Non-Coding RNA Search

Ss1.1-Pey1-03A08.5

Sequence:


               
               GAGCTTTGCCAAGTAGTGGTTAGAGGGCATTGATTTTTCTGATGGTAAGGTGAATTAAGC
ATATTCTTTCTGATCATGGTTGCATTATTAAATCCCATTATTCACAGTTTTAAAAATCAC
AGTACTTTTTGTTTTTCAAAAATATAACACAATGTTATGCCATGCTGTAAATTGAGTTAT
TTTATCTAGCAAAAACTCAGGAATATTACCTATAAGGGAGATGTTAATTTAATTTTCCAC
TAAATTTAGTATCTATTAACCAGAGCCTAAAATTTTATACTCCAGTTAGATAAGAGCTTT
TACCCAAGTTTAATTTGTCTTTCAGGACAGTTCTTTGCTTCTAAATGTTTGAAAAGATTT
TTTAAAATAAGTAGTGCTATGTTTGTTGTTTCTATCCTTTTAAATCTTGATTGTAATTAG
AGTATTCTACCCTTCATGTCTTTTTTTCCCCTACATTTCATTTCCGAATAGCTTTCAAAT
GTATGAAAAAGTATTAGCAATCGAAAACTTAGTAATATTACTAAGTTATACATGTTTAAA
CATGATATTAGACATTATATTAGCGTATTTCTCTTGTTAATAGTACTATTTTTGCTTCTA
TATATTTATGTCTAGCTTTTATATGTAATTTATCTAGTGTTTATAAAATGTGATTTGTAA
TAAATATTGTTAAAATGAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGCTTTGCCAAGTAGTGGTTAGAGGGCATTGATTTTTCTGATGGTAAGGTGAATTAAGC
ATATTCTTTCTGATCATGGTTGCATTATTAAATCCCATTATTCACAGTTTTAAAAATCAC
AGTACTTTTTGTTTTTCAAAAATATAACACAATGTTATGCCATGCTGTAAATTGAGTTAT
TTTATCTAGCAAAAACTCAGGAATATTACCTATAAGGGAGATGTTAATTTAATTTTCCAC
TAAATTTAGTATCTATTAACCAGAGCCTAAAATTTTATACTCCAGTTAGATAAGAGCTTT
TACCCAAGTTTAATTTGTCTTTCAGGACAGTTCTTTGCTTCTAAATGTTTGAAAAGATTT
TTTAAAATAAGTAGTGCTATGTTTGTTGTTTCTATCCTTTTAAATCTTGATTGTAATTAG
AGTATTCTACCCTTCATGTCTTTTTTTCCCCTACATTTCATTTCCGAATAGCTTTCAAAT
GTATGAAAAAGTATTAGCAATCGAAAACTTAGTAATATTACTAAGTTATACATGTTTAAA
CATGATATTAGACATTATATTAGCGTATTTCTCTTGTTAATAGTACTATTTTTGCTTCTA
TATATTTATGTCTAGCTTTTATATGTAATTTATCTAGTGTTTATAAAATGTGATTTGTAA
TAAATATTGTTAAAATGAAAAAAA

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

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               2-441, gnl|bosTau2|chrX (24627056-24627507)
               

               
               2-441, gnl|Hg17|chrX (46497072-46497834)
               

               
               2-441, gnl|Mm7|chrX (18832694-18833076)
               


               
               452-684, gnl|bosTau2|chrX (24627494-24627715)
               

               
               452-684, gnl|Hg17|chrX (46497821-46498819)
               

               
               452-684, gnl|Mm7|chrX (18833063-18833275)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-441, gnl|bosTau2|chrX (24627056-24627507)
               

               
               2-441, gnl|Hg17|chrX (46497072-46497834)
               

               
               2-441, gnl|Mm7|chrX (18832694-18833076)
               


               
               452-684, gnl|bosTau2|chrX (24627494-24627715)
               

               
               452-684, gnl|Hg17|chrX (46497821-46498819)
               

               
               452-684, gnl|Mm7|chrX (18833063-18833275)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ste (0.135208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ste (0.135208)

	2-441, gnl\|bosTau2\|chrX (24627056-24627507)
	2-441, gnl\|Hg17\|chrX (46497072-46497834)
	2-441, gnl\|Mm7\|chrX (18832694-18833076)

	452-684, gnl\|bosTau2\|chrX (24627494-24627715)
	452-684, gnl\|Hg17\|chrX (46497821-46498819)
	452-684, gnl\|Mm7\|chrX (18833063-18833275)