Non-Coding RNA Search

Ss1.1-Pey1-44A05.5

Sequence:


               
               CACTTGCCTAATATGGGAAGGAATTTGTACAATTCAACGTTAACTGAAGGTGAATTAGTG
TCCTGCATCTCCGCGTATTTGAAGTGTTTAGAGTGCCTGCCATTGCTGTGTGAAAGGAGC
TCTCTGATCTGTATGTACAGTAGTAATACTTTTCTTGAAATGTCGCTTTTATGGATGACA
TTTTCCTCTTTCTCCTTGATGTTTTTCTGTGTCGTGCTAGGTAATTGGTAGATGTATGGT
GTGTTTACTAAATTTAGGCTTCCTCTTTGTTTTGATTTTGTTCGGTGGAGTCGGCTTTCC
TTCCTGACCTTCCACAAAAGTTATTTAGTTTGCATCTATCTTTGTGGATTTGATGATCCC
TGATTTGATTATGAAAGTGTCATTTGCAGCTTTCAGGTTTTCTCATCAAAGGTCACATAT
TTTCTAATCGCATTTACTCCCCCACCAGAGAGATACACACATCTACTCGGCCTCAGCAGT
TTTCTGTGGCAGTCTGTAGTTAGTTCCTTAGAACTTTGTCAGGAGTGACTTTGAACAAAG
TGCTTACTAGAGCCTAAAAGCTGCTTTATGCTGCATAGTCTGGCCTTTGCACTAGCAGAT
CATTGCTGGTCTAGGTCAGTTTAGAGACTTTTTCTATATTAATGCCTCCTGATAATGTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACTTGCCTAATATGGGAAGGAATTTGTACAATTCAACGTTAACTGAAGGTGAATTAGTG
TCCTGCATCTCCGCGTATTTGAAGTGTTTAGAGTGCCTGCCATTGCTGTGTGAAAGGAGC
TCTCTGATCTGTATGTACAGTAGTAATACTTTTCTTGAAATGTCGCTTTTATGGATGACA
TTTTCCTCTTTCTCCTTGATGTTTTTCTGTGTCGTGCTAGGTAATTGGTAGATGTATGGT
GTGTTTACTAAATTTAGGCTTCCTCTTTGTTTTGATTTTGTTCGGTGGAGTCGGCTTTCC
TTCCTGACCTTCCACAAAAGTTATTTAGTTTGCATCTATCTTTGTGGATTTGATGATCCC
TGATTTGATTATGAAAGTGTCATTTGCAGCTTTCAGGTTTTCTCATCAAAGGTCACATAT
TTTCTAATCGCATTTACTCCCCCACCAGAGAGATACACACATCTACTCGGCCTCAGCAGT
TTTCTGTGGCAGTCTGTAGTTAGTTCCTTAGAACTTTGTCAGGAGTGACTTTGAACAAAG
TGCTTACTAGAGCCTAAAAGCTGCTTTATGCTGCATAGTCTGGCCTTTGCACTAGCAGAT
CATTGCTGGTCTAGGTCAGTTTAGAGACTTTTTCTATATTAATGCCTCCTGATAATGTTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-659, gnl|bosTau2|chr5 (26430271-26430925)
               

               
               1-659, gnl|Hg17|chr12 (47371293-47370624)
               

               
               1-659, gnl|Mm7|chr15 (98527381-98526771)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-659, gnl|bosTau2|chr5 (26430271-26430925)
               

               
               1-659, gnl|Hg17|chr12 (47371293-47370624)
               

               
               1-659, gnl|Mm7|chr15 (98527381-98526771)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	1-659, gnl\|bosTau2\|chr5 (26430271-26430925)
	1-659, gnl\|Hg17\|chr12 (47371293-47370624)
	1-659, gnl\|Mm7\|chr15 (98527381-98526771)