Non-Coding RNA Search

Ss1.1-Pey1-29B01.5

Sequence:


               
               AGAATCTTCAGCGCAATTATCAAATGAGGAGGAGCATTTAGATAGCACCCATGGTTCAGT
CCATTCTTTAGATGCAGACTTACTGTTGCCATCTGGGGATCCATTCAGTAAATCAGACAA
TGACATGTTTAAAGAAGGACTCAGGAGAGCACAGTCTACAGACAGCTTGGGAACCTCAGG
CTCACTGCAATCCAAAGCTTTAGGCTATAACTACAAAGCAAAATCTGCTGGAAACCTGGA
CGAATCAGATTTTGGACCATTAGTAGGAGCAGATTCGGTGTCTGAGAACTTTGATACGGC
CTCCCTTGGGTCATTGCAAATGCCAAGTGGGTTTATGTTAACCAAAGATCAGGAACGAGC
AATCAAGGCGATGACCCCAGAACAAGAAGAGACGGCATCTCTCCTCTCTAGTGTCACGCA
GGGCGTGGAAAGTGCCTACGTGTCCCCCAGTGGTTACCGCTTAGTCAGTGAGACGGAATG
GAATCTCCTGCAGAAAGAGGTACATAATGCTGGAAATAAACTTGGGAGACGTTGTGATAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAATCTTCAGCGCAATTATCAAATGAGGAGGAGCATTTAGATAGCACCCATGGTTCAGT
CCATTCTTTAGATGCAGACTTACTGTTGCCATCTGGGGATCCATTCAGTAAATCAGACAA
TGACATGTTTAAAGAAGGACTCAGGAGAGCACAGTCTACAGACAGCTTGGGAACCTCAGG
CTCACTGCAATCCAAAGCTTTAGGCTATAACTACAAAGCAAAATCTGCTGGAAACCTGGA
CGAATCAGATTTTGGACCATTAGTAGGAGCAGATTCGGTGTCTGAGAACTTTGATACGGC
CTCCCTTGGGTCATTGCAAATGCCAAGTGGGTTTATGTTAACCAAAGATCAGGAACGAGC
AATCAAGGCGATGACCCCAGAACAAGAAGAGACGGCATCTCTCCTCTCTAGTGTCACGCA
GGGCGTGGAAAGTGCCTACGTGTCCCCCAGTGGTTACCGCTTAGTCAGTGAGACGGAATG
GAATCTCCTGCAGAAAGAGGTACATAATGCTGGAAATAAACTTGGGAGACGTTGTGATAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               30-501, gnl|bosTau2|chr19 (15120984-15121455)
               

               
               30-501, gnl|Hg17|chr17 (5205225-5205696)
               

               
               30-501, gnl|Mm7|chr11 (70998887-70999358)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               30-501, gnl|bosTau2|chr19 (15120984-15121455)
               

               
               30-501, gnl|Hg17|chr17 (5205225-5205696)
               

               
               30-501, gnl|Mm7|chr11 (70998887-70999358)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               clu (0.119646)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.119646)

	30-501, gnl\|bosTau2\|chr19 (15120984-15121455)
	30-501, gnl\|Hg17\|chr17 (5205225-5205696)
	30-501, gnl\|Mm7\|chr11 (70998887-70999358)