Ss1.1-Pey1-09C10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGATTACCCCGAGGTGATGAAGACACGGATCCGGGACAGGAGCTTGGCCGCAGGCCTCA ACGAGTCTCGGCTGCCCGAGTTCACAGAGAGTGAGAAGAGGAGGATCAATGGCACCTATG ACTTTTTTGGGTTCAATCACTACACCACTGTCCTGGCCTACAATCTCGACTCTGACTCTT CCATCTCCTCCTTTGAAGCGGACAGGGGAGTGGCCTCGATTACAGATCGCTCTTGGCCAG ACTCTGGCTCCTTCTGGCTGAAGATGACACCTTTTGGCTTCCGGAGGATCCTGAACTGGT TAAAGGAGGAGTACAACAACCCCCCGATTTATGTAACGGAGAACGGGGTGTCCCAACGAG AAGAATCAGACCTCAATGACACTGCAAGGATCTACTATCTCCGCAGTTACCTCAACGAGG CACTCAAAGCTGTGCAGGACAAGGTGGACCTTCGAGGATACACGGTTTGGACTCTGATGG ACAACTTTGAGTGGGCCACAGGCTTTGCAGAGAGGTTTGGTCTGCATTTTGTAAACTACA CTGACACTTCTCTGCCAAGGATCCCCAAAGCCTCGGCCAAGTTCTACGCCTCCATAGTCC GGTGCAACGGCTTCCCTGACCCTGCGGCAGGGCCACACCCTTGTCTCCAGCAAGAAGGTG CTGAGCCCACCATCAGCCCCATGAGCCAGGAGGACGTTCAGTTCCTGGGGCTAACACTGG GTACCACAGAGGCCCAGACGGCGCTGTATGTACTCTTTGCTCTTCTGCTTCTTGGAGTCT GTGGTGTGGCATTTCTGTCCTACAAGTACTGTAAGCGCTCCAAGCAAAAGGAAACACAAC CAGGTGAACAGGAATTGAACCGTATTTCTTCCTTCTGACCCACAAGTTCCCACCTCCTCC ACTTCTGCAAATTAGGCCTACTTTCTTTGCAAGCCTTTGCACCCCCGGGACCACTGAGGA TCTTACACTCTGCTCCTACCAGATTGCTCTGTAAAAGCCTCTGCGCTGTTAGAAATTAAG TGACCCTTGTTGAAGGATTTCAAGTCCCTGATTAAAATGGAAATATCCCCAAAAAAAAAA AGAATCAGGAATTCATTTGGGCGTGAGATCACCCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGATTACCCCGAGGTGATGAAGACACGGATCCGGGACAGGAGCTTGGCCGCAGGCCTCA ACGAGTCTCGGCTGCCCGAGTTCACAGAGAGTGAGAAGAGGAGGATCAATGGCACCTATG ACTTTTTTGGGTTCAATCACTACACCACTGTCCTGGCCTACAATCTCGACTCTGACTCTT CCATCTCCTCCTTTGAAGCGGACAGGGGAGTGGCCTCGATTACAGATCGCTCTTGGCCAG ACTCTGGCTCCTTCTGGCTGAAGATGACACCTTTTGGCTTCCGGAGGATCCTGAACTGGT TAAAGGAGGAGTACAACAACCCCCCGATTTATGTAACGGAGAACGGGGTGTCCCAACGAG AAGAATCAGACCTCAATGACACTGCAAGGATCTACTATCTCCGCAGTTACCTCAACGAGG CACTCAAAGCTGTGCAGGACAAGGTGGACCTTCGAGGATACACGGTTTGGACTCTGATGG ACAACTTTGAGTGGGCCACAGGCTTTGCAGAGAGGTTTGGTCTGCATTTTGTAAACTACA CTGACACTTCTCTGCCAAGGATCCCCAAAGCCTCGGCCAAGTTCTACGCCTCCATAGTCC GGTGCAACGGCTTCCCTGACCCTGCGGCAGGGCCACACCCTTGTCTCCAGCAAGAAGGTG CTGAGCCCACCATCAGCCCCATGAGCCAGGAGGACGTTCAGTTCCTGGGGCTAACACTGG GTACCACAGAGGCCCAGACGGCGCTGTATGTACTCTTTGCTCTTCTGCTTCTTGGAGTCT GTGGTGTGGCATTTCTGTCCTACAAGTACTGTAAGCGCTCCAAGCAAAAGGAAACACAAC CAGGTGAACAGGAATTGAACCGTATTTCTTCCTTCTGACCCACAAGTTCCCACCTCCTCC ACTTCTGCAAATTAGGCCTACTTTCTTTGCAAGCCTTTGCACCCCCGGGACCACTGAGGA TCTTACACTCTGCTCCTACCAGATTGCTCTGTAAAAGCCTCTGCGCTGTTAGAAATTAAG TGACCCTTGTTGAAGGATTTCAAGTCCCTGATTAAAATGGAAATATCCCCAAAAAAAAAA AGAATCAGGAATTCATTTGGGCGTGAGATCACCCTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 192-434, gnl|bosTau2|chr2 (37943197-37943438) | |
