Non-Coding RNA Search

Ss1.1-Pey1-11B01.5

Sequence:


               
               ATGGAACGTTGATAGAGTTCGCGGGTCTCACTGCTGGGGGCTGGAGCCACACGCAGTGCG
CCGCCGCGCGCCAAAGCGGGAATCCGGGAGGCGGGCACCTCTGCAATTAATGCACGCGTT
TAAAACTCCCGAACCTGCGGACGCCATGCACAGGAAGCACCTCCAGGAGATTCCCGACCA
GAGTAGCAACGTTACCACCAGCTTCACGTGGGGATGGGATTCTAGCAAGACTTCTGAACT
GCTTTCAGGCATGGGGGTCTCTGCCTTGGAGAAGGAGGAGGTGGACAGTGAGAACATCCC
CCAGGAACTGCTTTCAAACCTGGGCCACCCGCAGAGCCCTCCACGAAAACGGCTGAAGAG
CAAAGGGAATGAAAAGGACTTTGTGATCGTCCGCAGACCTAAGCTAAATCGAGAGAACTT
TCCAGGTGTTTCATGGGACTCCCTTCCAGATGAGCTGCTCTTAGGAATCTTTTCCTGTCT
GTGCCTCCCTGAGCTCCTGAAAGTCTCCAGCGTTTGTAAAAGATGGTATCATCTAGCGTT
TGACGAGTCTCTCTGGCAGACCTTAGACCTCACAGGTAGGAACCTCCACCCAGATGTGAC
TGGTCGGCTGCTGTCTCGAGGGGTGGTTGCCTTCCGCTGTCCACGATCATTTATGGACCA
ACCGCTAGTCGAACATTTCAGCCCTTTTCGTGTACAGCACATGGACTTGTCAAACTCTGT
GATCGATGTGTCTACCCTCCACGGCCTTCTGTCCCAGTGCTCCAAGTTGCAGAATCTCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGGAACGTTGATAGAGTTCGCGGGTCTCACTGCTGGGGGCTGGAGCCACACGCAGTGCG
CCGCCGCGCGCCAAAGCGGGAATCCGGGAGGCGGGCACCTCTGCAATTAATGCACGCGTT
TAAAACTCCCGAACCTGCGGACGCCATGCACAGGAAGCACCTCCAGGAGATTCCCGACCA
GAGTAGCAACGTTACCACCAGCTTCACGTGGGGATGGGATTCTAGCAAGACTTCTGAACT
GCTTTCAGGCATGGGGGTCTCTGCCTTGGAGAAGGAGGAGGTGGACAGTGAGAACATCCC
CCAGGAACTGCTTTCAAACCTGGGCCACCCGCAGAGCCCTCCACGAAAACGGCTGAAGAG
CAAAGGGAATGAAAAGGACTTTGTGATCGTCCGCAGACCTAAGCTAAATCGAGAGAACTT
TCCAGGTGTTTCATGGGACTCCCTTCCAGATGAGCTGCTCTTAGGAATCTTTTCCTGTCT
GTGCCTCCCTGAGCTCCTGAAAGTCTCCAGCGTTTGTAAAAGATGGTATCATCTAGCGTT
TGACGAGTCTCTCTGGCAGACCTTAGACCTCACAGGTAGGAACCTCCACCCAGATGTGAC
TGGTCGGCTGCTGTCTCGAGGGGTGGTTGCCTTCCGCTGTCCACGATCATTTATGGACCA
ACCGCTAGTCGAACATTTCAGCCCTTTTCGTGTACAGCACATGGACTTGTCAAACTCTGT
GATCGATGTGTCTACCCTCCACGGCCTTCTGTCCCAGTGCTCCAAGTTGCAGAATCTCAG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|13097468|gb|AAH03468.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|13097468|gb|AAH03468.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               538-780, gnl|bosTau2|chr11 (67337210-67336969)
               

               
               538-780, gnl|Hg17|chrX (95682230-95682455)
               

               
               538-780, gnl|Mm7|chr15 (9183148-9181851)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               538-780, gnl|bosTau2|chr11 (67337210-67336969)
               

               
               538-780, gnl|Hg17|chrX (95682230-95682455)
               

               
               538-780, gnl|Mm7|chr15 (9183148-9181851)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               eep (0.122564)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	538-780, gnl\|bosTau2\|chr11 (67337210-67336969)
	538-780, gnl\|Hg17\|chrX (95682230-95682455)
	538-780, gnl\|Mm7\|chr15 (9183148-9181851)