Ss1.1-Pey1-14A11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCTAATGGGCAAGAACGTTGGCTCTTCTGATCCTGAGCATACGTCAAGTTCCTCCCTCA TGATTATTTTTAAGATCTCTTGCTGATGTGATGCTGCCTCTTAGATGCACCACCAGTATA AAGCTTGACTGAGAAAGAACAACCCTCCCTCTTGGTTCCATGCCAGACTGGTTTCTCAGC TTTAGTTGTTTCTTAGTGCTCTATGGTCATGCCACACTGTGGCTTGAATCAGGAAACTGT TCATATTCTTCCTTTTTCTGTGTCCCTATTCACCTTGTAATATTCTATTTTAGGTTGTTA TGTAGTAGTTGCCTGGGTAGCCTGTTTTCCTCTGTTTTCTTTGTGTCAAGCTCAATGTCG TTTTGTGATGAGCACTGCTTTAGAACTGGCAGACCTTAGAAGAGACTTCAGCAAGCTGTC CTAGGGTAGGGGCCATATTTCTTTGTTTTGTACTAGTGACATGAGAGGATGCCTTGTAAC TGCTCTTTGATAATGGTAGTGGTAACGAACTCATTCGTGTAAAACATGATATGCCTGTTA GTTTGGGGCACCCGAGGCTCAGTAGAGGTTTATGTGATGCCTTTTTCCCCTTCCTCTTTG TGTCGTGAAGAAGCTAATATCTAGCACAGCAGAGTCAGTGTTCTGCTGCTGTCTCCTGTA GAGGGGTAGACATGTTCTCTGAGCATACCTGGTAGGGCTGGTGGGGCTTTAGAATTAGTG TCGAGACTCACAAATCCTCCACGTGCTCTTGTGATCCTAAAACAAGAGGAAAGCCATTTA CTTTTGTCAGTACTTTCTGAGAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCTAATGGGCAAGAACGTTGGCTCTTCTGATCCTGAGCATACGTCAAGTTCCTCCCTCA TGATTATTTTTAAGATCTCTTGCTGATGTGATGCTGCCTCTTAGATGCACCACCAGTATA AAGCTTGACTGAGAAAGAACAACCCTCCCTCTTGGTTCCATGCCAGACTGGTTTCTCAGC TTTAGTTGTTTCTTAGTGCTCTATGGTCATGCCACACTGTGGCTTGAATCAGGAAACTGT TCATATTCTTCCTTTTTCTGTGTCCCTATTCACCTTGTAATATTCTATTTTAGGTTGTTA TGTAGTAGTTGCCTGGGTAGCCTGTTTTCCTCTGTTTTCTTTGTGTCAAGCTCAATGTCG TTTTGTGATGAGCACTGCTTTAGAACTGGCAGACCTTAGAAGAGACTTCAGCAAGCTGTC CTAGGGTAGGGGCCATATTTCTTTGTTTTGTACTAGTGACATGAGAGGATGCCTTGTAAC TGCTCTTTGATAATGGTAGTGGTAACGAACTCATTCGTGTAAAACATGATATGCCTGTTA GTTTGGGGCACCCGAGGCTCAGTAGAGGTTTATGTGATGCCTTTTTCCCCTTCCTCTTTG TGTCGTGAAGAAGCTAATATCTAGCACAGCAGAGTCAGTGTTCTGCTGCTGTCTCCTGTA GAGGGGTAGACATGTTCTCTGAGCATACCTGGTAGGGCTGGTGGGGCTTTAGAATTAGTG TCGAGACTCACAAATCCTCCACGTGCTCTTGTGATCCTAAAACAAGAGGAAAGCCATTTA CTTTTGTCAGTACTTTCTGAGAGA |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 2-753, gnl|bosTau2|chr1 (89175976-89176723) | |
| 2-753, gnl|canFam2|chr31 (36379658-36380354) | |
| 2-753, gnl|canFam2|chr31 (36379656-36380344) | |
| 2-753, gnl|dasNov1|scaffold_111275 (747-7) | |
| 2-753, gnl|dasNov1|scaffold_111275 (749-18) | |
| 2-753, gnl|echTel1|scaffold_303773 (5046-5757) | |
| 2-753, gnl|echTel1|scaffold_303773 (5044-5747) | |
| 2-753, gnl|hg17|chr12 (88814234-88814934) | |
