Ss1.1-OvaN-UMC-pnatal4-001-a07.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGAGAACGCCGGCGCCCAGCCACCAGCGCAGACCATGGCCCGCTGACTCCAGCGGGAGC GCCGCGCCCGACGGGATGATGCGCTGGAGGGGCCCCTGGCCGTGGCGCGCGCGGCTGCTG ACGACCCCCGGAACCCAAGGCCAAGCGCATTCGCGGCCGCCGATGCCCCAGGTTTTGTGT GTGAAACTGTATGGACATCTGAAATACTATCAGTCAAATTTTTATAGTACAGTGGTGCCA CCTGATGAAATCACAGTTAATTACAGGCATGGTCTTCCCTTGATTACGCTTACTTTGCCA TCCAGAAAAGAGCGCTGTCAATTTGTAGTCAAACCATTGTTATCAACGGTTGGTTCCTTC CTTCAGGACCTGCAAAATGAAGATAAAGGTATCAAAACTGCTGCCATAGTCACACCAGAT GGCAGTGAAGTGGCAGCTTCAACCTTAATGGAAACTTTGCTAATGAATGATTTTAAACTT GTTATTAATGAAATAACATATGAGGTACAGTGCTCCAAGGAAGAAAAACCGAGTAGCGAG CATGCCACTGAGATGGAAAACATGAAATCCTTGGTTCACAGACTGTTCACCACCTTGCAT TCAGGCGAGTTTCAGAAACAGAGAGAGCGCCATCTACTGGAGAAAATTAACCACCTGAAG GGACAGCTGCAGCCCCTTGAACAGATGAAGGCTAAAATCGAAGCACGCTCAGAAGCCAAA TCCATTGGACTCCTGTGGGCTGGATTGGCACTGTTGTCCATTCAGGGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGAGAACGCCGGCGCCCAGCCACCAGCGCAGACCATGGCCCGCTGACTCCAGCGGGAGC GCCGCGCCCGACGGGATGATGCGCTGGAGGGGCCCCTGGCCGTGGCGCGCGCGGCTGCTG ACGACCCCCGGAACCCAAGGCCAAGCGCATTCGCGGCCGCCGATGCCCCAGGTTTTGTGT GTGAAACTGTATGGACATCTGAAATACTATCAGTCAAATTTTTATAGTACAGTGGTGCCA CCTGATGAAATCACAGTTAATTACAGGCATGGTCTTCCCTTGATTACGCTTACTTTGCCA TCCAGAAAAGAGCGCTGTCAATTTGTAGTCAAACCATTGTTATCAACGGTTGGTTCCTTC CTTCAGGACCTGCAAAATGAAGATAAAGGTATCAAAACTGCTGCCATAGTCACACCAGAT GGCAGTGAAGTGGCAGCTTCAACCTTAATGGAAACTTTGCTAATGAATGATTTTAAACTT GTTATTAATGAAATAACATATGAGGTACAGTGCTCCAAGGAAGAAAAACCGAGTAGCGAG CATGCCACTGAGATGGAAAACATGAAATCCTTGGTTCACAGACTGTTCACCACCTTGCAT TCAGGCGAGTTTCAGAAACAGAGAGAGCGCCATCTACTGGAGAAAATTAACCACCTGAAG GGACAGCTGCAGCCCCTTGAACAGATGAAGGCTAAAATCGAAGCACGCTCAGAAGCCAAA TCCATTGGACTCCTGTGGGCTGGATTGGCACTGTTGTCCATTCAGGGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 247-418, gnl|bosTau2|chr27 (4724543-4724714) | |
| 247-418, gnl|canFam2|chr32 (32789949-32790144) | |
| 247-418, gnl|danRer3|chrNA (144283803-144284005) | |
| 247-418, gnl|dasNov1|scaffold_1451 (82462-82658) | |
| 247-418, gnl|echTel1|scaffold_287900 (43983-44178) | |
| 247-418, gnl|fr1|chrUn (244800938-244801134) | |
| 247-418, gnl|galGal2|chr4 (58676793-58676597) | |
| 247-418, gnl|hg17|chr4 (110938935-110939131) | |
| 247-418, gnl|Hg17|chr4 (110938954-110939125) | |
| 247-418, gnl|loxAfr1|scaffold_5422 (9383-9188) | |
| 247-418, gnl|mm7|chr3 (129773135-129772933) | |
| 247-418, gnl|Mm7|chr3 (129773108-129772937) | |
| 247-418, gnl|monDom2|scaffold_9 (85041658-85041462) | |
| 247-418, gnl|oryCun1|scaffold_203538 (31138-31337) | |
| 247-418, gnl|panTro1|chr3 (127437536-127437732) | |
| 247-418, gnl|rheMac2|chr5 (102577937-102578133) | |
| 247-418, gnl|rn3|chrUn (14989267-14989460) | |
| 247-418, gnl|tetNig1|chr17 (3140806-3141002) | |
| 522-684, gnl|bosTau2|chr6 (3546749-3546911) | |
