Ss1.1-Pey1-25C09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGCGGTGCTTAGGGACGTGCGGCTCATCAGCGCCAAGACTGGCTACGGAGTCGAAGAGT TGATCTCCGCGCTCCAGCGCTCCTGGCGCTACCGCGGCGACGTCTACCTGGTTGGCGCCA CCAACGCTGGCAAGTCCACCCTCTTCAACACGCTCCTGGAGTCCGATTACTGCATCGCCA AGGGCGCTGAGGCTATCGACAGGGCCACCATCTCCGCTTGGCCTGGTACTACATTAAACC TTCTAAAGTTTCCTATTTGCAACCCAACTCCTTACAGAATGCTTCAAAGGCAAAAAAGGC TTAAAAGAGATGCAGTTGAAGCAGAAGAAGATCTTAGTCAGCAAGAACAAAATCAACTTA ATCTCTTAAAAAAGCATGGTTATGTAGTAGGGAGAGTTGGAAGGACCTTCTCATGCTCAG AACAGAAGGAGGAAGCTGCCTTTGAGTTCGATGCCAATTCTCTTGCCTTTGACATGGGCG ATGATCCTGTTATGGTTGCTGATAAACCCACCAGACGCATAGAACTGACCCCACAAGATG TGAAAGATGCCCGCTGGTTTTATGACACCCCCGGAATTACCAAAGACAACTGTATTTTAA ATCTTCTAACAGAAAAAGAAGTAAATATTGTTTTGCCAACACAGGCCATTGTTCCAAGAA CTTTTGTGCTTCAACCAGGAATGGTTCTATTTTTGGGTGCTATAGGCCGCATAGATTTTC TGCAGGGAAACCAATCAGCTTGGTTTACAGTTGTGGCTTCCAACTTCCTTCCCGTGCACA TCACTTCCTTGGACAAGGCAGATACTGTGTATAAGAAGCACGCGGGTCACACCTTACTCA AGGTTCCAGTGGGTGGAAAAGAAAGAATGGCAGGCTTTCCTCCTCTTGTTGCTGAGGACA TCACCCTGGACGAGGGATTGGGCGAATCGGAAGCTGTGGCTGACATCAAGTTCTCCTCGG CAGGTTGGGTTGCAGTAACGCCACAGTTTAAGGACAGACTGCACCTCCGAGGCCATATGC CTCAAGGAACTTTTCTCACAGTCCGGCCCCCACTCTTGCCCCACATAGTTAACATCAAAG GACCGCGAATCCAGAGAAGTGTTGCCTATCAAACCAAGAAGCCTCCTCCCCTTGTGTACA ATGTGCAGAAAAAGAAAAAGAGGTAAATGTCCGGACTGATCTGTTCACACTGAAGAGTAA CTCTACACAACCTACAGTGTACACTGCATTGTAGTAAATGTCACTAGATGAAGCCCCTCC CACTCCCACCCTTTCAGACTACCAAGGACTGAGCCTCTTCTTAATACG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGCGGTGCTTAGGGACGTGCGGCTCATCAGCGCCAAGACTGGCTACGGAGTCGAAGAGT TGATCTCCGCGCTCCAGCGCTCCTGGCGCTACCGCGGCGACGTCTACCTGGTTGGCGCCA CCAACGCTGGCAAGTCCACCCTCTTCAACACGCTCCTGGAGTCCGATTACTGCATCGCCA AGGGCGCTGAGGCTATCGACAGGGCCACCATCTCCGCTTGGCCTGGTACTACATTAAACC TTCTAAAGTTTCCTATTTGCAACCCAACTCCTTACAGAATGCTTCAAAGGCAAAAAAGGC TTAAAAGAGATGCAGTTGAAGCAGAAGAAGATCTTAGTCAGCAAGAACAAAATCAACTTA ATCTCTTAAAAAAGCATGGTTATGTAGTAGGGAGAGTTGGAAGGACCTTCTCATGCTCAG AACAGAAGGAGGAAGCTGCCTTTGAGTTCGATGCCAATTCTCTTGCCTTTGACATGGGCG ATGATCCTGTTATGGTTGCTGATAAACCCACCAGACGCATAGAACTGACCCCACAAGATG TGAAAGATGCCCGCTGGTTTTATGACACCCCCGGAATTACCAAAGACAACTGTATTTTAA ATCTTCTAACAGAAAAAGAAGTAAATATTGTTTTGCCAACACAGGCCATTGTTCCAAGAA CTTTTGTGCTTCAACCAGGAATGGTTCTATTTTTGGGTGCTATAGGCCGCATAGATTTTC TGCAGGGAAACCAATCAGCTTGGTTTACAGTTGTGGCTTCCAACTTCCTTCCCGTGCACA TCACTTCCTTGGACAAGGCAGATACTGTGTATAAGAAGCACGCGGGTCACACCTTACTCA AGGTTCCAGTGGGTGGAAAAGAAAGAATGGCAGGCTTTCCTCCTCTTGTTGCTGAGGACA