Ss1.1-Pey1-35C06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCCAGCGTTCATTGTATGTATCCAGGTGGAGGATAGAAATCAGGCAGCCCACTCTGCCAG GGAAGAAGCCAAGCCTTGGCTGCATAAATTAAAGGAGGCAATTTCGGCACAACGGAATCT CCAGACTATAAATACTGAGTTAGTGAACACTTGCCAGACATTGGAGCAGAAAACAAGAAA ACCGAAAACAACAGTTGAGTCACTGAGAACAAAGTTAATTCAAGGACAACTCCATGGCTT GCTGTTTCAGAGCTCTTTAGACGAGGAATTTCCTCCTTACTATCCCTTTTGCTGCACAGA TAGAATTCCTCACCTGCTCCAGGAACAGTTGAAGCAGTGTGGCCCAAAACGATATAGTGG TCAAGAAGCAAGAATACATCAGCGACCCCTGACCTTCAAACACACATGCTGGTACACACC TCTGCTGGATGCCTTGCATCTGGATAGTTTTACAGCAGTTCCAAGACTGGAATTGACACC TTTCTCCTGTGTAGCCAACCAAATCCATGCTTCCTGTGAAAGGCCCAAAGATGGAGAAAT AGAGGATGGCAATTTGGATGTGACTAGAACACACAAGTGCCCAGGCCCTACAGCCGGCCC CCCCCCAGGAACAGATTTTCCAGGTTGCATCAGGATGAGTAATGACCCAAGTATGGAAGA GGATGGTGTTGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCCAGCGTTCATTGTATGTATCCAGGTGGAGGATAGAAATCAGGCAGCCCACTCTGCCAG GGAAGAAGCCAAGCCTTGGCTGCATAAATTAAAGGAGGCAATTTCGGCACAACGGAATCT CCAGACTATAAATACTGAGTTAGTGAACACTTGCCAGACATTGGAGCAGAAAACAAGAAA ACCGAAAACAACAGTTGAGTCACTGAGAACAAAGTTAATTCAAGGACAACTCCATGGCTT GCTGTTTCAGAGCTCTTTAGACGAGGAATTTCCTCCTTACTATCCCTTTTGCTGCACAGA TAGAATTCCTCACCTGCTCCAGGAACAGTTGAAGCAGTGTGGCCCAAAACGATATAGTGG TCAAGAAGCAAGAATACATCAGCGACCCCTGACCTTCAAACACACATGCTGGTACACACC TCTGCTGGATGCCTTGCATCTGGATAGTTTTACAGCAGTTCCAAGACTGGAATTGACACC TTTCTCCTGTGTAGCCAACCAAATCCATGCTTCCTGTGAAAGGCCCAAAGATGGAGAAAT AGAGGATGGCAATTTGGATGTGACTAGAACACACAAGTGCCCAGGCCCTACAGCCGGCCC CCCCCCAGGAACAGATTTTCCAGGTTGCATCAGGATGAGTAATGACCCAAGTATGGAAGA GGATGGTGTTGA |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 1-188, gnl|bosTau2|chr5 (51856581-51856394) | |
| 1-188, gnl|canFam2|chr27 (25438637-25437950) | |
| 1-188, gnl|dasNov1|scaffold_16559 (50003-49384) | |
| 1-188, gnl|echTel1|scaffold_281607 (46307-45655) | |
| 1-188, gnl|galGal2|chr1 (63736804-63737456) | |
| 1-188, gnl|hg17|chr12 (25096434-25097110) | |
| 1-188, gnl|Hg17|chr12 (25096970-25097157) | |
| 1-188, gnl|mm7|chr6 (145212329-145212926) | |
| 1-188, gnl|Mm7|chr6 (145212813-145212968) | |
| 1-188, gnl|monDom2|scaffold_31 (527989-527336) | |
| 1-188, gnl|oryCun1|scaffold_210328 (68724-68085) | |
| 1-188, gnl|panTro1|chrUn_random (51496923-51497599) | |
| 1-188, gnl|rheMac2|chr11 (25328529-25329204) | |
| 1-188, gnl|rn3|chr4 (183013677-183014311) | |
| 428-578, gnl|bosTau2|chr5 (51845077-51844927) | |
| 428-578, gnl|canFam2|chr27 (25425391-25425172) | |
| 428-578, gnl|dasNov1|scaffold_40547 (6783-6559) | |
| 428-578, gnl|echTel1|scaffold_281607 (32046-31834) | |
| 428-578, gnl|hg17|chr12 (25110500-25110724) | |
| 428-578, gnl|Hg17|chr12 (25110565-25110715) | |
| 428-578, gnl|loxAfr1|scaffold_1796 (12662-12868) | |
| 428-578, gnl|mm7|chr6 (145228261-145228479) | |
| 428-578, gnl|Mm7|chr6 (145228321-145228471) | |
| 428-578, gnl|monDom2|scaffold_31 (512460-512240) | |
| 428-578, gnl|oryCun1|scaffold_209042 (41592-41817) | |
| 428-578, gnl|panTro1|chrUn_random (51510975-51511199) | |
| 428-578, gnl|rheMac2|chr11 (25342808-25343032) | |
| 428-578, gnl|rn3|chr4 (183028909-183029137) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-188, gnl|bosTau2|chr5 (51856581-51856394) | |
| 1-188, gnl|canFam2|chr27 (25438637-25437950) | |
| 1-188, gnl|dasNov1|scaffold_16559 (50003-49384) | |
| 1-188, gnl|echTel1|scaffold_281607 (46307-45655) | |
| 1-188, gnl|galGal2|chr1 (63736804-63737456) | |
| 1-188, gnl|hg17|chr12 (25096434-25097110) | |
| 1-188, gnl|Hg17|chr12 (25096970-25097157) | |
| 1-188, gnl|mm7|chr6 (145212329-145212926) | |
| 1-188, gnl|Mm7|chr6 (145212813-145212968) | |
| 1-188, gnl|monDom2|scaffold_31 (527989-527336) | |
| 1-188, gnl|oryCun1|scaffold_210328 (68724-68085) | |
| 1-188, gnl|panTro1|chrUn_random (51496923-51497599) | |
| 1-188, gnl|rheMac2|chr11 (25328529-25329204) | |
| 1-188, gnl|rn3|chr4 (183013677-183014311) | |
| 428-578, gnl|bosTau2|chr5 (51845077-51844927) | |
| 428-578, gnl|canFam2|chr27 (25425391-25425172) | |
| 428-578, gnl|dasNov1|scaffold_40547 (6783-6559) | |
| 428-578, gnl|echTel1|scaffold_281607 (32046-31834) | |
| 428-578, gnl|hg17|chr12 (25110500-25110724) | |
| 428-578, gnl|Hg17|chr12 (25110565-25110715) | |
| 428-578, gnl|loxAfr1|scaffold_1796 (12662-12868) | |
| 428-578, gnl|mm7|chr6 (145228261-145228479) | |
| 428-578, gnl|Mm7|chr6 (145228321-145228471) | |
| 428-578, gnl|monDom2|scaffold_31 (512460-512240) | |
| 428-578, gnl|oryCun1|scaffold_209042 (41592-41817) | |
| 428-578, gnl|panTro1|chrUn_random (51510975-51511199) | |
| 428-578, gnl|rheMac2|chr11 (25342808-25343032) | |
| 428-578, gnl|rn3|chr4 (183028909-183029137) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| spl (0.286369) | |
| jca (0.11396) |