Ss1.1-Pey1-04A11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTGAAGCAGGAAATCAAAGTTTTCTTTGTGAAATACAATGATCCCATCTATGTGAAGCT AGAGAAATTGGACATCATGATTCGCTTGGCATCCCAAGCCAACATTGCTCAGGTTCTAGC AGAACTGAAGGAATATGCCACAGAAGTGGATGTCGACTTTGTACGCAAAGCTGTACGAGC CATTGGACGGTGTGCCATCAAGGTGGAGCAATCTGCAGAGCGCTGTGTAAGCACATTGCT GGATCTTATCCAAACCAAAGTAAATTATGTGGTCCAAGAGGCGATTGTTGTCATCAGGGA CATCTTCCGCAAATATCCCAACAAGTACGAAAGTATCATAGCTACACTGTGTGAGAACTT AGACTCACTGGATGAGCCAGATGCTCGAGCAGCTATGATTTGGATTGTGGGAGAATATGC TGAAAGAATCGACAATGCAGATGAATTACTAGAGAGTTTCCTGGAAGGTTTTCATGATGA AAGCACCCAGGTGCAGCTCACTCTGCTTACTGCCATAGTGAAGCTGTTTCTCAAGAAACC TTCAGAAACACAGGAGCTGGTACAGCAGGTCTTGAGTTTGGCAACACAGGATTCTGATAA TCCTGACCTTCGAGACCGGGGCTATATTTATTGGCGCCTTCTCTCAACTGACCCTGTCAC AGCCAAAGAAGTCGTCTTGTCTGAGAAACCACTGATCTCTGAGGAGACAGATCTTATTGA GCCAACTCTCTTGGATGAGCTCATCTGTCACATTGGTTCTTTGGCCTCAGTGTACCATAA GCCTCCCAATGCTTTTGTGGAAGGAAGTCATGGAATCCATCGTAAACACTTGCCAATACA TCATGGAAGCACTGACGCAGGTGACAGCCCTGTTGGCACCACCACTGCCACCAATCTGGA ACAGCCTCAGGTTATCCCCTCTCAAGGTGACCTTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTGAAGCAGGAAATCAAAGTTTTCTTTGTGAAATACAATGATCCCATCTATGTGAAGCT AGAGAAATTGGACATCATGATTCGCTTGGCATCCCAAGCCAACATTGCTCAGGTTCTAGC AGAACTGAAGGAATATGCCACAGAAGTGGATGTCGACTTTGTACGCAAAGCTGTACGAGC CATTGGACGGTGTGCCATCAAGGTGGAGCAATCTGCAGAGCGCTGTGTAAGCACATTGCT GGATCTTATCCAAACCAAAGTAAATTATGTGGTCCAAGAGGCGATTGTTGTCATCAGGGA CATCTTCCGCAAATATCCCAACAAGTACGAAAGTATCATAGCTACACTGTGTGAGAACTT AGACTCACTGGATGAGCCAGATGCTCGAGCAGCTATGATTTGGATTGTGGGAGAATATGC TGAAAGAATCGACAATGCAGATGAATTACTAGAGAGTTTCCTGGAAGGTTTTCATGATGA AAGCACCCAGGTGCAGCTCACTCTGCTTACTGCCATAGTGAAGCTGTTTCTCAAGAAACC TTCAGAAACACAGGAGCTGGTACAGCAGGTCTTGAGTTTGGCAACACAGGATTCTGATAA TCCTGACCTTCGAGACCGGGGCTATATTTATTGGCGCCTTCTCTCAACTGACCCTGTCAC AGCCAAAGAAGTCGTCTTGTCTGAGAAACCACTGATCTCTGAGGAGACAGATCTTATTGA GCCAACTCTCTTGGATGAGCTCATCTGTCACATTGGTTCTTTGGCCTCAGTGTACCATAA GCCTCCCAATGCTTTTGTGGAAGGAAGTCATGGAATCCATCGTAAACACTTGCCAATACA TCATGGAAGCACTGACGCAGGTGACAGCCCTGTTGGCACCACCACTGCCACCAATCTGGA ACAGCCTCAGGTTATCCCCTCTCAAGGTGACCTTCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 3-114, gnl|bosTau2|chr17 (39373744-39373633) | |
| 3-114, gnl|canFam2|chr26 (25686412-25686524) | |
| 3-114, gnl|danRer3|chr5 (14307941-14307839) | |
| 3-114, gnl|dasNov1|scaffold_8146 (95205-95317) | |
| 3-114, gnl|echTel1|scaffold_102711 (4929-5048) | |
| 3-114, gnl|fr1|chrUn (2109158-2109046) | |
| 3-114, gnl|galGal2|chr15 (10997955-10997854) | |
| 3-114, gnl|hg17|chr22 (28072233-28072345) | |
| 3-114, gnl|Hg17|chr22 (28072357-28072246) | |
| 3-114, gnl|loxAfr1|scaffold_8358 (34353-34463) | |
| 3-114, gnl|mm7|chr11 (4975230-4975125) | |
| 3-114, gnl|Mm7|chr11 (4975111-4975226) | |
| 3-114, gnl|monDom2|scaffold_89 (3145035-3145137) | |
| 3-114, gnl|oryCun1|scaffold_136033 (7844-7741) | |
| 3-114, gnl|panTro1|chr23_random (8689957-8690069) | |
| 3-114, gnl|rheMac2|chr10 (73179619-73179731) | |
| 3-114, gnl|rn3|chr14 (85695067-85694962) | |
| 3-114, gnl|tetNig1|chr12 (6675538-6675440) | |
| 3-114, gnl|xenTro1|scaffold_207 (423429-423531) | |
| 322-493, gnl|bosTau2|chr17 (39372117-39371946) | |
| 322-493, gnl|canFam2|chr26 (25684231-25684415) | |
| 322-493, gnl|danRer3|chr5 (14310423-14310247) | |
