Ss1.1-Ova1-OVRM10216C11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATAAAGAATGTTGAAGATAAATCATGGAAAAAAATACGTCCAAGACCAACAAAAACAAA TTATGAAGGACCTTATTATATATGTAAAGATGTTGCTGCCGAGGAGGAATGTAGATATTC AGGCCACTGCACATTTGCTTATTGCCAAGAAGAGATAGACGTCTGGACCCTGGAGCGAAA GGGGGCGTTTAGTAGGGAGGCTTTCTTTGGCGGCAATGGAAAGATCCACCTTACCGTATT CAAACTTCTCCAAGAGCATCTTGGAGAATTTATATTCCTGTGTGAGAAATGTTTTGATCA TAAGCCTAGAATGATAAGTAAAAGAAACAAAGATAATTCTACTTCTTGTTCTCATCCTGT TACAAAGCACGAGTTTGAAGACAATAAGTGCCTTGTCCACATTTTGCGAGAGACAACAGT AAAATACTCCAAAATCCGCTCTTTTCATGGCCAGTGTCAGCTTGACCTATGCCGACACGA GGTTCGCTATGGCTGTCTGCGGGAAGACGAGTGCTTTTATGCACATAGCCTCGTGGAATT GAAAGTCTGGATGTTGCAGAGTGAAACAGGAATCTCACATGACGCTATTGCCGAGGAATC TAAACGCTATTGGCAAAACTTGGAAGCAAATGTACCTGGAGCACAGGTACTTGGCGATCA AATAATGCCTGGATCTCTTAATATGAAGATAAAATTTGTATGTGCTCAGTGTCTGAGAAA TGGTCAAGTCATTGAACCAGACAAAAACAGAAAATATTGTAGTGCAAAAGCAAGGCATTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATAAAGAATGTTGAAGATAAATCATGGAAAAAAATACGTCCAAGACCAACAAAAACAAA TTATGAAGGACCTTATTATATATGTAAAGATGTTGCTGCCGAGGAGGAATGTAGATATTC AGGCCACTGCACATTTGCTTATTGCCAAGAAGAGATAGACGTCTGGACCCTGGAGCGAAA GGGGGCGTTTAGTAGGGAGGCTTTCTTTGGCGGCAATGGAAAGATCCACCTTACCGTATT CAAACTTCTCCAAGAGCATCTTGGAGAATTTATATTCCTGTGTGAGAAATGTTTTGATCA TAAGCCTAGAATGATAAGTAAAAGAAACAAAGATAATTCTACTTCTTGTTCTCATCCTGT TACAAAGCACGAGTTTGAAGACAATAAGTGCCTTGTCCACATTTTGCGAGAGACAACAGT AAAATACTCCAAAATCCGCTCTTTTCATGGCCAGTGTCAGCTTGACCTATGCCGACACGA GGTTCGCTATGGCTGTCTGCGGGAAGACGAGTGCTTTTATGCACATAGCCTCGTGGAATT GAAAGTCTGGATGTTGCAGAGTGAAACAGGAATCTCACATGACGCTATTGCCGAGGAATC TAAACGCTATTGGCAAAACTTGGAAGCAAATGTACCTGGAGCACAGGTACTTGGCGATCA AATAATGCCTGGATCTCTTAATATGAAGATAAAATTTGTATGTGCTCAGTGTCTGAGAAA TGGTCAAGTCATTGAACCAGACAAAAACAGAAAATATTGTAGTGCAAAAGCAAGGCATTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 88-286, gnl|bosTau2|chr25 (9769364-9769166) | |
| 88-286, gnl|Hg17|chr16 (11767044-11766846) | |
| 88-286, gnl|Mm7|chr16 (10828611-10828413) | |
| 385-570, gnl|bosTau2|chr25 (9768147-9767962) | |
| 385-570, gnl|canFam2|chr6 (34097474-34097285) | |
| 385-570, gnl|danRer3|chr3 (39532206-39532017) | |
| 385-570, gnl|dasNov1|scaffold_15822 (48724-48913) | |
| 385-570, gnl|echTel1|scaffold_315585 (128152-128341) | |
| 385-570, gnl|fr1|chrUn (105388446-105388257) | |
| 385-570, gnl|galGal2|chr14 (3085572-3085383) | |
| 385-570, gnl|hg17|chr16 (11764831-11765020) | |
| 385-570, gnl|Hg17|chr16 (11765019-11764834) | |
| 385-570, gnl|loxAfr1|scaffold_15072 (32889-33078) | |
| 385-570, gnl|mm7|chr16 (10826467-10826656) | |
| 385-570, gnl|Mm7|chr16 (10826655-10826470) | |
| 385-570, gnl|monDom2|scaffold_17 (32524860-32524674) | |
| 385-570, gnl|oryCun1|scaffold_199732 (44476-44665) | |
| 385-570, gnl|panTro1|chr18 (12095215-12095404) | |
| 385-570, gnl|rheMac2|chr20 (11836473-11836662) | |
| 385-570, gnl|rn3|chr10 (4391023-4390782) | |
| 385-570, gnl|tetNig1|chr3 (12012680-12012868) | |
| 385-570, gnl|xenTro1|scaffold_859 (73661-73472) | |
| 645-780, gnl|bosTau2|chr25 (9766551-9766416) | |
| 645-780, gnl|canFam2|chr6 (34099185-34099042) | |
| 645-780, gnl|danRer3|chr3 (39535984-39535863) | |
