Non-Coding RNA Search

Ss1.1-Pey1-28C11.5

Sequence:


               
               CTAGAAAGGATCCAACCACAGCAGAGGGAGCACTTAGCCAAGAGTCAGAGCAGAAATGGA
GAGCCTCGAGGAGAGAGACAGACCGAGGGGGGCCCTGGGGGGGCTCTGGGGTCACCTCAT
TCAGTCCCCCGCCTGCAGGCCAGGCCATCTCTCTGGGCTTCCACAAGAGCCACACAGCCT
CCCCTTGGGCTGGGCAATGTGACAAGCAGGCCTGGGCAGGGAAGTCCCCAGGCTCCAGGA
AGCCGGGCCCTGCCTGAGAGGGTACTACTCAGATGGAACCAGAGGAAGCTGCTCCGCGCC
CGCTGAGCCTGCCCCCTGCCTGGGGAGGGCTCTCCCTCCCCTCCTCCCCAGCCTCTGGTC
TGGCCAGAGGGGGACTTCAGGGACCCCTGCACTTGCTGAGGGCACCCATCAGGTGCCCAG
TCCCTTCAAGCCTGTCTTCACCCTGGAACGGTGGGGAAGCCCTGGGGCTCCCTTTCCCTC
CCAGCATCCAAGAGTAAGCTGGGCTGTGGAGAAGCCAGACACCAAAGCAAGAAAGCAAGA
AGCTGGATTTTTAATTTTCTCTTTTTAATAAAAAGGCACCTATAAAACAGGTCAATACAG
TACAGGCAGCACAGAGACCCCCGGAACAAGCCTAAAAATTGTTTCAAAATAAAAACCAAG
AAGATGTCTTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTAGAAAGGATCCAACCACAGCAGAGGGAGCACTTAGCCAAGAGTCAGAGCAGAAATGGA
GAGCCTCGAGGAGAGAGACAGACCGAGGGGGGCCCTGGGGGGGCTCTGGGGTCACCTCAT
TCAGTCCCCCGCCTGCAGGCCAGGCCATCTCTCTGGGCTTCCACAAGAGCCACACAGCCT
CCCCTTGGGCTGGGCAATGTGACAAGCAGGCCTGGGCAGGGAAGTCCCCAGGCTCCAGGA
AGCCGGGCCCTGCCTGAGAGGGTACTACTCAGATGGAACCAGAGGAAGCTGCTCCGCGCC
CGCTGAGCCTGCCCCCTGCCTGGGGAGGGCTCTCCCTCCCCTCCTCCCCAGCCTCTGGTC
TGGCCAGAGGGGGACTTCAGGGACCCCTGCACTTGCTGAGGGCACCCATCAGGTGCCCAG
TCCCTTCAAGCCTGTCTTCACCCTGGAACGGTGGGGAAGCCCTGGGGCTCCCTTTCCCTC
CCAGCATCCAAGAGTAAGCTGGGCTGTGGAGAAGCCAGACACCAAAGCAAGAAAGCAAGA
AGCTGGATTTTTAATTTTCTCTTTTTAATAAAAAGGCACCTATAAAACAGGTCAATACAG
TACAGGCAGCACAGAGACCCCCGGAACAAGCCTAAAAATTGTTTCAAAATAAAAACCAAG
AAGATGTCTTCA

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               108-322, gnl|bosTau2|chr15 (16873041-16872823)
               


               
               433-672, gnl|bosTau2|chr15 (16872666-16872432)
               

               
               433-672, gnl|Hg17|chr11 (118271938-118272181)
               

               
               433-672, gnl|Mm7|chr9 (44446362-44446132)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               108-322, gnl|bosTau2|chr15 (16873041-16872823)
               


               
               433-672, gnl|bosTau2|chr15 (16872666-16872432)
               

               
               433-672, gnl|Hg17|chr11 (118271938-118272181)
               

               
               433-672, gnl|Mm7|chr9 (44446362-44446132)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	108-322, gnl\|bosTau2\|chr15 (16873041-16872823)

	433-672, gnl\|bosTau2\|chr15 (16872666-16872432)
	433-672, gnl\|Hg17\|chr11 (118271938-118272181)
	433-672, gnl\|Mm7\|chr9 (44446362-44446132)