Ss1.1-Pey1-13H04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCGTCCCGGCTGCGCTCTAATGGGTCGGAGGAGAGCGCCAGATGCTGGGTCCCTCGGCC GGGCCCTTATCCGTCAGCAAGTTCAGCGGAGCCGTAGCCATCGTCACACCGACGCCTGGT TGCACACAAGTGAACTCAATGATGGCTATGATTGGGGTCGTCTCAATCTTCAGTCAGTAA CTGAACAGAGCTCCCTGGATGACTTCCTTGCAACTGCAGAACTTGCAGGAACAGAGTTTG TAGCTGAGAAGCTTAATATTAAGTTTGTGCCTCCTGAAGCTAGAACCGGACTACTGTCTT TTGAGGAGAACCAGAGAATTAAAAAACTCCACGAAGAAAACAAACAGTTTTTGTGTATAC CAAGGAGACCAAAGTGGGACCAAAAAACTAGCCCAGAAGAACTCAAACAGGCAGAGAAAG ACAACTTTCTAGAATGGAGGCGTCAGCTTGTCCGATTGGAAGAGGAACAAAACCTGATAT TGACTCCATTTGAAAGGAATTTGGACTTTTGGCGTCAGCTCTGGAGGGTGATTGAGAGAA GTGATATCGTGGTCCAGATAGTAGATGCTCGAAATCCACTCCTGTTTAGGTGTGAAGATT TGGAGTGTTATGTGAAGTCACTCGATGACAACAAGGAGAATGTCATTCTGATAAATAAGG CAGACTTACTGACGGCCGAGCAGCGGAGTGCCTGGGCCGAATTCTTCGAAAAGGAAAATG TGAAGGTCATTTTCTGGTCAGCTCTTGCGGAAGCCATTCAAGTGACTGGTGACTCTAAGG CTAGGGGTGGAAGAGACCCTGGAGAAGCCATCACAACTGAGGTTGAAAACTCCAGTTGCG ACGAGACCAAACTTCCACACAGTGAGACTGAACACCTTCCGAGTAGTGAAGCTGCCAGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCGTCCCGGCTGCGCTCTAATGGGTCGGAGGAGAGCGCCAGATGCTGGGTCCCTCGGCC GGGCCCTTATCCGTCAGCAAGTTCAGCGGAGCCGTAGCCATCGTCACACCGACGCCTGGT TGCACACAAGTGAACTCAATGATGGCTATGATTGGGGTCGTCTCAATCTTCAGTCAGTAA CTGAACAGAGCTCCCTGGATGACTTCCTTGCAACTGCAGAACTTGCAGGAACAGAGTTTG TAGCTGAGAAGCTTAATATTAAGTTTGTGCCTCCTGAAGCTAGAACCGGACTACTGTCTT TTGAGGAGAACCAGAGAATTAAAAAACTCCACGAAGAAAACAAACAGTTTTTGTGTATAC CAAGGAGACCAAAGTGGGACCAAAAAACTAGCCCAGAAGAACTCAAACAGGCAGAGAAAG ACAACTTTCTAGAATGGAGGCGTCAGCTTGTCCGATTGGAAGAGGAACAAAACCTGATAT TGACTCCATTTGAAAGGAATTTGGACTTTTGGCGTCAGCTCTGGAGGGTGATTGAGAGAA GTGATATCGTGGTCCAGATAGTAGATGCTCGAAATCCACTCCTGTTTAGGTGTGAAGATT TGGAGTGTTATGTGAAGTCACTCGATGACAACAAGGAGAATGTCATTCTGATAAATAAGG CAGACTTACTGACGGCCGAGCAGCGGAGTGCCTGGGCCGAATTCTTCGAAAAGGAAAATG TGAAGGTCATTTTCTGGTCAGCTCTTGCGGAAGCCATTCAAGTGACTGGTGACTCTAAGG CTAGGGGTGGAAGAGACCCTGGAGAAGCCATCACAACTGAGGTTGAAAACTCCAGTTGCG ACGAGACCAAACTTCCACACAGTGAGACTGAACACCTTCCGAGTAGTGAAGCTGCCAGCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 112-251, gnl|bosTau2|chr1 (43658305-43658444) | |
| 112-251, gnl|canFam2|chr33 (34133161-34133016) | |
| 112-251, gnl|danRer3|chr15 (4148523-4148664) | |
| 112-251, gnl|echTel1|scaffold_83906 (1612-1750) | |
| 112-251, gnl|fr1|chrUn (33660893-33661035) | |
| 112-251, gnl|hg17|chr3 (195872019-195872164) | |
