Non-Coding RNA Search

Ss1.1-Ova1-OVRM10215D10.5

Sequence:


               
               AGACATTTTGTCTGCCTGGGGTCGACCCGTCTTAGCAGCACCTCCGGGGCTGTGATTAGC
TCCAGAGGTGACGGGAAGCGGGAAGGCGCAGCAGCCAACCGTTTTTCCGCTGTAGAGAGG
CTCGATGGTGGCAACGCCCGCGAGAATTCCACCGCCGGAGCCGAGCGACGGCAGTGTCCA
GTTCCCGACCTGGGACCTCACGACTCGGTGTGGTCCGGTTGTGATGGCGGCCGCCTGGGC
GACGGACCCCCGTAGGTTGTTGGCATGGAGTGGAGAATGAAGAGGCAACTTCTGAGCAGA
GTGTTTCTGTAGGAGTGTTACATGTTCGTACTTCCAAGGTAGATTCATTGACTCAGGTGA
CTTACACTTGTGACTTATGTGGTCCCATTTTGAAAGATATTTTACACCTGGATGAACACC
AAGAAACATGCCATGGAGTGAAATCTTACACATGTGGGGCATGTGGGAGACAATTCTGGT
TCAGTGCAAACTTTGACCAGCATCAGAAGCCATACATTATGGAGAAACTCTTAAGAGAAG
ACAAAAGCAAGACCTCTTTTGTGAAGAACTGTAGAGTTTGTCAGGAACCTCACCTGTTAG
AAGCTCTTTGCCTGTAAGGAGGAGCAGAAGGACTTTCAGGACAGTTTGGGCAGTCACCAG
CAAAAGGCCACCCACAGCAAGAGGAAGACAAGGAGCACTGAGAGTGGGGAGACCTTTCAT
ATTGGACAAATGGATTACAAATGCAGTGAATGTGGGAAAACTTTCAGCCGCAAAGACACA
CTTGTCCAGCACCAGAGAATCCATACTGGAGAAAGGCCTTATGAGTGC------------
GAAAGCCTTCAGCCGCAAAGCCACACTCATCCAACACCAGAGAATCCATACAGGAGAAAG
GCCTTATGAGTGTAGTGAATGTGGGAAAGCCTTTAGCCGCAAAGACAACCTTACCCAGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGACATTTTGTCTGCCTGGGGTCGACCCGTCTTAGCAGCACCTCCGGGGCTGTGATTAGC
TCCAGAGGTGACGGGAAGCGGGAAGGCGCAGCAGCCAACCGTTTTTCCGCTGTAGAGAGG
CTCGATGGTGGCAACGCCCGCGAGAATTCCACCGCCGGAGCCGAGCGACGGCAGTGTCCA
GTTCCCGACCTGGGACCTCACGACTCGGTGTGGTCCGGTTGTGATGGCGGCCGCCTGGGC
GACGGACCCCCGTAGGTTGTTGGCATGGAGTGGAGAATGAAGAGGCAACTTCTGAGCAGA
GTGTTTCTGTAGGAGTGTTACATGTTCGTACTTCCAAGGTAGATTCATTGACTCAGGTGA
CTTACACTTGTGACTTATGTGGTCCCATTTTGAAAGATATTTTACACCTGGATGAACACC
AAGAAACATGCCATGGAGTGAAATCTTACACATGTGGGGCATGTGGGAGACAATTCTGGT
TCAGTGCAAACTTTGACCAGCATCAGAAGCCATACATTATGGAGAAACTCTTAAGAGAAG
ACAAAAGCAAGACCTCTTTTGTGAAGAACTGTAGAGTTTGTCAGGAACCTCACCTGTTAG
AAGCTCTTTGCCTGTAAGGAGGAGCAGAAGGACTTTCAGGACAGTTTGGGCAGTCACCAG
CAAAAGGCCACCCACAGCAAGAGGAAGACAAGGAGCACTGAGAGTGGGGAGACCTTTCAT
ATTGGACAAATGGATTACAAATGCAGTGAATGTGGGAAAACTTTCAGCCGCAAAGACACA
CTTGTCCAGCACCAGAGAATCCATACTGGAGAAAGGCCTTATGAGTGC------------
GAAAGCCTTCAGCCGCAAAGCCACACTCATCCAACACCAGAGAATCCATACAGGAGAAAG
GCCTTATGAGTGTAGTGAATGTGGGAAAGCCTTTAGCCGCAAAGACAACCTTACCCAGCA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q6PJU4_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q6PJU4_HUMAN

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               254-931, gnl|bosTau2|chr18 (54978848-54979526)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               254-931, gnl|bosTau2|chr18 (54978848-54979526)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)