Non-Coding RNA Search

Ss1.1-Ovi1-UMC-pd3ov3-011-g11.3

Sequence:


               
               GCATTTTACCTAAAACCTGTGAACAGGTGCAGGGAACTTCAGATTTAAGCAAGCTGCTGA
TTATCCAAGCATCTGAGCCTGTTAAAAATAGCAACACCAAGGCCATGGCCCACACCAGTT
TTGAAATGACCAAGAGAGACTATAACTGGAAGCGAAAAGATGAGTTGGAAGCTGGAACCC
ATTTTAGAAAAGGATATTAATGGCACTAATGTGATATGTGGAGTCAGGTTAAAGACCAAG
CTAATATCCTGACTCAAGTGCCGAACGATGATCTGGCAAGGAGTTTATTTAGAAATTGCT
AAAACACTTTACTGCTGCATTTATTTTACAAGTGATTGATGGACTGCTCCAAAAGCTCTG
ATTTTAAGTTGTTACATTATACTTGAGATGTTCAAAATTCTTCAGGATAATATATCCTAA
AATTTATGGCCTAGCAAATGAAATCCTGTATCCAGCTGAGGGCAAGTTATAATAGAGTAC
AAGTTATCACAAGCGTAAATTAACATATTACTATTCTAAAGCATATGATGTATAATTTTG
ATTTGTGATATTGCTATAGTAAGTATCTCCCTAACATTTTTTCAAAGCTATTTCCCCCAT
TCCCAGTTTAGTAAATATTGGAAAATGGAACTCTATTCCATAATCTCAGTTTCTGAAAGC
AAAGCTTAAGAGAAATTAACAAGCTTACATTGCATACTATTTTTGATATCACTTTTCATT
TTATTTTAAAGTCCAAATAAAATTAAATTTTATGGTCTGATAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCATTTTACCTAAAACCTGTGAACAGGTGCAGGGAACTTCAGATTTAAGCAAGCTGCTGA
TTATCCAAGCATCTGAGCCTGTTAAAAATAGCAACACCAAGGCCATGGCCCACACCAGTT
TTGAAATGACCAAGAGAGACTATAACTGGAAGCGAAAAGATGAGTTGGAAGCTGGAACCC
ATTTTAGAAAAGGATATTAATGGCACTAATGTGATATGTGGAGTCAGGTTAAAGACCAAG
CTAATATCCTGACTCAAGTGCCGAACGATGATCTGGCAAGGAGTTTATTTAGAAATTGCT
AAAACACTTTACTGCTGCATTTATTTTACAAGTGATTGATGGACTGCTCCAAAAGCTCTG
ATTTTAAGTTGTTACATTATACTTGAGATGTTCAAAATTCTTCAGGATAATATATCCTAA
AATTTATGGCCTAGCAAATGAAATCCTGTATCCAGCTGAGGGCAAGTTATAATAGAGTAC
AAGTTATCACAAGCGTAAATTAACATATTACTATTCTAAAGCATATGATGTATAATTTTG
ATTTGTGATATTGCTATAGTAAGTATCTCCCTAACATTTTTTCAAAGCTATTTCCCCCAT
TCCCAGTTTAGTAAATATTGGAAAATGGAACTCTATTCCATAATCTCAGTTTCTGAAAGC
AAAGCTTAAGAGAAATTAACAAGCTTACATTGCATACTATTTTTGATATCACTTTTCATT
TTATTTTAAAGTCCAAATAAAATTAAATTTTATGGTCTGATAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               163-754, gnl|bosTau2|chr16 (41644775-41644193)
               

               
               163-754, gnl|Hg17|chr1 (170201895-170201268)
               

               
               163-754, gnl|Mm7|chr1 (161199067-161199660)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               163-754, gnl|bosTau2|chr16 (41644775-41644193)
               

               
               163-754, gnl|Hg17|chr1 (170201895-170201268)
               

               
               163-754, gnl|Mm7|chr1 (161199067-161199660)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	163-754, gnl\|bosTau2\|chr16 (41644775-41644193)
	163-754, gnl\|Hg17\|chr1 (170201895-170201268)
	163-754, gnl\|Mm7\|chr1 (161199067-161199660)