Non-Coding RNA Search

Ss1.1-Pey1-26G06.5

Sequence:


               
               GACCCTTTGCTGGTGTCATTCATATATTTCAGCATTTATCCAGACAAACTATCAAGTATA
AACCATAAATAACAGTAGAAAATGTCAAATTATCAGTGGGCACTATATTAAAATTACATT
ATAACTTTCAAGTATTTTTACTGTGTTTTTATCATATTAAGTTTAGATCAAATTTCCTTT
ATGGCCAGGATTTATCTGTTGTACCATCTTTTGGTGTAGGCAATCCATGATTAATTAGTG
TTAGTTTTACACTCATGTATATTTAGGAGTAACATTTTTTTAGTATTAGACTTCTCTAAA
GCTGAAGTGCTAATAATTAAGATTTCATTTATATCCTACTCATGAAGAAAAAGTATAATT
AATACCTTTTAAAAACAAACTTCTTTGGTATCTAAAAGCTTATTTGGGGAATTTCTAACT
TTTAAAATGAAAATCTGCTACTTTTCTGCAAGTACTTGTGAAAGTCATTTTAATTTTTTA
AAAAATTTAGCCCTTTAATTTCTAAATATATTTAGTGCATTTATTCATAAAATTTTCATT
CTGGAATTTAGCGCTTATTCAAATGTAATCCATGTACATAGATGTAGTGGGAACTGTTGT
GCTGTATTTATTGCTTGTATAATTTTTTTAAAATGTGAACTTATTTTTATTTTCTCTTGG
TTTTAATATGCTAATGGAAACCACCATGTCTTTTATTTCTAAAACATATTCAAGATATTC
TGATCAATTTAAAAAACTCATATTATGCCTACTTAATGTATATCTCTATATTTTTACTGT
ATGAAAATATTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACCCTTTGCTGGTGTCATTCATATATTTCAGCATTTATCCAGACAAACTATCAAGTATA
AACCATAAATAACAGTAGAAAATGTCAAATTATCAGTGGGCACTATATTAAAATTACATT
ATAACTTTCAAGTATTTTTACTGTGTTTTTATCATATTAAGTTTAGATCAAATTTCCTTT
ATGGCCAGGATTTATCTGTTGTACCATCTTTTGGTGTAGGCAATCCATGATTAATTAGTG
TTAGTTTTACACTCATGTATATTTAGGAGTAACATTTTTTTAGTATTAGACTTCTCTAAA
GCTGAAGTGCTAATAATTAAGATTTCATTTATATCCTACTCATGAAGAAAAAGTATAATT
AATACCTTTTAAAAACAAACTTCTTTGGTATCTAAAAGCTTATTTGGGGAATTTCTAACT
TTTAAAATGAAAATCTGCTACTTTTCTGCAAGTACTTGTGAAAGTCATTTTAATTTTTTA
AAAAATTTAGCCCTTTAATTTCTAAATATATTTAGTGCATTTATTCATAAAATTTTCATT
CTGGAATTTAGCGCTTATTCAAATGTAATCCATGTACATAGATGTAGTGGGAACTGTTGT
GCTGTATTTATTGCTTGTATAATTTTTTTAAAATGTGAACTTATTTTTATTTTCTCTTGG
TTTTAATATGCTAATGGAAACCACCATGTCTTTTATTTCTAAAACATATTCAAGATATTC
TGATCAATTTAAAAAACTCATATTATGCCTACTTAATGTATATCTCTATATTTTTACTGT
ATGAAAATATTA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               4-792, gnl|bosTau2|chr2 (4484814-4485600)
               

               
               4-792, gnl|Hg17|chr2 (188034332-188033545)
               

               
               4-792, gnl|Mm7|chr2 (84175144-84174448)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-792, gnl|bosTau2|chr2 (4484814-4485600)
               

               
               4-792, gnl|Hg17|chr2 (188034332-188033545)
               

               
               4-792, gnl|Mm7|chr2 (84175144-84174448)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               bfe (0.299715)
               

               
               ret (0.128733)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bfe (0.299715)
               

               
               ret (0.128733)

	4-792, gnl\|bosTau2\|chr2 (4484814-4485600)
	4-792, gnl\|Hg17\|chr2 (188034332-188033545)
	4-792, gnl\|Mm7\|chr2 (84175144-84174448)