Ss1.1-Ova1-OVRM10218A01.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGACCGCGGGCGGGGTGGGGGGAACCGGTGCTGAGAGCCTGGCGGGCGGCGATCGCAGC CACCGCGCTGGAGGCCGCGAAGATTGAGTGCCCGGGATGAGCCTCACCCGGAAAAGGGGT TTCTACAAGCAGGACGTCAACAAGACCGCCTGGGAGCTGCCCAAGACCTACGTGTCCCTG ACGAACGTAGGCAGCGGGGCCTACGGTGCAGTGTGCTCAGCCATTGACAAGCGGTCGGGG GAGAAGGTGGCCATCAAGAAGCTGAGCCGGCCCTTCCAGTCTGAGATCTTTGCCAAGCGC GCCTACCGGGAGCTGATGCTGCTGAAACACATGCAGCATGAGAACGTCATCGGGCTCCTG GATGTCTTCACCCCAGCCTCTTCCCTGCGTAACTTCCACGACTTCTACCTGGTGATGCCC TTCATGCAGACAGACCTGCAGAAGATCATGGGGATGGAGTTCAGTGAGGACAAGATCCAG TACCTGGTGTATCAGATGCTCAAGGGTCTAAAGTACATCCACTCCGCTGGGGTGGTCCAC AGGGACCTGAAGCCAGGCAACCTCGCTGTGAATGAGGACTGCGAGCTGAAGATCTTGGAT TTTGGGCTGGCTCGGCCTGCAGATGCAGAGATGACTGGCTACGTGGTGACCCGCTGGTAC CGGGCCCCTGAGGTGATCCTCAGCTGGATGCACTACAACCAGACTGTGGACATCTGGTCT GTGGGCTGTATCATGGCAGAGATGCTAACTGGGAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGACCGCGGGCGGGGTGGGGGGAACCGGTGCTGAGAGCCTGGCGGGCGGCGATCGCAGC CACCGCGCTGGAGGCCGCGAAGATTGAGTGCCCGGGATGAGCCTCACCCGGAAAAGGGGT TTCTACAAGCAGGACGTCAACAAGACCGCCTGGGAGCTGCCCAAGACCTACGTGTCCCTG ACGAACGTAGGCAGCGGGGCCTACGGTGCAGTGTGCTCAGCCATTGACAAGCGGTCGGGG GAGAAGGTGGCCATCAAGAAGCTGAGCCGGCCCTTCCAGTCTGAGATCTTTGCCAAGCGC GCCTACCGGGAGCTGATGCTGCTGAAACACATGCAGCATGAGAACGTCATCGGGCTCCTG GATGTCTTCACCCCAGCCTCTTCCCTGCGTAACTTCCACGACTTCTACCTGGTGATGCCC TTCATGCAGACAGACCTGCAGAAGATCATGGGGATGGAGTTCAGTGAGGACAAGATCCAG TACCTGGTGTATCAGATGCTCAAGGGTCTAAAGTACATCCACTCCGCTGGGGTGGTCCAC AGGGACCTGAAGCCAGGCAACCTCGCTGTGAATGAGGACTGCGAGCTGAAGATCTTGGAT TTTGGGCTGGCTCGGCCTGCAGATGCAGAGATGACTGGCTACGTGGTGACCCGCTGGTAC CGGGCCCCTGAGGTGATCCTCAGCTGGATGCACTACAACCAGACTGTGGACATCTGGTCT GTGGGCTGTATCATGGCAGAGATGCTAACTGGGAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-220, gnl|bosTau2|chr23 (8422685-8422905) | |
| 1-220, gnl|Hg17|chr6 (36206250-36206461) | |
| 1-220, gnl|Mm7|chr17 (26955519-26955729) | |
| 405-513, gnl|bosTau2|chr23 (8428025-8428133) | |
| 405-513, gnl|Hg17|chr6 (36211508-36211616) | |
| 405-513, gnl|Mm7|chr17 (26961450-26961558) | |
| 583-706, gnl|bosTau2|chr23 (8428908-8429031) | |
| 583-706, gnl|canFam2|chr12 (8246348-8246449) | |
| 583-706, gnl|danRer3|chr4 (3379736-3379836) | |
| 583-706, gnl|dasNov1|scaffold_41696 (5168-5066) | |
| 583-706, gnl|echTel1|scaffold_307286 (3303-3202) | |
| 583-706, gnl|fr1|chrUn (103410838-103410737) | |
| 583-706, gnl|galGal2|chr32 (880051-879950) | |
| 583-706, gnl|hg17|chr6 (36212402-36212503) | |
| 583-706, gnl|Hg17|chr6 (36212402-36212525) | |
| 583-706, gnl|loxAfr1|scaffold_57381 (1433-1534) | |
| 583-706, gnl|mm7|chr17 (26962489-26962590) | |
| 583-706, gnl|Mm7|chr17 (26962489-26962612) | |
| 583-706, gnl|monDom2|scaffold_42 (10608238-10608137) | |
| 583-706, gnl|oryCun1|scaffold_82138 (2894-2773) | |
| 583-706, gnl|panTro1|chr5 (36676424-36676524) | |
| 583-706, gnl|rheMac2|chr4 (35892657-35892757) | |
| 583-706, gnl|rn3|chr20 (7061809-7061910) | |
| 583-706, gnl|tetNig1|chrUn_random (54998983-54999084) | |
| 583-706, gnl|xenTro1|scaffold_668 (421223-421322) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-220, gnl|bosTau2|chr23 (8422685-8422905) | |
| 1-220, gnl|Hg17|chr6 (36206250-36206461) | |
| 1-220, gnl|Mm7|chr17 (26955519-26955729) | |
| 405-513, gnl|bosTau2|chr23 (8428025-8428133) | |
| 405-513, gnl|Hg17|chr6 (36211508-36211616) | |
| 405-513, gnl|Mm7|chr17 (26961450-26961558) | |
| 583-706, gnl|bosTau2|chr23 (8428908-8429031) | |
| 583-706, gnl|canFam2|chr12 (8246348-8246449) | |
| 583-706, gnl|danRer3|chr4 (3379736-3379836) | |
| 583-706, gnl|dasNov1|scaffold_41696 (5168-5066) | |
| 583-706, gnl|echTel1|scaffold_307286 (3303-3202) | |
| 583-706, gnl|fr1|chrUn (103410838-103410737) | |
| 583-706, gnl|galGal2|chr32 (880051-879950) | |
| 583-706, gnl|hg17|chr6 (36212402-36212503) | |
| 583-706, gnl|Hg17|chr6 (36212402-36212525) | |
| 583-706, gnl|loxAfr1|scaffold_57381 (1433-1534) | |
| 583-706, gnl|mm7|chr17 (26962489-26962590) | |
| 583-706, gnl|Mm7|chr17 (26962489-26962612) | |
| 583-706, gnl|monDom2|scaffold_42 (10608238-10608137) | |
| 583-706, gnl|oryCun1|scaffold_82138 (2894-2773) | |
| 583-706, gnl|panTro1|chr5 (36676424-36676524) | |
| 583-706, gnl|rheMac2|chr4 (35892657-35892757) | |
| 583-706, gnl|rn3|chr20 (7061809-7061910) | |
| 583-706, gnl|tetNig1|chrUn_random (54998983-54999084) | |
| 583-706, gnl|xenTro1|scaffold_668 (421223-421322) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cst (0.280073) | |
| cga (0.279096) |