Non-Coding RNA Search

Ss1.1-Pey1-13E07.5

Sequence:


               
               AGTGGTTTCTTGGTGACACTGAGGCGGAACAGCTCGAGCCTTGCCACCTCTAGTTTCTTA
CCACAGCTTGGACGTCGGGGTTTTGCCACTGCCAGAGGGACGTCTCAGACTTCATCTTCC
CAAATCTTGGCAGATCACCCCCTTAGCAGGGTCTGCACATCTCAGCCGGGATGAAGCTGG
TTCCCGTAGCCCTCATGTACCTGGGCTCGCTCGCCTTCCTGGGCGCTGACACAGCTCGGC
TCGACGTGGCGGCAGAGTTCCGAAAGAAATGGAATAAGTGGGCTCTAAGTCGTGGAAAAA
GAGAACTTCGGCTGTCCAGCAGCTACCCCACCGGGATCGCCGACTTGAAGGCCGGGCCTG
CCCAGACTGTCATTCGGCCCCAGGATGTGAAGGGCTCCTCTCGCAGCCCCCAGGCCAGCA
TTCCGGATGCAGCCCGCATCCGAGTCAAGCGCTACCGCCAGAGTATGAACAACTTCCAGG
GCCTGCGGAGCTTCGGCTGTCGCTTTGGGACGTGCACCGTGCAGAAGCTGGCGCACCAGA
TCTACCAGTTCACGGACAAAGACAAGGACGGCGTCGCCCCCCGGAGCAAGATCAGCCCCC
AGGGCTACGGCCGCCGGCGCCGACGCTCTCTGCCCGAAGCCAGCCTGGGCCGGACTCTGA
GGTCCCAGGAGCCACAGGCGCACGGGGCCCCGGCCTCCCCGGCGCATCAAGTGCTCGCCA
CTCTCTTTAGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTGGTTTCTTGGTGACACTGAGGCGGAACAGCTCGAGCCTTGCCACCTCTAGTTTCTTA
CCACAGCTTGGACGTCGGGGTTTTGCCACTGCCAGAGGGACGTCTCAGACTTCATCTTCC
CAAATCTTGGCAGATCACCCCCTTAGCAGGGTCTGCACATCTCAGCCGGGATGAAGCTGG
TTCCCGTAGCCCTCATGTACCTGGGCTCGCTCGCCTTCCTGGGCGCTGACACAGCTCGGC
TCGACGTGGCGGCAGAGTTCCGAAAGAAATGGAATAAGTGGGCTCTAAGTCGTGGAAAAA
GAGAACTTCGGCTGTCCAGCAGCTACCCCACCGGGATCGCCGACTTGAAGGCCGGGCCTG
CCCAGACTGTCATTCGGCCCCAGGATGTGAAGGGCTCCTCTCGCAGCCCCCAGGCCAGCA
TTCCGGATGCAGCCCGCATCCGAGTCAAGCGCTACCGCCAGAGTATGAACAACTTCCAGG
GCCTGCGGAGCTTCGGCTGTCGCTTTGGGACGTGCACCGTGCAGAAGCTGGCGCACCAGA
TCTACCAGTTCACGGACAAAGACAAGGACGGCGTCGCCCCCCGGAGCAAGATCAGCCCCC
AGGGCTACGGCCGCCGGCGCCGACGCTCTCTGCCCGAAGCCAGCCTGGGCCGGACTCTGA
GGTCCCAGGAGCCACAGGCGCACGGGGCCCCGGCCTCCCCGGCGCATCAAGTGCTCGCCA
CTCTCTTTAGGA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|1091243|prf||2020431B

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|1091243|prf||2020431B

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               147-271, gnl|bosTau2|chr15 (28078756-28078632)
               

               
               147-271, gnl|Hg17|chr11 (10283800-10283924)
               

               
               147-271, gnl|Mm7|chr7 (106543525-106543650)
               


               
               415-725, gnl|bosTau2|chr15 (28078108-28077795)
               

               
               415-725, gnl|Hg17|chr11 (10284443-10284759)
               

               
               415-725, gnl|Mm7|chr7 (106544129-106544430)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               147-271, gnl|bosTau2|chr15 (28078756-28078632)
               

               
               147-271, gnl|Hg17|chr11 (10283800-10283924)
               

               
               147-271, gnl|Mm7|chr7 (106543525-106543650)
               


               
               415-725, gnl|bosTau2|chr15 (28078108-28077795)
               

               
               415-725, gnl|Hg17|chr11 (10284443-10284759)
               

               
               415-725, gnl|Mm7|chr7 (106544129-106544430)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               pla (1.20305)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (1.20305)
               

               
               eru (0.120048)

	147-271, gnl\|bosTau2\|chr15 (28078756-28078632)
	147-271, gnl\|Hg17\|chr11 (10283800-10283924)
	147-271, gnl\|Mm7\|chr7 (106543525-106543650)

	415-725, gnl\|bosTau2\|chr15 (28078108-28077795)
	415-725, gnl\|Hg17\|chr11 (10284443-10284759)
	415-725, gnl\|Mm7\|chr7 (106544129-106544430)