Ss1.1-Ovi2-UMC-peov1-010-a07.3.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCATTAGTGGCATGCTCATTCATTTCTTATCTTTATATTCCAGTAAGTTATTTTGCTCTC ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACAACATAAAAATCCTTGCATA TCTTGTTCGATTGGAGAATTTTAATGTTTTTCATTTATCATTGTAAAACCAAGGACAATT TTATAACTTTTTTGTACGTAGCTGTTACATGTAGGGCAATCTGTCTTTAAGTAGGGATAA ATTACTCTAAAAGAAATGAATCCTAGATAGTTTTCCCTTCAAGTCAAGCGTCTTGTTGTT TAAATAAACTTCTTGTTTAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCATTAGTGGCATGCTCATTCATTTCTTATCTTTATATTCCAGTAAGTTATTTTGCTCTC ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACAACATAAAAATCCTTGCATA TCTTGTTCGATTGGAGAATTTTAATGTTTTTCATTTATCATTGTAAAACCAAGGACAATT TTATAACTTTTTTGTACGTAGCTGTTACATGTAGGGCAATCTGTCTTTAAGTAGGGATAA ATTACTCTAAAAGAAATGAATCCTAGATAGTTTTCCCTTCAAGTCAAGCGTCTTGTTGTT TAAATAAACTTCTTGTTTAAAAAAAAAAAAAAAAAA |
| Aligned organism(s): 45 entry(ies) | More info |
| Aligned organism(s): 45 entry(ies) | Help | Less info |
| 86-322, gnl|bosTau2|chr19 (50865389-50865625) | |
| 86-322, gnl|canFam2|chr9 (8308168-8308689) | |
| 86-322, gnl|canFam2|chr9 (8308693-8308515) | |
| 86-322, gnl|canFam2|chr9 (8308501-8308734) | |
| 86-322, gnl|dasNov1|scaffold_245002 (1551-1034) | |
| 86-322, gnl|dasNov1|scaffold_245002 (1222-1003) | |
| 86-322, gnl|dasNov1|scaffold_62365 (4069-4247) | |
| 86-322, gnl|echTel1|scaffold_285644 (2390-2564) | |
| 86-322, gnl|echTel1|scaffold_292363 (75189-75392) | |
| 86-322, gnl|echTel1|scaffold_35820 (332-865) | |
| 86-322, gnl|galGal2|chr3_random (1365739-1365234) | |
| 86-322, gnl|galGal2|chr3_random (1365230-1365407) | |
| 86-322, gnl|hg17|chr17 (70675419-70675599) | |
| 86-322, gnl|Hg17|chr17 (70675661-70675423) | |
| 86-322, gnl|hg17|chr20 (9815156-9815376) | |
| 86-322, gnl|hg17|chr8 (48602848-48603406) | |
| 86-322, gnl|loxAfr1|scaffold_114101 (1638-2176) | |
| 86-322, gnl|loxAfr1|scaffold_114101 (2180-1993) | |
| 86-322, gnl|loxAfr1|scaffold_114101 (1991-2221) | |
| 86-322, gnl|mm7|chr1 (15021545-15021369) | |
| 86-322, gnl|mm7|chr10 (129175910-129176435) | |
| 86-322, gnl|mm7|chr11 (115632146-115632324) | |
| 86-322, gnl|Mm7|chr11 (115632386-115632150) | |
| 86-322, gnl|monDom2|scaffold_18 (32591446-32591625) | |
| 86-322, gnl|monDom2|scaffold_8 (80961874-80961338) | |
| 86-322, gnl|monDom2|scaffold_9 (37438890-37439093) | |
| 86-322, gnl|oryCun1|scaffold_200778 (50864-51042) | |
| 86-322, gnl|oryCun1|scaffold_212049 (125590-125072) | |
| 86-322, gnl|oryCun1|scaffold_214576 (124252-124038) | |
| 86-322, gnl|panTro1|chr19 (74026101-74026281) | |
| 86-322, gnl|panTro1|chr21 (9705682-9705903) | |
| 86-322, gnl|panTro1|chr7 (50165269-50165827) | |
| 86-322, gnl|rheMac2|chr10 (43197061-43197289) | |
| 86-322, gnl|rheMac2|chr16 (70461312-70461492) | |
| 86-322, gnl|rheMac2|chr8 (50033845-50034397) | |
| 86-322, gnl|rn3|chr10 (105622600-105622778) | |
| 86-322, gnl|rn3|chr5 (15326268-15326444) | |
| 86-322, gnl|rn3|chr6 (108172482-108171975) | |
| 86-322, gnl|xenTro1|scaffold_632 (158963-158745) | |
| 90-308, gnl|bosTau2|chr24 (19936956-19936745) | |
| 90-308, gnl|Hg17|chrX (114775884-114775657) | |
