Non-Coding RNA Search

Ss1.1-Ova1-OVRM10201D08.5

Sequence:


               
               TTTAAAGTATTCAAGTCAGGGGCTACCTGAATTTAATGTTTTGGGTTTTTTTGTTTGTTT
GTTTGTTTGTTTGTTTTACTAGAAATACTTAGGTTGGTCCTTAATTTATGGCCATTTAGC
GGGTGATTCTAGGAATGGTCCTCACAGTGAACTAAGCTGCTTACTTCCCTCCCACTGAAT
TAATTCCCTGCAGATTGGCACCTCAAATGGGGTTTGCCCTCACTTATTTCTGGAAAGTTT
GGTTAAAATTATGGTTAAAAAAATAGTTTTTTCTCTCCATGACATGTAAGACCTAATGTA
TTTATTTTCTACAGCATTTCTCTGTCTCTAGCTGTCTTTTTGCATTCTGATTGGGAACAC
TGGGATCACTTTCATCATGCCAACAGTGGTGGTAATGGACGTATCCCTTTCCATGACCCG
ACCTGTGTCTGTCGAGGGGTCTGAGGAATATCAGCGCAAGCATCTGGCAGCCCATGGTTT
GACAATGCTATTTGAGCACATGGCCACGAATTACAAGCTCGAGTTTACCGCTCTTGTGGT
TTTTTCATCACTCTGGGAGTTGATGGTTCCCTTCACAAGAGATTATAACACCCTACAGGT
ACAGAAAGAAAAGAGTTATTGTATGTACTGGGCCCAAATTTATAAGAAGAAAAAAAGTGT
TATTAGATGGCATTGAATATTTAGAGCTTGAAATTATTTAATGCTAAGTCTCTGGGTACA
ATATCCGAGTATAACTATAAAACAAGGATTCACAACCAGTAGGCCTTATCTTTTAGCAAA
ACAGTGAGTTAGGGCCATGAGTTGTTGCCACGGTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAAAGTATTCAAGTCAGGGGCTACCTGAATTTAATGTTTTGGGTTTTTTTGTTTGTTT
GTTTGTTTGTTTGTTTTACTAGAAATACTTAGGTTGGTCCTTAATTTATGGCCATTTAGC
GGGTGATTCTAGGAATGGTCCTCACAGTGAACTAAGCTGCTTACTTCCCTCCCACTGAAT
TAATTCCCTGCAGATTGGCACCTCAAATGGGGTTTGCCCTCACTTATTTCTGGAAAGTTT
GGTTAAAATTATGGTTAAAAAAATAGTTTTTTCTCTCCATGACATGTAAGACCTAATGTA
TTTATTTTCTACAGCATTTCTCTGTCTCTAGCTGTCTTTTTGCATTCTGATTGGGAACAC
TGGGATCACTTTCATCATGCCAACAGTGGTGGTAATGGACGTATCCCTTTCCATGACCCG
ACCTGTGTCTGTCGAGGGGTCTGAGGAATATCAGCGCAAGCATCTGGCAGCCCATGGTTT
GACAATGCTATTTGAGCACATGGCCACGAATTACAAGCTCGAGTTTACCGCTCTTGTGGT
TTTTTCATCACTCTGGGAGTTGATGGTTCCCTTCACAAGAGATTATAACACCCTACAGGT
ACAGAAAGAAAAGAGTTATTGTATGTACTGGGCCCAAATTTATAAGAAGAAAAAAAGTGT
TATTAGATGGCATTGAATATTTAGAGCTTGAAATTATTTAATGCTAAGTCTCTGGGTACA
ATATCCGAGTATAACTATAAAACAAGGATTCACAACCAGTAGGCCTTATCTTTTAGCAAA
ACAGTGAGTTAGGGCCATGAGTTGTTGCCACGGTCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               252-815, gnl|bosTau2|chr10 (9093138-9092585)
               

               
               252-815, gnl|Hg17|chr15 (63686873-63686330)
               

               
               252-815, gnl|Mm7|chr9 (64993912-64994449)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               252-815, gnl|bosTau2|chr10 (9093138-9092585)
               

               
               252-815, gnl|Hg17|chr15 (63686873-63686330)
               

               
               252-815, gnl|Mm7|chr9 (64993912-64994449)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lyg (0.133103)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lyg (0.133103)

	252-815, gnl\|bosTau2\|chr10 (9093138-9092585)
	252-815, gnl\|Hg17\|chr15 (63686873-63686330)
	252-815, gnl\|Mm7\|chr9 (64993912-64994449)