| 192-434, gnl|canFam2|chr19 (41595218-41595385) | |
| 192-434, gnl|danRer3|chr9 (42642638-42642787) | |
| 192-434, gnl|dasNov1|scaffold_47286 (516-664) | |
| 192-434, gnl|echTel1|scaffold_314319 (16986-16821) | |
| 192-434, gnl|fr1|chrUn (26886783-26886932) | |
| 192-434, gnl|galGal2|chr7 (31329108-31329268) | |
| 192-434, gnl|hg17|chr2 (136381941-136382107) | |
| 192-434, gnl|Hg17|chr2 (136382196-136381955) | |
| 192-434, gnl|loxAfr1|scaffold_3003 (13808-13670) | |
| 192-434, gnl|mm7|chr1 (128167606-128167769) | |
| 192-434, gnl|Mm7|chr1 (128167858-128167617) | |
| 192-434, gnl|monDom2|scaffold_2 (21394787-21394952) | |
| 192-434, gnl|oryCun1|scaffold_195653 (44328-44495) | |
| 192-434, gnl|panTro1|chr13 (25371247-25371413) | |
| 192-434, gnl|rheMac2|chr13 (116369648-116369482) | |
| 192-434, gnl|rn3|chr13 (41007106-41007269) | |
| 192-434, gnl|tetNig1|chr2 (16084101-16083952) | |
| 192-434, gnl|xenTro1|scaffold_31 (1432150-1431994) | |
| 656-1116, gnl|bosTau2|chr2 (37945092-37945533) | |
| 656-1116, gnl|Hg17|chr2 (136379848-136379401) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 192-434, gnl|bosTau2|chr2 (37943197-37943438) | |
| 192-434, gnl|canFam2|chr19 (41595218-41595385) | |
| 192-434, gnl|danRer3|chr9 (42642638-42642787) | |
| 192-434, gnl|dasNov1|scaffold_47286 (516-664) | |
| 192-434, gnl|echTel1|scaffold_314319 (16986-16821) | |
| 192-434, gnl|fr1|chrUn (26886783-26886932) | |
| 192-434, gnl|galGal2|chr7 (31329108-31329268) | |
| 192-434, gnl|hg17|chr2 (136381941-136382107) | |
| 192-434, gnl|Hg17|chr2 (136382196-136381955) | |
| 192-434, gnl|loxAfr1|scaffold_3003 (13808-13670) | |
| 192-434, gnl|mm7|chr1 (128167606-128167769) | |
| 192-434, gnl|Mm7|chr1 (128167858-128167617) | |
| 192-434, gnl|monDom2|scaffold_2 (21394787-21394952) | |
| 192-434, gnl|oryCun1|scaffold_195653 (44328-44495) | |
| 192-434, gnl|panTro1|chr13 (25371247-25371413) | |
| 192-434, gnl|rheMac2|chr13 (116369648-116369482) | |
| 192-434, gnl|rn3|chr13 (41007106-41007269) | |
| 192-434, gnl|tetNig1|chr2 (16084101-16083952) | |
| 192-434, gnl|xenTro1|scaffold_31 (1432150-1431994) | |
| 656-1116, gnl|bosTau2|chr2 (37945092-37945533) | |
| 656-1116, gnl|Hg17|chr2 (136379848-136379401) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| nje (0.66368) | |
| jej (0.593531) | |
| cje (0.330469) | |
| sin (0.174948) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nje (0.66368) | |
| jej (0.593531) | |
| cje (0.330469) | |
| sin (0.174948) |