACCAGACAGCCACCCAGACCGTCTTCCAGAAGCGTCAGG CTGGAGAGCTGGATGAGTCAGTGCTGGAACTGACAAGCCAGATTCTGGGAGCCAACCCTG ACTTTGCCACACTCTGGAACTGTCGACGGGAGGTGCTTCAGCGGCTGGAGGTCCAGAAGT CCCCGGAAGAGTTGGCCGCTTTGGTGAAGGCAGAACTGGGCTTCCTGGAGAGCTGTCTGA GGGTGAACCCCAAGTCTTATGGTACCTGGCACCACCGCTGCTGGTTGCTGGGTCGCCTGC CAGAGCCCAACTGGGCCCGGGAGCTGGAGTTGTGTGCCCGCTTCCTCGAGGTTGATGAGC GGAACTTTCACTGCTGGGACTACCGGCGGTTTGTGGCCTCCCAGGCAGCTGTCCCCCCCG CGGAGGAGCTAGCCTTCACGGACAGCCTCATCACCCGAAACTTCTCCAACTACTCCTCCT GGCATTACCGCTCCTGCCTCTTGCCCCAGTTGCACCCCCAGCCAGACTCTGGACCCCAGG GGCGCCTCCCTGAGGATGTGCTGCTCAAAGAGCTGGAGCTGGTGCAGAACGCCTTCTTCA CTGACCCCAACGATCAGAGTGCCTGGTTCTACCATCGCTGGCTCCTGGGACGAGCTGATC CCCAGGATGCCCTGCGCTGCCTGCACGTGAGCCGGGATGAGGCCTGTCTGACTGTCTCCT TCTCCCGGCCCCTCCTAGTGGGCCCCAGCACGGAGACCTTGCTGCTCATGGTTAATGAGT CACCCCTGTCCGTGGAGTGGAGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTAGCCAACGTTTGGGCTCGCTGGCGGGCGCCGCATCTCTGCGTTCCGCAGTCCTCCTCG CAGTACAGATTTCACGGGCGCTCCTGGACCCTCCCCTGCCCTGAACCTGAGCCAGCACCA TGCACGGGCGCCTGAAGGTGAAGACATCAGAAGAGCAAGCAGAAGCCAAAAGGCTAGAGC GGGAACAGAAGCTGAAGCTATACCAGACAGCCACCCAGACCGTCTTCCAGAAGCGTCAGG CTGGAGAGCTGGATGAGTCAGTGCTGGAACTGACAAGCCAGATTCTGGGAGCCAACCCTG ACTTTGCCACACTCTGGAACTGTCGACGGGAGGTGCTTCAGCGGCTGGAGGTCCAGAAGT CCCCGGAAGAGTTGGCCGCTTTGGTGAAGGCAGAACTGGGCTTCCTGGAGAGCTGTCTGA GGGTGAACCCCAAGTCTTATGGTACCTGGCACCACCGCTGCTGGTTGCTGGGTCGCCTGC CAGAGCCCAACTGGGCCCGGGAGCTGGAGTTGTGTGCCCGCTTCCTCGAGGTTGATGAGC GGAACTTTCACTGCTGGGACTACCGGCGGTTTGTGGCCTCCCAGGCAGCTGTCCCCCCCG CGGAGGAGCTAGCCTTCACGGACAGCCTCATCACCCGAAACTTCTCCAACTACTCCTCCT GGCATTACCGCTCCTGCCTCTTGCCCCAGTTGCACCCCCAGCCAGACTCTGGACCCCAGG GGCGCCTCCCTGAGGATGTGCTGCTCAAAGAGCTGGAGCTGGTGCAGAACGCCTTCTTCA CTGACCCCAACGATCAGAGTGCCTGGTTCTACCATCGCTGGCTCCTGGGACGAGCTGATC CCCAGGATGCCCTGCGCTGCCTGCACGTGAGCCGGGATGAGGCCTGTCTGACTGTCTCCT TCTCCCGGCCCCTCCTAGTGGGCCCCAGCACGGAGACCTTGCTGCTCATGGTTAATGAGT CACCCCTGTCCGTGGAGTGGAGGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 112-233, gnl|bosTau2|chr10 (12224876-12224998) | |
| 112-233, gnl|Hg17|chr14 (23810005-23809883) | |
| 112-233, gnl|Mm7|chr14 (50589071-50588948) | |
| 354-546, gnl|bosTau2|chr10 (12225678-12225870) | |
| 354-546, gnl|canFam2|chr8 (7254938-7255096) | |
| 354-546, gnl|danRer3|chr25 (10439002-10439160) | |
| 354-546, gnl|dasNov1|scaffold_124867 (162-4) | |
| 354-546, gnl|fr1|chrUn (154313406-154313564) | |
| 354-546, gnl|hg17|chr14 (23808991-23809149) | |
| 354-546, gnl|Hg17|chr14 (23809191-23808999) | |
| 354-546, gnl|mm7|chr14 (50588121-50588279) | |
| 354-546, gnl|Mm7|chr14 (50588321-50588129) | |
| 354-546, gnl|monDom2|scaffold_12 (25454986-25454831) | |
| 354-546, gnl|oryCun1|scaffold_178102 (153286-153444) | |
| 354-546, gnl|panTro1|chr15 (22711827-22711985) | |
| 354-546, gnl|rheMac2|chr7 (87165212-87165370) | |
| 354-546, gnl|rn3|chr15 (33882883-33883041) | |
| 354-546, gnl|tetNig1|chr1_random (2273337-2273495) | |
| 354-546, gnl|xenTro1|scaffold_53 (819917-820074) | |
| 547-750, gnl|bosTau2|chr10 (12226128-12226331) | |
| 547-750, gnl|Hg17|chr14 (23808740-23808537) | |
| 547-750, gnl|Mm7|chr14 (50587860-50587657) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 112-233, gnl|bosTau2|chr10 (12224876-12224998) | |
| 112-233, gnl|Hg17|chr14 (23810005-23809883) | |
| 112-233, gnl|Mm7|chr14 (50589071-50588948) | |
| 354-546, gnl|bosTau2|chr10 (12225678-12225870) | |
| 354-546, gnl|canFam2|chr8 (7254938-7255096) | |
| 354-546, gnl|danRer3|chr25 (10439002-10439160) | |
| 354-546, gnl|dasNov1|scaffold_124867 (162-4) | |
| 354-546, gnl|fr1|chrUn (154313406-154313564) | |
| 354-546, gnl|hg17|chr14 (23808991-23809149) | |
| 354-546, gnl|Hg17|chr14 (23809191-23808999) | |
| 354-546, gnl|mm7|chr14 (50588121-50588279) | |
| 354-546, gnl|Mm7|chr14 (50588321-50588129) | |
| 354-546, gnl|monDom2|scaffold_12 (25454986-25454831) | |
| 354-546, gnl|oryCun1|scaffold_178102 (153286-153444) | |
| 354-546, gnl|panTro1|chr15 (22711827-22711985) | |
| 354-546, gnl|rheMac2|chr7 (87165212-87165370) | |
| 354-546, gnl|rn3|chr15 (33882883-33883041) | |
| 354-546, gnl|tetNig1|chr1_random (2273337-2273495) | |
| 354-546, gnl|xenTro1|scaffold_53 (819917-820074) | |
| 547-750, gnl|bosTau2|chr10 (12226128-12226331) | |
| 547-750, gnl|Hg17|chr14 (23808740-23808537) | |
| 547-750, gnl|Mm7|chr14 (50587860-50587657) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mas (0.210305) | |
| eje (0.0988338) |