| 645-780, gnl|echTel1|scaffold_315585 (125882-126027) | |
| 645-780, gnl|fr1|chrUn (105388815-105388674) | |
| 645-780, gnl|galGal2|chr14 (3088273-3088130) | |
| 645-780, gnl|hg17|chr16 (11763260-11763403) | |
| 645-780, gnl|Hg17|chr16 (11763402-11763267) | |
| 645-780, gnl|loxAfr1|scaffold_15072 (31378-31521) | |
| 645-780, gnl|mm7|chr16 (10824842-10824984) | |
| 645-780, gnl|Mm7|chr16 (10824983-10824848) | |
| 645-780, gnl|monDom2|scaffold_17 (32526572-32526429) | |
| 645-780, gnl|panTro1|chr18 (12093645-12093788) | |
| 645-780, gnl|rheMac2|chr20 (11834866-11835009) | |
| 645-780, gnl|rn3|chr10 (4392775-4392632) | |
| 645-780, gnl|tetNig1|chr3 (12012312-12012426) | |
| 645-780, gnl|xenTro1|scaffold_859 (79701-79559) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 88-286, gnl|bosTau2|chr25 (9769364-9769166) | |
| 88-286, gnl|Hg17|chr16 (11767044-11766846) | |
| 88-286, gnl|Mm7|chr16 (10828611-10828413) | |
| 385-570, gnl|bosTau2|chr25 (9768147-9767962) | |
| 385-570, gnl|canFam2|chr6 (34097474-34097285) | |
| 385-570, gnl|danRer3|chr3 (39532206-39532017) | |
| 385-570, gnl|dasNov1|scaffold_15822 (48724-48913) | |
| 385-570, gnl|echTel1|scaffold_315585 (128152-128341) | |
| 385-570, gnl|fr1|chrUn (105388446-105388257) | |
| 385-570, gnl|galGal2|chr14 (3085572-3085383) | |
| 385-570, gnl|hg17|chr16 (11764831-11765020) | |
| 385-570, gnl|Hg17|chr16 (11765019-11764834) | |
| 385-570, gnl|loxAfr1|scaffold_15072 (32889-33078) | |
| 385-570, gnl|mm7|chr16 (10826467-10826656) | |
| 385-570, gnl|Mm7|chr16 (10826655-10826470) | |
| 385-570, gnl|monDom2|scaffold_17 (32524860-32524674) | |
| 385-570, gnl|oryCun1|scaffold_199732 (44476-44665) | |
| 385-570, gnl|panTro1|chr18 (12095215-12095404) | |
| 385-570, gnl|rheMac2|chr20 (11836473-11836662) | |
| 385-570, gnl|rn3|chr10 (4391023-4390782) | |
| 385-570, gnl|tetNig1|chr3 (12012680-12012868) | |
| 385-570, gnl|xenTro1|scaffold_859 (73661-73472) | |
| 645-780, gnl|bosTau2|chr25 (9766551-9766416) | |
| 645-780, gnl|canFam2|chr6 (34099185-34099042) | |
| 645-780, gnl|danRer3|chr3 (39535984-39535863) | |
| 645-780, gnl|echTel1|scaffold_315585 (125882-126027) | |
| 645-780, gnl|fr1|chrUn (105388815-105388674) | |
| 645-780, gnl|galGal2|chr14 (3088273-3088130) | |
| 645-780, gnl|hg17|chr16 (11763260-11763403) | |
| 645-780, gnl|Hg17|chr16 (11763402-11763267) | |
| 645-780, gnl|loxAfr1|scaffold_15072 (31378-31521) | |
| 645-780, gnl|mm7|chr16 (10824842-10824984) | |
| 645-780, gnl|Mm7|chr16 (10824983-10824848) | |
| 645-780, gnl|monDom2|scaffold_17 (32526572-32526429) | |
| 645-780, gnl|panTro1|chr18 (12093645-12093788) | |
| 645-780, gnl|rheMac2|chr20 (11834866-11835009) | |
| 645-780, gnl|rn3|chr10 (4392775-4392632) | |
| 645-780, gnl|tetNig1|chr3 (12012312-12012426) | |
| 645-780, gnl|xenTro1|scaffold_859 (79701-79559) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| elu (0.385356) | |
| cty (0.31224) | |
| eru (0.120048) | |
| cbl (0.114797) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| elu (0.385356) | |
| cty (0.31224) | |
| eru (0.120048) | |
| cbl (0.114797) |