| 112-251, gnl|Hg17|chr3 (195872180-195872030) | |
| 112-251, gnl|loxAfr1|scaffold_61090 (7001-6856) | |
| 112-251, gnl|mm7|chr16 (30259553-30259698) | |
| 112-251, gnl|Mm7|chr16 (30259703-30259564) | |
| 112-251, gnl|panTro1|chr2 (199999178-199999323) | |
| 112-251, gnl|rheMac2|chr2 (186898152-186898297) | |
| 112-251, gnl|rn3|chr11 (72086065-72085920) | |
| 112-251, gnl|tetNig1|chr1 (12368529-12368661) | |
| 112-251, gnl|xenTro1|scaffold_344 (171095-171240) | |
| 602-780, gnl|bosTau2|chr1 (43665997-43666175) | |
| 602-780, gnl|Hg17|chr3 (195861160-195860982) | |
| 602-780, gnl|Mm7|chr16 (30247385-30247207) | |
| 793-898, gnl|bosTau2|chr1 (43671121-43671226) | |
| 793-898, gnl|Hg17|chr3 (195855155-195855032) | |
| 793-898, gnl|Mm7|chr16 (30245538-30245439) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 112-251, gnl|bosTau2|chr1 (43658305-43658444) | |
| 112-251, gnl|canFam2|chr33 (34133161-34133016) | |
| 112-251, gnl|danRer3|chr15 (4148523-4148664) | |
| 112-251, gnl|echTel1|scaffold_83906 (1612-1750) | |
| 112-251, gnl|fr1|chrUn (33660893-33661035) | |
| 112-251, gnl|hg17|chr3 (195872019-195872164) | |
| 112-251, gnl|Hg17|chr3 (195872180-195872030) | |
| 112-251, gnl|loxAfr1|scaffold_61090 (7001-6856) | |
| 112-251, gnl|mm7|chr16 (30259553-30259698) | |
| 112-251, gnl|Mm7|chr16 (30259703-30259564) | |
| 112-251, gnl|panTro1|chr2 (199999178-199999323) | |
| 112-251, gnl|rheMac2|chr2 (186898152-186898297) | |
| 112-251, gnl|rn3|chr11 (72086065-72085920) | |
| 112-251, gnl|tetNig1|chr1 (12368529-12368661) | |
| 112-251, gnl|xenTro1|scaffold_344 (171095-171240) | |
| 602-780, gnl|bosTau2|chr1 (43665997-43666175) | |
| 602-780, gnl|Hg17|chr3 (195861160-195860982) | |
| 602-780, gnl|Mm7|chr16 (30247385-30247207) | |
| 793-898, gnl|bosTau2|chr1 (43671121-43671226) | |
| 793-898, gnl|Hg17|chr3 (195855155-195855032) | |
| 793-898, gnl|Mm7|chr16 (30245538-30245439) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| ebs (0.473205) | |
| cje (0.165235) | |
| eli (0.151814) | |
| spl (0.143184) | |
| eep (0.122564) | |
| eru (0.120048) | |
| cty (0.10408) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ebs (0.473205) | |
| cje (0.165235) | |
| eli (0.151814) | |
| spl (0.143184) | |
| eep (0.122564) | |
| eru (0.120048) | |
| cty (0.10408) |