Non-Coding RNA Search

Ss1.1-Pey1-07D06.5

Sequence:


               
               AGATTATAACCATTGTTACACGTGTGCAATTTTATTTAACAGTGCTGTGTACTTAGTGAA
CAAGTAAGTTCTTATATGAAATATCTAGTCTTGCTGGGTATTTAGAAGTGCTTGATGTAT
TTAAAAGTAGTAGTAGTAAAATAATGCTTCTTGTAAATAGCTTTTAAAAACATGGGAAAT
GCTGTCTTTGGAAATGGAATTGTTAAACCTCCTCTGACCAGTATACTCTGCTCATTCATT
GGGTTGATGGAAGTGGGAGGGAAGATTGCAAAAACATGTTTTGCTAGTGTGTACTAAAAA
ATTTCACCTTATTGGTTGCTCTATGTTACATGCATTTTGTTTAACTTTACTGTATATATT
ATGTATATACTGGACAAATGGGTTCCAATTTTATAATATCTAGTCTCTAGATATTAAAAA
GAGGTTGCCAATGTATGACAAAAGTAGAGTTAGTAAACTAACACATTTTGTACACTTGTG
TTAAATTCCATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGATTATAACCATTGTTACACGTGTGCAATTTTATTTAACAGTGCTGTGTACTTAGTGAA
CAAGTAAGTTCTTATATGAAATATCTAGTCTTGCTGGGTATTTAGAAGTGCTTGATGTAT
TTAAAAGTAGTAGTAGTAAAATAATGCTTCTTGTAAATAGCTTTTAAAAACATGGGAAAT
GCTGTCTTTGGAAATGGAATTGTTAAACCTCCTCTGACCAGTATACTCTGCTCATTCATT
GGGTTGATGGAAGTGGGAGGGAAGATTGCAAAAACATGTTTTGCTAGTGTGTACTAAAAA
ATTTCACCTTATTGGTTGCTCTATGTTACATGCATTTTGTTTAACTTTACTGTATATATT
ATGTATATACTGGACAAATGGGTTCCAATTTTATAATATCTAGTCTCTAGATATTAAAAA
GAGGTTGCCAATGTATGACAAAAGTAGAGTTAGTAAACTAACACATTTTGTACACTTGTG
TTAAATTCCATT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-178, gnl|bosTau2|chr28 (7786002-7785823)
               

               
               1-178, gnl|Hg17|chr20 (34099965-34099814)
               

               
               1-178, gnl|Mm7|chr15 (103607430-103607268)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-178, gnl|bosTau2|chr28 (7786002-7785823)
               

               
               1-178, gnl|Hg17|chr20 (34099965-34099814)
               

               
               1-178, gnl|Mm7|chr15 (103607430-103607268)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               pty (0.142714)
               

               
               nmm (0.132802)
               

               
               spc (0.113366)
               

               
               ldo (0.0970026)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pty (0.142714)
               

               
               nmm (0.132802)
               

               
               spc (0.113366)
               

               
               ldo (0.0970026)

	1-178, gnl\|bosTau2\|chr28 (7786002-7785823)
	1-178, gnl\|Hg17\|chr20 (34099965-34099814)
	1-178, gnl\|Mm7\|chr15 (103607430-103607268)