Non-Coding RNA Search

Ss1.1-OvaF-UMC-pfeto1-012-g11.3

Sequence:


               
               TGTGGTATAACAGTTCCTAGAAACTAATATGCTTACCAAGCCTGGTTTTTTAATCCCCAC
CAGAATGGGCCTAGAATTGTTTGAGTTCTTACTGCATCAGCTCCTGGAAAGAGGCTGTCA
CACCTTTTTTGAAGGAGGAGCATGAGCTCCAGGTGCCAGGTGAAGGGATGGCCTTTAAGG
CGTGGTGGAAGACACACCCATCTATTTTAGCTTGAGGGGGTAACCCTGTCTTTGTTTTAT
CAAAACTGTAGGAAGAAAGCTTTCTTTTCTGTTGTGGGTGATAACTAGTAGGTAGTGGAG
ATAATTGCAGCCAGTTTTGAATATTTGCATGTAAATGGCTGTACAACAGCCAAATGTTTA
TAATTCAAGCATTATCCATGTTTTAATGATAACCTCTTTCTGTATCATTTCCTTGTTAAG
TTTGCTTTAGGATTTGTCTCTGTCTTAATGACACATAATTAGTTTAAAATCTCTTCCAGG
TGTATCCTGAATGAACACATCTGTTCTGAGCATAAATAAAAAGTAACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTGGTATAACAGTTCCTAGAAACTAATATGCTTACCAAGCCTGGTTTTTTAATCCCCAC
CAGAATGGGCCTAGAATTGTTTGAGTTCTTACTGCATCAGCTCCTGGAAAGAGGCTGTCA
CACCTTTTTTGAAGGAGGAGCATGAGCTCCAGGTGCCAGGTGAAGGGATGGCCTTTAAGG
CGTGGTGGAAGACACACCCATCTATTTTAGCTTGAGGGGGTAACCCTGTCTTTGTTTTAT
CAAAACTGTAGGAAGAAAGCTTTCTTTTCTGTTGTGGGTGATAACTAGTAGGTAGTGGAG
ATAATTGCAGCCAGTTTTGAATATTTGCATGTAAATGGCTGTACAACAGCCAAATGTTTA
TAATTCAAGCATTATCCATGTTTTAATGATAACCTCTTTCTGTATCATTTCCTTGTTAAG
TTTGCTTTAGGATTTGTCTCTGTCTTAATGACACATAATTAGTTTAAAATCTCTTCCAGG
TGTATCCTGAATGAACACATCTGTTCTGAGCATAAATAAAAAGTAACC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               47-504, gnl|bosTau2|chr12 (39703474-39703946)
               

               
               47-504, gnl|Hg17|chr13 (98540525-98541022)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               47-504, gnl|bosTau2|chr12 (39703474-39703946)
               

               
               47-504, gnl|Hg17|chr13 (98540525-98541022)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ski (0.29347)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ski (0.29347)

	47-504, gnl\|bosTau2\|chr12 (39703474-39703946)
	47-504, gnl\|Hg17\|chr13 (98540525-98541022)