TCACCCTGGACGAGGGATTGGGCGAATCGGAAGCTGTGGCTGACATCAAGTTCTCCTCGG CAGGTTGGGTTGCAGTAACGCCACAGTTTAAGGACAGACTGCACCTCCGAGGCCATATGC CTCAAGGAACTTTTCTCACAGTCCGGCCCCCACTCTTGCCCCACATAGTTAACATCAAAG GACCGCGAATCCAGAGAAGTGTTGCCTATCAAACCAAGAAGCCTCCTCCCCTTGTGTACA ATGTGCAGAAAAAGAAAAAGAGGTAAATGTCCGGACTGATCTGTTCACACTGAAGAGTAA CTCTACACAACCTACAGTGTACACTGCATTGTAGTAAATGTCACTAGATGAAGCCCCTCC CACTCCCACCCTTTCAGACTACCAAGGACTGAGCCTCTTCTTAATACG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 1-227, gnl|bosTau2|chr6 (38087385-38087611) | |
| 1-227, gnl|canFam2|chr13 (52020280-52020485) | |
| 1-227, gnl|danRer3|chrNA (28186360-28186565) | |
| 1-227, gnl|dasNov1|scaffold_79651 (438-643) | |
| 1-227, gnl|echTel1|scaffold_134039 (214-420) | |
| 1-227, gnl|fr1|chrUn (275642863-275642658) | |
| 1-227, gnl|galGal2|chr4 (49763538-49763333) | |
| 1-227, gnl|hg17|chr4 (57683532-57683737) | |
| 1-227, gnl|Hg17|chr4 (57683760-57683534) | |
| 1-227, gnl|loxAfr1|scaffold_2805 (27621-27416) | |
| 1-227, gnl|mm7|chr5 (77240232-77240437) | |
| 1-227, gnl|Mm7|chr5 (77240460-77240234) | |
| 1-227, gnl|monDom2|scaffold_26 (20875793-20875998) | |
| 1-227, gnl|oryCun1|scaffold_165343 (7703-7498) | |
| 1-227, gnl|panTro1|chr3 (88940966-88940761) | |
| 1-227, gnl|rheMac2|chr5 (72401299-72401094) | |
| 1-227, gnl|rn3|chr14 (33109196-33108991) | |
| 1-227, gnl|tetNig1|chrUn_random (47515546-47515341) | |
| 1-227, gnl|xenTro1|scaffold_157 (191828-191623) | |
| 383-593, gnl|bosTau2|chr6 (38089303-38089516) | |
| 383-593, gnl|Hg17|chr4 (57680455-57680242) | |
| 383-593, gnl|Mm7|chr5 (77237813-77237603) | |
| 594-729, gnl|bosTau2|chr6 (38092150-38092285) | |
| 594-729, gnl|canFam2|chr13 (52014464-52014572) | |
| 594-729, gnl|echTel1|scaffold_318344 (89475-89369) | |
| 594-729, gnl|fr1|chrUn (275645749-275645641) | |
| 594-729, gnl|hg17|chr4 (57675466-57675574) | |
| 594-729, gnl|Hg17|chr4 (57675609-57675474) | |
| 594-729, gnl|loxAfr1|scaffold_2805 (33952-33844) | |
| 594-729, gnl|mm7|chr5 (77235503-77235611) | |
| 594-729, gnl|Mm7|chr5 (77235646-77235511) | |
| 594-729, gnl|monDom2|scaffold_26 (20872161-20872271) | |
| 594-729, gnl|oryCun1|scaffold_210123 (46083-45975) | |
| 594-729, gnl|panTro1|chr3 (88949064-88948956) | |
| 594-729, gnl|rheMac2|chr5 (72408671-72408563) | |
| 594-729, gnl|rn3|chr14 (33113573-33113466) | |
| 594-729, gnl|tetNig1|chrUn_random (47516535-47516438) | |
| 594-729, gnl|xenTro1|scaffold_157 (204862-204754) | |