| 90-308, gnl|Mm7|chr16 (19726389-19726158) | |
| 127-301, gnl|bosTau2|chr19 (30219215-30219388) | |
| 127-301, gnl|Hg17|chr6 (29711407-29711231) | |
| 127-301, gnl|Mm7|chr2 (36397138-36397312) |
| Aligned organism(s): 45 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 86-322, gnl|bosTau2|chr19 (50865389-50865625) | |
| 86-322, gnl|canFam2|chr9 (8308168-8308689) | |
| 86-322, gnl|canFam2|chr9 (8308693-8308515) | |
| 86-322, gnl|canFam2|chr9 (8308501-8308734) | |
| 86-322, gnl|dasNov1|scaffold_245002 (1551-1034) | |
| 86-322, gnl|dasNov1|scaffold_245002 (1222-1003) | |
| 86-322, gnl|dasNov1|scaffold_62365 (4069-4247) | |
| 86-322, gnl|echTel1|scaffold_285644 (2390-2564) | |
| 86-322, gnl|echTel1|scaffold_292363 (75189-75392) | |
| 86-322, gnl|echTel1|scaffold_35820 (332-865) | |
| 86-322, gnl|galGal2|chr3_random (1365739-1365234) | |
| 86-322, gnl|galGal2|chr3_random (1365230-1365407) | |
| 86-322, gnl|hg17|chr17 (70675419-70675599) | |
| 86-322, gnl|Hg17|chr17 (70675661-70675423) | |
| 86-322, gnl|hg17|chr20 (9815156-9815376) | |
| 86-322, gnl|hg17|chr8 (48602848-48603406) | |
| 86-322, gnl|loxAfr1|scaffold_114101 (1638-2176) | |
| 86-322, gnl|loxAfr1|scaffold_114101 (2180-1993) | |
| 86-322, gnl|loxAfr1|scaffold_114101 (1991-2221) | |
| 86-322, gnl|mm7|chr1 (15021545-15021369) | |
| 86-322, gnl|mm7|chr10 (129175910-129176435) | |
| 86-322, gnl|mm7|chr11 (115632146-115632324) | |
| 86-322, gnl|Mm7|chr11 (115632386-115632150) | |
| 86-322, gnl|monDom2|scaffold_18 (32591446-32591625) | |
| 86-322, gnl|monDom2|scaffold_8 (80961874-80961338) | |
| 86-322, gnl|monDom2|scaffold_9 (37438890-37439093) | |
| 86-322, gnl|oryCun1|scaffold_200778 (50864-51042) | |
| 86-322, gnl|oryCun1|scaffold_212049 (125590-125072) | |
| 86-322, gnl|oryCun1|scaffold_214576 (124252-124038) | |
| 86-322, gnl|panTro1|chr19 (74026101-74026281) | |
| 86-322, gnl|panTro1|chr21 (9705682-9705903) | |
| 86-322, gnl|panTro1|chr7 (50165269-50165827) | |
| 86-322, gnl|rheMac2|chr10 (43197061-43197289) | |
| 86-322, gnl|rheMac2|chr16 (70461312-70461492) | |
| 86-322, gnl|rheMac2|chr8 (50033845-50034397) | |
| 86-322, gnl|rn3|chr10 (105622600-105622778) | |
| 86-322, gnl|rn3|chr5 (15326268-15326444) | |
| 86-322, gnl|rn3|chr6 (108172482-108171975) | |
| 86-322, gnl|xenTro1|scaffold_632 (158963-158745) | |
| 90-308, gnl|bosTau2|chr24 (19936956-19936745) | |
| 90-308, gnl|Hg17|chrX (114775884-114775657) | |
| 90-308, gnl|Mm7|chr16 (19726389-19726158) | |
| 127-301, gnl|bosTau2|chr19 (30219215-30219388) | |
| 127-301, gnl|Hg17|chr6 (29711407-29711231) | |
| 127-301, gnl|Mm7|chr2 (36397138-36397312) |
| Expressed library(ies): 8 entry(ies) | More info |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
| amn (0.417711) | |
| fce (0.271592) | |
| cbl (0.229595) | |
| nlu (0.191681) | |
| fty (0.17584) | |
| fbs (0.175346) | |
| ese (0.126502) | |
| jej (0.0989218) |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| amn (0.417711) | |
| fce (0.271592) | |
| cbl (0.229595) | |
| nlu (0.191681) | |
| fty (0.17584) | |
| fbs (0.175346) | |
| ese (0.126502) | |
| jej (0.0989218) |