| 322-493, gnl|dasNov1|scaffold_8146 (92910-93087) | |
| 322-493, gnl|echTel1|scaffold_102711 (2074-2251) | |
| 322-493, gnl|fr1|chrUn (2110235-2110050) | |
| 322-493, gnl|galGal2|chr15 (10999565-10999384) | |
| 322-493, gnl|hg17|chr22 (28069749-28069933) | |
| 322-493, gnl|Hg17|chr22 (28069930-28069758) | |
| 322-493, gnl|loxAfr1|scaffold_8358 (32218-32402) | |
| 322-493, gnl|mm7|chr11 (4978427-4978244) | |
| 322-493, gnl|Mm7|chr11 (4978245-4978416) | |
| 322-493, gnl|monDom2|scaffold_89 (3142836-3143015) | |
| 322-493, gnl|oryCun1|scaffold_136033 (10786-10602) | |
| 322-493, gnl|panTro1|chr23_random (8687472-8687656) | |
| 322-493, gnl|rheMac2|chr10 (73176823-73177007) | |
| 322-493, gnl|rn3|chr14 (85698063-85697879) | |
| 322-493, gnl|tetNig1|chr12 (6676626-6676455) | |
| 322-493, gnl|xenTro1|scaffold_207 (421071-421243) | |
| 587-804, gnl|bosTau2|chr17 (39366454-39366237) | |
| 587-804, gnl|Hg17|chr22 (28062308-28062089) | |
| 587-804, gnl|Mm7|chr11 (4983630-4983847) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-114, gnl|bosTau2|chr17 (39373744-39373633) | |
| 3-114, gnl|canFam2|chr26 (25686412-25686524) | |
| 3-114, gnl|danRer3|chr5 (14307941-14307839) | |
| 3-114, gnl|dasNov1|scaffold_8146 (95205-95317) | |
| 3-114, gnl|echTel1|scaffold_102711 (4929-5048) | |
| 3-114, gnl|fr1|chrUn (2109158-2109046) | |
| 3-114, gnl|galGal2|chr15 (10997955-10997854) | |
| 3-114, gnl|hg17|chr22 (28072233-28072345) | |
| 3-114, gnl|Hg17|chr22 (28072357-28072246) | |
| 3-114, gnl|loxAfr1|scaffold_8358 (34353-34463) | |
| 3-114, gnl|mm7|chr11 (4975230-4975125) | |
| 3-114, gnl|Mm7|chr11 (4975111-4975226) | |
| 3-114, gnl|monDom2|scaffold_89 (3145035-3145137) | |
| 3-114, gnl|oryCun1|scaffold_136033 (7844-7741) | |
| 3-114, gnl|panTro1|chr23_random (8689957-8690069) | |
| 3-114, gnl|rheMac2|chr10 (73179619-73179731) | |
| 3-114, gnl|rn3|chr14 (85695067-85694962) | |
| 3-114, gnl|tetNig1|chr12 (6675538-6675440) | |
| 3-114, gnl|xenTro1|scaffold_207 (423429-423531) | |
| 322-493, gnl|bosTau2|chr17 (39372117-39371946) | |
| 322-493, gnl|canFam2|chr26 (25684231-25684415) | |
| 322-493, gnl|danRer3|chr5 (14310423-14310247) | |
| 322-493, gnl|dasNov1|scaffold_8146 (92910-93087) | |
| 322-493, gnl|echTel1|scaffold_102711 (2074-2251) | |
| 322-493, gnl|fr1|chrUn (2110235-2110050) | |
| 322-493, gnl|galGal2|chr15 (10999565-10999384) | |
| 322-493, gnl|hg17|chr22 (28069749-28069933) | |
| 322-493, gnl|Hg17|chr22 (28069930-28069758) | |
| 322-493, gnl|loxAfr1|scaffold_8358 (32218-32402) | |
| 322-493, gnl|mm7|chr11 (4978427-4978244) | |
| 322-493, gnl|Mm7|chr11 (4978245-4978416) | |
| 322-493, gnl|monDom2|scaffold_89 (3142836-3143015) | |
| 322-493, gnl|oryCun1|scaffold_136033 (10786-10602) | |
| 322-493, gnl|panTro1|chr23_random (8687472-8687656) | |
| 322-493, gnl|rheMac2|chr10 (73176823-73177007) | |
| 322-493, gnl|rn3|chr14 (85698063-85697879) | |
| 322-493, gnl|tetNig1|chr12 (6676626-6676455) | |
| 322-493, gnl|xenTro1|scaffold_207 (421071-421243) | |
| 587-804, gnl|bosTau2|chr17 (39366454-39366237) | |
| 587-804, gnl|Hg17|chr22 (28062308-28062089) | |
| 587-804, gnl|Mm7|chr11 (4983630-4983847) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ecc (0.115035) |