| 522-684, gnl|canFam2|chr32 (32806179-32806388) | |
| 522-684, gnl|dasNov1|scaffold_1451 (92606-92813) | |
| 522-684, gnl|echTel1|scaffold_298467 (28412-28618) | |
| 522-684, gnl|fr1|chrUn (238402279-238402474) | |
| 522-684, gnl|galGal2|chr4 (58672154-58671955) | |
| 522-684, gnl|hg17|chr4 (110961322-110961531) | |
| 522-684, gnl|Hg17|chr4 (110961340-110961502) | |
| 522-684, gnl|mm7|chr3 (129758120-129757914) | |
| 522-684, gnl|Mm7|chr3 (129758102-129757940) | |
| 522-684, gnl|monDom2|scaffold_9 (85034260-85034059) | |
| 522-684, gnl|oryCun1|scaffold_203538 (43929-44136) | |
| 522-684, gnl|panTro1|chr3 (127459624-127459833) | |
| 522-684, gnl|rheMac2|chr5 (102595849-102596058) | |
| 522-684, gnl|rn3|chr2 (227365217-227365011) | |
| 522-684, gnl|xenTro1|scaffold_520 (112876-112698) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 247-418, gnl|bosTau2|chr27 (4724543-4724714) | |
| 247-418, gnl|canFam2|chr32 (32789949-32790144) | |
| 247-418, gnl|danRer3|chrNA (144283803-144284005) | |
| 247-418, gnl|dasNov1|scaffold_1451 (82462-82658) | |
| 247-418, gnl|echTel1|scaffold_287900 (43983-44178) | |
| 247-418, gnl|fr1|chrUn (244800938-244801134) | |
| 247-418, gnl|galGal2|chr4 (58676793-58676597) | |
| 247-418, gnl|hg17|chr4 (110938935-110939131) | |
| 247-418, gnl|Hg17|chr4 (110938954-110939125) | |
| 247-418, gnl|loxAfr1|scaffold_5422 (9383-9188) | |
| 247-418, gnl|mm7|chr3 (129773135-129772933) | |
| 247-418, gnl|Mm7|chr3 (129773108-129772937) | |
| 247-418, gnl|monDom2|scaffold_9 (85041658-85041462) | |
| 247-418, gnl|oryCun1|scaffold_203538 (31138-31337) | |
| 247-418, gnl|panTro1|chr3 (127437536-127437732) | |
| 247-418, gnl|rheMac2|chr5 (102577937-102578133) | |
| 247-418, gnl|rn3|chrUn (14989267-14989460) | |
| 247-418, gnl|tetNig1|chr17 (3140806-3141002) | |
| 522-684, gnl|bosTau2|chr6 (3546749-3546911) | |
| 522-684, gnl|canFam2|chr32 (32806179-32806388) | |
| 522-684, gnl|dasNov1|scaffold_1451 (92606-92813) | |
| 522-684, gnl|echTel1|scaffold_298467 (28412-28618) | |
| 522-684, gnl|fr1|chrUn (238402279-238402474) | |
| 522-684, gnl|galGal2|chr4 (58672154-58671955) | |
| 522-684, gnl|hg17|chr4 (110961322-110961531) | |
| 522-684, gnl|Hg17|chr4 (110961340-110961502) | |
| 522-684, gnl|mm7|chr3 (129758120-129757914) | |
| 522-684, gnl|Mm7|chr3 (129758102-129757940) | |
| 522-684, gnl|monDom2|scaffold_9 (85034260-85034059) | |
| 522-684, gnl|oryCun1|scaffold_203538 (43929-44136) | |
| 522-684, gnl|panTro1|chr3 (127459624-127459833) | |
| 522-684, gnl|rheMac2|chr5 (102595849-102596058) | |
| 522-684, gnl|rn3|chr2 (227365217-227365011) | |
| 522-684, gnl|xenTro1|scaffold_520 (112876-112698) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nco (0.161734) | |
| bla (0.124347) | |
| eep (0.122564) |