| 962-1305, gnl|bosTau2|chr6 (38095509-38095847) | |
| 962-1305, gnl|Hg17|chr4 (57670757-57670436) | |
| 962-1305, gnl|Mm7|chr5 (77225887-77225538) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-227, gnl|bosTau2|chr6 (38087385-38087611) | |
| 1-227, gnl|canFam2|chr13 (52020280-52020485) | |
| 1-227, gnl|danRer3|chrNA (28186360-28186565) | |
| 1-227, gnl|dasNov1|scaffold_79651 (438-643) | |
| 1-227, gnl|echTel1|scaffold_134039 (214-420) | |
| 1-227, gnl|fr1|chrUn (275642863-275642658) | |
| 1-227, gnl|galGal2|chr4 (49763538-49763333) | |
| 1-227, gnl|hg17|chr4 (57683532-57683737) | |
| 1-227, gnl|Hg17|chr4 (57683760-57683534) | |
| 1-227, gnl|loxAfr1|scaffold_2805 (27621-27416) | |
| 1-227, gnl|mm7|chr5 (77240232-77240437) | |
| 1-227, gnl|Mm7|chr5 (77240460-77240234) | |
| 1-227, gnl|monDom2|scaffold_26 (20875793-20875998) | |
| 1-227, gnl|oryCun1|scaffold_165343 (7703-7498) | |
| 1-227, gnl|panTro1|chr3 (88940966-88940761) | |
| 1-227, gnl|rheMac2|chr5 (72401299-72401094) | |
| 1-227, gnl|rn3|chr14 (33109196-33108991) | |
| 1-227, gnl|tetNig1|chrUn_random (47515546-47515341) | |
| 1-227, gnl|xenTro1|scaffold_157 (191828-191623) | |
| 383-593, gnl|bosTau2|chr6 (38089303-38089516) | |
| 383-593, gnl|Hg17|chr4 (57680455-57680242) | |
| 383-593, gnl|Mm7|chr5 (77237813-77237603) | |
| 594-729, gnl|bosTau2|chr6 (38092150-38092285) | |
| 594-729, gnl|canFam2|chr13 (52014464-52014572) | |
| 594-729, gnl|echTel1|scaffold_318344 (89475-89369) | |
| 594-729, gnl|fr1|chrUn (275645749-275645641) | |
| 594-729, gnl|hg17|chr4 (57675466-57675574) | |
| 594-729, gnl|Hg17|chr4 (57675609-57675474) | |
| 594-729, gnl|loxAfr1|scaffold_2805 (33952-33844) | |
| 594-729, gnl|mm7|chr5 (77235503-77235611) | |
| 594-729, gnl|Mm7|chr5 (77235646-77235511) | |
| 594-729, gnl|monDom2|scaffold_26 (20872161-20872271) | |
| 594-729, gnl|oryCun1|scaffold_210123 (46083-45975) | |
| 594-729, gnl|panTro1|chr3 (88949064-88948956) | |
| 594-729, gnl|rheMac2|chr5 (72408671-72408563) | |
| 594-729, gnl|rn3|chr14 (33113573-33113466) | |
| 594-729, gnl|tetNig1|chrUn_random (47516535-47516438) | |
| 594-729, gnl|xenTro1|scaffold_157 (204862-204754) | |
| 962-1305, gnl|bosTau2|chr6 (38095509-38095847) | |
| 962-1305, gnl|Hg17|chr4 (57670757-57670436) | |
| 962-1305, gnl|Mm7|chr5 (77225887-77225538) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbl (0.114797) |