Non-Coding RNA Search

Ss1.1-Ova1-OVRM10219H12.5

Sequence:


               
               TTGTTTCCCCGAAAGCCAGTCCCGGAGCGGTAGGAGCGGTGGCGTTGGGCTGCAGCCCGG
GGAGGTGGAGCCTTTTTGCTCGCTGCAGCCGGTCCCCCCTCCTCCGCCTCTGTCTCTGCC
GGTCGCCGCGCATCCTGTGCATCGGCTCTTCGTGCTCCGCGTGCAGCTCCGGCTCCGCGG
CGGGGAAGAGGCAGGGTGTGCTCCCAGACCGTGGGGTAAACTGCAGTCGCTCTTTGGGGA
GCCCCGGGAGAACACCTGGAAGGAGGGAGAACACCGGTACCATGGTGCCAGCTCTGCTGC
TTTCCTTTCTCAAGAGAGGAGGAAAAAATCAGTGATAAGAATGGAGGTGAGCCCGATGAT
GCTGAATTGGTAAGGCTCAGTAAGAGGCTGGTGGAGAATGCGGTGCTCAAGGCCGTCCAG
CAGTATCTGGAAGAAACACAGAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGTTTCCCCGAAAGCCAGTCCCGGAGCGGTAGGAGCGGTGGCGTTGGGCTGCAGCCCGG
GGAGGTGGAGCCTTTTTGCTCGCTGCAGCCGGTCCCCCCTCCTCCGCCTCTGTCTCTGCC
GGTCGCCGCGCATCCTGTGCATCGGCTCTTCGTGCTCCGCGTGCAGCTCCGGCTCCGCGG
CGGGGAAGAGGCAGGGTGTGCTCCCAGACCGTGGGGTAAACTGCAGTCGCTCTTTGGGGA
GCCCCGGGAGAACACCTGGAAGGAGGGAGAACACCGGTACCATGGTGCCAGCTCTGCTGC
TTTCCTTTCTCAAGAGAGGAGGAAAAAATCAGTGATAAGAATGGAGGTGAGCCCGATGAT
GCTGAATTGGTAAGGCTCAGTAAGAGGCTGGTGGAGAATGCGGTGCTCAAGGCCGTCCAG
CAGTATCTGGAAGAAACACAGAAC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|56204787|emb|CAI21508.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|56204787|emb|CAI21508.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               172-333, gnl|bosTau2|chr9 (39700730-39700890)
               

               
               172-333, gnl|Hg17|chr6 (131613288-131613451)
               

               
               172-333, gnl|Mm7|chr10 (24952076-24951941)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               172-333, gnl|bosTau2|chr9 (39700730-39700890)
               

               
               172-333, gnl|Hg17|chr6 (131613288-131613451)
               

               
               172-333, gnl|Mm7|chr10 (24952076-24951941)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	172-333, gnl\|bosTau2\|chr9 (39700730-39700890)
	172-333, gnl\|Hg17\|chr6 (131613288-131613451)
	172-333, gnl\|Mm7\|chr10 (24952076-24951941)