| 2-753, gnl|Hg17|chr21 (39591614-39590834) | |
| 2-753, gnl|hg17|chr7 (16844532-16845239) | |
| 2-753, gnl|loxAfr1|scaffold_1015 (17163-16450) | |
| 2-753, gnl|loxAfr1|scaffold_1015 (17164-16460) | |
| 2-753, gnl|mm7|chr16 (96403642-96404255) | |
| 2-753, gnl|mm7|chr16 (96403640-96404246) | |
| 2-753, gnl|Mm7|chr16 (96404380-96403699) | |
| 2-753, gnl|monDom2|scaffold_29 (3336467-3335766) | |
| 2-753, gnl|monDom2|scaffold_29 (3336469-3335776) | |
| 2-753, gnl|oryCun1|scaffold_200109 (40855-40161) | |
| 2-753, gnl|oryCun1|scaffold_200109 (40855-40171) | |
| 2-753, gnl|panTro1|chr10 (90941736-90942432) | |
| 2-753, gnl|panTro1|chr6 (17729291-17729995) | |
| 2-753, gnl|rheMac2|chr11 (91065324-91066028) | |
| 2-753, gnl|rheMac2|chr3 (109082152-109081438) | |
| 2-753, gnl|rn3|chr11 (36425663-36426255) | |
| 2-753, gnl|rn3|chr11 (36425661-36426246) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-753, gnl|bosTau2|chr1 (89175976-89176723) | |
| 2-753, gnl|canFam2|chr31 (36379658-36380354) | |
| 2-753, gnl|canFam2|chr31 (36379656-36380344) | |
| 2-753, gnl|dasNov1|scaffold_111275 (747-7) | |
| 2-753, gnl|dasNov1|scaffold_111275 (749-18) | |
| 2-753, gnl|echTel1|scaffold_303773 (5046-5757) | |
| 2-753, gnl|echTel1|scaffold_303773 (5044-5747) | |
| 2-753, gnl|hg17|chr12 (88814234-88814934) | |
| 2-753, gnl|Hg17|chr21 (39591614-39590834) | |
| 2-753, gnl|hg17|chr7 (16844532-16845239) | |
| 2-753, gnl|loxAfr1|scaffold_1015 (17163-16450) | |
| 2-753, gnl|loxAfr1|scaffold_1015 (17164-16460) | |
| 2-753, gnl|mm7|chr16 (96403642-96404255) | |
| 2-753, gnl|mm7|chr16 (96403640-96404246) | |
| 2-753, gnl|Mm7|chr16 (96404380-96403699) | |
| 2-753, gnl|monDom2|scaffold_29 (3336467-3335766) | |
| 2-753, gnl|monDom2|scaffold_29 (3336469-3335776) | |
| 2-753, gnl|oryCun1|scaffold_200109 (40855-40161) | |
| 2-753, gnl|oryCun1|scaffold_200109 (40855-40171) | |
| 2-753, gnl|panTro1|chr10 (90941736-90942432) | |
| 2-753, gnl|panTro1|chr6 (17729291-17729995) | |
| 2-753, gnl|rheMac2|chr11 (91065324-91066028) | |
| 2-753, gnl|rheMac2|chr3 (109082152-109081438) | |
| 2-753, gnl|rn3|chr11 (36425663-36426255) | |
| 2-753, gnl|rn3|chr11 (36425661-36426246) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| kid (0.129735) | |
| ebs (0.118301) |